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EnsemblEnsembl Home
Description

deleted in lymphocytic leukemia 1 [Source:HGNC Symbol;Acc:HGNC:13747]

Gene Synonyms

BCMS, BCMS1, DLB1, LEU1, LINC00021, NCRNA00021, XTP6

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
DLEU1-230ENST00000490577.52440No protein-
 
lncRNA
--Ensembl CanonicalTSL:5
DLEU1-236ENST00000650910.15265No protein-
 
lncRNA
--GENCODE basic
DLEU1-240ENST00000658634.13789No protein-
 
lncRNA
--GENCODE basic
DLEU1-243ENST00000671384.13216No protein-
 
lncRNA
--GENCODE basic
DLEU1-212ENST00000469754.32957No protein-
 
lncRNA
--GENCODE basicTSL:1
DLEU1-239ENST00000655550.12888No protein-
 
lncRNA
---
DLEU1-242ENST00000668174.11926No protein-
 
lncRNA
--GENCODE basic
DLEU1-201ENST00000413510.41807No protein-
 
lncRNA
--GENCODE basicTSL:1
DLEU1-226ENST00000484869.61652No protein-
 
lncRNA
--GENCODE basicTSL:5
DLEU1-210ENST00000469095.61596No protein-
 
lncRNA
--GENCODE basicTSL:5
DLEU1-241ENST00000659280.21487No protein-
 
lncRNA
---
DLEU1-207ENST00000467721.51455No protein-
 
lncRNA
--TSL:5
DLEU1-233ENST00000491615.51451No protein-
 
lncRNA
--GENCODE basicTSL:5
DLEU1-222ENST00000483169.61304No protein-
 
lncRNA
--TSL:2
DLEU1-235ENST00000647700.11302No protein-
 
lncRNA
--GENCODE basic
DLEU1-217ENST00000474630.61187No protein-
 
lncRNA
--TSL:5
DLEU1-209ENST00000468522.51158No protein-
 
lncRNA
--TSL:5
DLEU1-231ENST00000491341.51141No protein-
 
lncRNA
--TSL:5
DLEU1-204ENST00000462427.21120No protein-
 
lncRNA
--TSL:1
DLEU1-214ENST00000470726.71051No protein-
 
lncRNA
--TSL:5
DLEU1-206ENST00000463474.71047No protein-
 
lncRNA
--TSL:1
DLEU1-202ENST00000460525.61031No protein-
 
lncRNA
--TSL:1
DLEU1-208ENST00000468168.5982No protein-
 
lncRNA
--TSL:1
DLEU1-203ENST00000461527.7918No protein-
 
lncRNA
--TSL:1
DLEU1-237ENST00000650996.1871No protein-
 
lncRNA
---
DLEU1-219ENST00000476738.5838No protein-
 
lncRNA
--TSL:5
DLEU1-229ENST00000489542.6780No protein-
 
lncRNA
--TSL:1
DLEU1-238ENST00000652753.1754No protein-
 
lncRNA
--GENCODE basic
DLEU1-227ENST00000485007.5736No protein-
 
lncRNA
--TSL:5
DLEU1-215ENST00000472136.5720No protein-
 
lncRNA
--TSL:1
DLEU1-213ENST00000470593.5668No protein-
 
lncRNA
--TSL:1
DLEU1-234ENST00000498557.5639No protein-
 
lncRNA
--TSL:1
DLEU1-221ENST00000479420.5612No protein-
 
lncRNA
--TSL:5
DLEU1-220ENST00000478860.5602No protein-
 
lncRNA
--TSL:1
DLEU1-216ENST00000473075.3583No protein-
 
lncRNA
--GENCODE basicTSL:5
DLEU1-218ENST00000475913.5534No protein-
 
lncRNA
--TSL:1
DLEU1-228ENST00000486895.5481No protein-
 
lncRNA
--TSL:1
DLEU1-232ENST00000491482.5431No protein-
 
lncRNA
--TSL:1
DLEU1-224ENST00000484529.5400No protein-
 
lncRNA
--TSL:1
DLEU1-225ENST00000484606.1400No protein-
 
lncRNA
--TSL:5
DLEU1-223ENST00000483444.5332No protein-
 
lncRNA
--TSL:1
DLEU1-211ENST00000469127.5320No protein-
 
lncRNA
--TSL:5
DLEU1-205ENST00000463357.5274No protein-
 
lncRNA
--TSL:1
Description

SUFU negative regulator of hedgehog signaling [Source:MGI Symbol;Acc:MGI:1345643]

Gene Synonyms

2810026F04Rik, Su(Fu), b2b273Clo

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Sufu-201ENSMUST00000039922.134522484aaENSMUSP00000049109.7
 
Protein coding
CCDS29879Q9Z0P7-1 GENCODE basicAPPRIS P3TSL:1
Sufu-202ENSMUST00000111867.91747485aaENSMUSP00000107498.3
 
Protein coding
CCDS38008Q9Z0P7-4 GENCODE basicAPPRIS ALT1TSL:1
Sufu-203ENSMUST00000118440.32681467aaENSMUSP00000113073.2
 
Protein coding
-D3Z7B6 GENCODE basicTSL:5
Sufu-204ENSMUST00000120778.81850297aaENSMUSP00000112653.2
 
Protein coding
-A0A0R4J1M0 GENCODE basicTSL:2
Sufu-207ENSMUST00000235166.21459No protein-
 
Processed transcript
---
Sufu-205ENSMUST00000123252.2334No protein-
 
Processed transcript
--TSL:2
Sufu-206ENSMUST00000144341.2394No protein-
 
Retained intron
--TSL:2
Description

VPS52 subunit of GARP complex [Source:HGNC Symbol;Acc:HGNC:10518]

Gene Synonyms

ARE1, SACM2L

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VPS52-251ENST00000441058.22960723aaENSP00000390831.2
 
Protein coding
-Q8N1B4-1 -Ensembl CanonicalGENCODE basicTSL:1
VPS52-253ENST00000471761.52602No protein-
 
Processed transcript
---TSL:2
VPS52-260ENST00000490433.11060No protein-
 
Processed transcript
---TSL:5
VPS52-261ENST00000491657.5925No protein-
 
Processed transcript
---TSL:5
VPS52-255ENST00000471922.5878No protein-
 
Processed transcript
---TSL:2
VPS52-258ENST00000479062.5743No protein-
 
Processed transcript
---TSL:1
VPS52-252ENST00000467430.1505No protein-
 
Processed transcript
---TSL:2
VPS52-259ENST00000489636.53338No protein-
 
Retained intron
---TSL:2
VPS52-257ENST00000475750.1786No protein-
 
Retained intron
---TSL:5
VPS52-256ENST00000475583.1547No protein-
 
Retained intron
---TSL:3
VPS52-254ENST00000471802.1453No protein-
 
Retained intron
---TSL:3
Description

inosine monophosphate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:6053]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
IMPDH2-201ENST00000326739.91651514aaENSP00000321584.4
 
Protein coding
CCDS2786A0A384N6C2 P12268 NM_000884.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
IMPDH2-202ENST00000429182.61751538aaENSP00000393525.2
 
Protein coding
-H0Y4R1 -GENCODE basicTSL:5
IMPDH2-232ENST00000678724.11662513aaENSP00000503874.1
 
Protein coding
---GENCODE basic
IMPDH2-217ENST00000677010.11657522aaENSP00000503089.1
 
Protein coding
---GENCODE basic
IMPDH2-203ENST00000442157.21538489aaENSP00000403502.2
 
Protein coding
-E7ETK5 -GENCODE basicTSL:2
IMPDH2-223ENST00000677480.11704123aaENSP00000504378.1
 
Nonsense mediated decay
----
IMPDH2-235ENST00000679117.1162847aaENSP00000503240.1
 
Nonsense mediated decay
----
IMPDH2-230ENST00000678177.14906No protein-
 
Retained intron
----
IMPDH2-226ENST00000677740.14351No protein-
 
Retained intron
----
IMPDH2-222ENST00000677344.14036No protein-
 
Retained intron
----
IMPDH2-218ENST00000677108.13659No protein-
 
Retained intron
----
IMPDH2-234ENST00000679019.13597No protein-
 
Retained intron
----
IMPDH2-229ENST00000678085.13325No protein-
 
Retained intron
----
IMPDH2-220ENST00000677185.13185No protein-
 
Retained intron
----
IMPDH2-215ENST00000676708.12865No protein-
 
Retained intron
----
IMPDH2-216ENST00000676864.12817No protein-
 
Retained intron
----
IMPDH2-227ENST00000677991.12758No protein-
 
Retained intron
----
IMPDH2-231ENST00000678603.12663No protein-
 
Retained intron
----
IMPDH2-236ENST00000679339.12426No protein-
 
Retained intron
----
IMPDH2-221ENST00000677205.12369No protein-
 
Retained intron
----
IMPDH2-214ENST00000676627.12315No protein-
 
Retained intron
----
IMPDH2-224ENST00000677519.12295No protein-
 
Retained intron
----
IMPDH2-204ENST00000462980.22110No protein-
 
Retained intron
---TSL:2
IMPDH2-228ENST00000678001.12078No protein-
 
Retained intron
----
IMPDH2-225ENST00000677593.12078No protein-
 
Retained intron
----
IMPDH2-219ENST00000677168.12057No protein-
 
Retained intron
----
IMPDH2-213ENST00000676607.11881No protein-
 
Retained intron
----
IMPDH2-207ENST00000472328.21749No protein-
 
Retained intron
---TSL:3
IMPDH2-233ENST00000678920.11743No protein-
 
Retained intron
----
IMPDH2-211ENST00000491610.21742No protein-
 
Retained intron
---TSL:5
IMPDH2-210ENST00000485500.1852No protein-
 
Retained intron
---TSL:3
IMPDH2-208ENST00000481274.1840No protein-
 
Retained intron
---TSL:2
IMPDH2-212ENST00000496837.1760No protein-
 
Retained intron
---TSL:2
IMPDH2-206ENST00000466147.5691No protein-
 
Retained intron
---TSL:2
IMPDH2-209ENST00000484872.1643No protein-
 
Retained intron
---TSL:2
IMPDH2-205ENST00000463903.1420No protein-
 
Retained intron
---TSL:2
Description

membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]

Gene Synonyms

AIP3, BAIAP1, BAP1, MAGI-1, TNRC19, WWP3

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
MAGI1-221ENST00000634409.143891462aaENSP00000489444.1
 
Protein coding
-Q96QZ7-2 -Ensembl CanonicalGENCODE basic
MAGI1-225ENST00000634774.174151287aaENSP00000489393.1
 
Protein coding
-Q96QZ7-5 -GENCODE basic
MAGI1-229ENST00000635039.16398980aaENSP00000489513.1
 
Protein coding
-A0A087WXD2 -GENCODE basic
MAGI1-236ENST00000635672.162251155aaENSP00000489105.1
 
Protein coding
-A0A087WT53 -GENCODE basic
MAGI1-234ENST00000635378.147911256aaENSP00000489391.1
 
Protein coding
-Q96QZ7-3 -GENCODE basic
MAGI1-232ENST00000635181.141931131aaENSP00000489326.1
 
Protein coding
-H7C4U7 -CDS 5' incomplete
MAGI1-227ENST00000634856.136941136aaENSP00000489580.1
 
Protein coding
-H7C535 -CDS 5' incomplete
MAGI1-235ENST00000635471.135551160aaENSP00000489322.1
 
Protein coding
-Q96QZ7-4 -GENCODE basic
MAGI1-223ENST00000634578.130451014aaENSP00000489478.1
 
Protein coding
-H7C5T8 -CDS 5' incomplete
MAGI1-228ENST00000634863.1556185aaENSP00000489449.1
 
Protein coding
-H7C4S7 -CDS 5' and 3' incomplete
MAGI1-219ENST00000634269.12138No protein-
 
Processed transcript
----
MAGI1-231ENST00000635089.1622No protein-
 
Processed transcript
----
MAGI1-230ENST00000635055.1589No protein-
 
Processed transcript
----
MAGI1-222ENST00000634550.1568No protein-
 
Processed transcript
----
MAGI1-224ENST00000634656.12247No protein-
 
Retained intron
----
MAGI1-220ENST00000634294.1972No protein-
 
Retained intron
----
MAGI1-226ENST00000634830.1834No protein-
 
Retained intron
----
MAGI1-233ENST00000635202.1588No protein-
 
Retained intron
----
Description

adhesion G protein-coupled receptor V1 [Source:HGNC Symbol;Acc:HGNC:17416]

Gene Synonyms

DKFZp761P0710, FEB4, GPR98, KIAA0686, MASS1, USH2C, VLGR1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ADGRV1-201ENST00000405460.9195576306aaENSP00000384582.2
 
Protein coding
CCDS47246Q8WXG9-1 NM_032119.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ADGRV1-202ENST00000425867.381412624aaENSP00000392618.3
 
Protein coding
-A0A1X7SBU6 -TSL:5CDS 5' incomplete
ADGRV1-232ENST00000640403.167232038aaENSP00000492531.1
 
Protein coding
-A0A1W2PRC7 -TSL:5CDS 3' incomplete
ADGRV1-214ENST00000638975.12467390aaENSP00000492630.1
 
Protein coding
-A0A1W2PRR5 -TSL:5CDS 5' incomplete
ADGRV1-237ENST00000640815.11522334aaENSP00000491767.1
 
Protein coding
-A0A1W2PQK7 -GENCODE basicTSL:2
ADGRV1-222ENST00000639821.1893192aaENSP00000492216.1
 
Protein coding
-A0A1W2PQP9 -GENCODE basicTSL:3
ADGRV1-206ENST00000507314.269873aaENSP00000491299.1
 
Protein coding
-A0A1W2PP32 -TSL:3CDS 5' incomplete
ADGRV1-207ENST00000508842.5582148aaENSP00000425936.1
 
Protein coding
-D6RIF0 -TSL:3CDS 3' incomplete
ADGRV1-221ENST00000639707.1564123aaENSP00000492328.1
 
Protein coding
-A0A1W2PQU5 -TSL:3CDS 3' incomplete
ADGRV1-230ENST00000640369.1500123aaENSP00000491401.1
 
Protein coding
-A0A1W2PQU5 -TSL:5CDS 3' incomplete
ADGRV1-233ENST00000640407.15673938aaENSP00000491425.1
 
Nonsense mediated decay
-A0A1W2PPA4 -TSL:5CDS 5' incomplete
ADGRV1-236ENST00000640779.14680567aaENSP00000492527.1
 
Nonsense mediated decay
-A0A1W2PR84 -TSL:5CDS 5' incomplete
ADGRV1-224ENST00000640012.1324165aaENSP00000492538.1
 
Nonsense mediated decay
-A0A1W2PS08 -TSL:5CDS 5' incomplete
ADGRV1-215ENST00000638990.1243380aaENSP00000492781.1
 
Nonsense mediated decay
-A0A1W2PS99 -TSL:5CDS 5' incomplete
ADGRV1-203ENST00000450321.287972aaENSP00000492054.1
 
Nonsense mediated decay
-A0A1W2PR51 -TSL:1CDS 5' incomplete
ADGRV1-217ENST00000639431.161199aaENSP00000491057.1
 
Nonsense mediated decay
-A0A1W2PNS5 -TSL:5CDS 5' incomplete
ADGRV1-216ENST00000639212.11167No protein-
 
Processed transcript
---TSL:5
ADGRV1-219ENST00000639530.11101No protein-
 
Processed transcript
---TSL:5
ADGRV1-228ENST00000640256.1904No protein-
 
Processed transcript
---TSL:5
ADGRV1-212ENST00000638585.1631No protein-
 
Processed transcript
---TSL:5
ADGRV1-225ENST00000640061.1584No protein-
 
Processed transcript
---TSL:4
ADGRV1-205ENST00000505845.2559No protein-
 
Processed transcript
---TSL:5
ADGRV1-218ENST00000639473.16608No protein-
 
Retained intron
---TSL:5
ADGRV1-211ENST00000638510.16503No protein-
 
Retained intron
---TSL:1
ADGRV1-231ENST00000640374.15401No protein-
 
Retained intron
---TSL:5
ADGRV1-208ENST00000509621.15211No protein-
 
Retained intron
---TSL:1
ADGRV1-204ENST00000504142.25047No protein-
 
Retained intron
---TSL:5
ADGRV1-234ENST00000640464.14505No protein-
 
Retained intron
---TSL:5
ADGRV1-220ENST00000639676.13116No protein-
 
Retained intron
---TSL:5
ADGRV1-227ENST00000640109.12906No protein-
 
Retained intron
---TSL:5
ADGRV1-210ENST00000638316.12221No protein-
 
Retained intron
---TSL:5
ADGRV1-229ENST00000640281.11466No protein-
 
Retained intron
---TSL:1
ADGRV1-226ENST00000640083.11454No protein-
 
Retained intron
---TSL:5
ADGRV1-235ENST00000640729.11360No protein-
 
Retained intron
---TSL:5
ADGRV1-213ENST00000638638.11309No protein-
 
Retained intron
---TSL:5
ADGRV1-223ENST00000639884.11177No protein-
 
Retained intron
---TSL:5
ADGRV1-209ENST00000513828.1596No protein-
 
Retained intron
---TSL:4
Description

protocadherin related 15 [Source:HGNC Symbol;Acc:HGNC:14674]

Gene Synonyms

CDHR15, DFNB23, USH1F

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
PCDH15-229ENST00000644397.293661740aaENSP00000495195.1
 
Protein coding
-A0A2R8Y6C0 NM_001384140.1MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT2
PCDH15-206ENST00000373965.692371677aaENSP00000363076.3
 
Protein coding
CCDS73135A9Z1W1 -GENCODE basicAPPRIS ALT2TSL:5
PCDH15-205ENST00000373957.770321962aaENSP00000363068.4
 
Protein coding
CCDS73137A2A3D8 -GENCODE basicAPPRIS ALT2TSL:5
PCDH15-202ENST00000361849.770171957aaENSP00000354950.3
 
Protein coding
CCDS44404A2A3E7 -GENCODE basicAPPRIS ALT2TSL:5
PCDH15-207ENST00000395430.570021952aaENSP00000378818.1
 
Protein coding
CCDS44403A2A3E6 -GENCODE basicAPPRIS ALT2TSL:5
PCDH15-201ENST00000320301.1169621955aaENSP00000322604.6
 
Protein coding
CCDS7248Q96QU1-1 NM_033056.4MANE Plus Clinical v0.93GENCODE basicAPPRIS P4TSL:1
PCDH15-208ENST00000395433.569421932aaENSP00000378821.1
 
Protein coding
CCDS44401A2A3E8 -GENCODE basicTSL:5
PCDH15-215ENST00000437009.568041886aaENSP00000412628.2
 
Protein coding
CCDS73134E7EM53 -GENCODE basicTSL:5
PCDH15-225ENST00000617271.464251539aaENSP00000478076.1
 
Protein coding
CCDS44400A0A087WTR6 -GENCODE basicAPPRIS ALT2TSL:5
PCDH15-211ENST00000395445.663091783aaENSP00000378832.2
 
Protein coding
CCDS86095Q96QU1-4 -GENCODE basicTSL:1
PCDH15-222ENST00000613657.562691790aaENSP00000482794.1
 
Protein coding
CCDS73138A0A087WZN9 -GENCODE basicTSL:5
PCDH15-224ENST00000616114.458461675aaENSP00000483745.1
 
Protein coding
CCDS86094Q96QU1-6 -GENCODE basicAPPRIS ALT2TSL:1
PCDH15-227ENST00000621708.457001682aaENSP00000484454.1
 
Protein coding
CCDS73136A0A087X1T6 -GENCODE basicAPPRIS ALT2TSL:5
PCDH15-203ENST00000373955.54230961aaENSP00000363066.1
 
Protein coding
CCDS86093Q96QU1-3 -GENCODE basicTSL:1
PCDH15-213ENST00000409834.554011150aaENSP00000386693.1
 
Protein coding
-B7ZBT8 -GENCODE basicTSL:5
PCDH15-228ENST00000642496.143351360aaENSP00000495930.1
 
Protein coding
-A0A2R8YEV2 -CDS 5' incomplete
PCDH15-212ENST00000395446.53948981aaENSP00000378833.1
 
Protein coding
-A2A3E4 -GENCODE basicTSL:5
PCDH15-209ENST00000395440.53177719aaENSP00000378827.1
 
Protein coding
-A2A3E5 -GENCODE basicTSL:5
PCDH15-210ENST00000395442.52970650aaENSP00000378829.1
 
Protein coding
-A2A3E1 -GENCODE basicTSL:5
PCDH15-220ENST00000495484.51896416aaENSP00000480780.1
 
Protein coding
-A0A087WX70 -GENCODE basicTSL:5
PCDH15-226ENST00000618301.41461460aaENSP00000482780.1
 
Protein coding
-A0A087WZN4 -TSL:5CDS 5' incomplete
PCDH15-223ENST00000615043.1114337aaENSP00000478551.1
 
Protein coding
-A0A087WUC7 -TSL:5CDS 5' incomplete
PCDH15-221ENST00000613346.458072aaENSP00000481211.1
 
Protein coding
-A0A087WXQ6 -TSL:4CDS 3' incomplete
PCDH15-217ENST00000458638.144892aaENSP00000394465.1
 
Protein coding
-A2A3D9 -TSL:5CDS 3' incomplete
PCDH15-216ENST00000448885.56937654aaENSP00000412320.1
 
Nonsense mediated decay
-E7EMG8 -TSL:5
PCDH15-204ENST00000373956.76931654aaENSP00000363067.4
 
Nonsense mediated decay
-E7EMG8 -TSL:5
PCDH15-214ENST00000414367.53357329aaENSP00000412531.1
 
Nonsense mediated decay
-E7EM97 -TSL:5
PCDH15-218ENST00000463095.23469No protein-
 
Processed transcript
---TSL:1
PCDH15-219ENST00000476074.5754No protein-
 
Retained intron
---TSL:3
Description

non-homologous end joining factor [Source:MGI Symbol;Acc:MGI:2442831]

Gene Synonyms

BC029214, D930050G13Rik, paralog of XRCC4 and XLF

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Paxx-201ENSMUST00000114261.9981205aaENSMUSP00000109899.3
 
Protein coding
CCDS15775Q8K0Y7 GENCODE basicAPPRIS P1TSL:1
Paxx-213ENSMUST00000151239.2592157aaENSMUSP00000120533.2
 
Protein coding
-A2AJ30 TSL:3CDS 3' incomplete
Paxx-209ENSMUST00000133919.81254No protein-
 
Processed transcript
--TSL:1
Paxx-203ENSMUST00000124172.21245No protein-
 
Processed transcript
--TSL:3
Paxx-204ENSMUST00000125710.8917No protein-
 
Processed transcript
--TSL:3
Paxx-210ENSMUST00000135915.8896No protein-
 
Processed transcript
--TSL:3
Paxx-211ENSMUST00000138079.8765No protein-
 
Processed transcript
--TSL:2
Paxx-206ENSMUST00000130130.8744No protein-
 
Processed transcript
--TSL:3
Paxx-207ENSMUST00000132561.8610No protein-
 
Processed transcript
--TSL:2
Paxx-208ENSMUST00000132596.8608No protein-
 
Processed transcript
--TSL:5
Paxx-212ENSMUST00000141613.8554No protein-
 
Processed transcript
--TSL:5
Paxx-202ENSMUST00000123986.2532No protein-
 
Processed transcript
--TSL:5
Paxx-205ENSMUST00000128560.2521No protein-
 
Processed transcript
--TSL:2
Description

Pvt1 oncogene [Source:HGNC Symbol;Acc:HGNC:9709]

Gene Synonyms

LINC00079, MIR1204HG, NCRNA00079, onco-lncRNA-100

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
PVT1-224ENST00000651587.12444No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
PVT1-293ENST00000660438.12450No protein-
 
lncRNA
--GENCODE basic
PVT1-216ENST00000523068.22255No protein-
 
lncRNA
--GENCODE basicTSL:5
PVT1-323ENST00000664995.12230No protein-
 
lncRNA
--GENCODE basic
PVT1-283ENST00000659106.12187No protein-
 
lncRNA
---
PVT1-295ENST00000660631.12161No protein-
 
lncRNA
---
PVT1-265ENST00000657449.12149No protein-
 
lncRNA
--GENCODE basic
PVT1-347ENST00000667418.12143No protein-
 
lncRNA
--GENCODE basic
PVT1-336ENST00000666147.12097No protein-
 
lncRNA
---
PVT1-254ENST00000656693.11990No protein-
 
lncRNA
--GENCODE basic
PVT1-351ENST00000668098.11985No protein-
 
lncRNA
---
PVT1-331ENST00000665856.11965No protein-
 
lncRNA
--GENCODE basic
PVT1-253ENST00000656532.11909No protein-
 
lncRNA
---
PVT1-368ENST00000670532.11840No protein-
 
lncRNA
--GENCODE basic
PVT1-294ENST00000660456.11814No protein-
 
lncRNA
---
PVT1-372ENST00000670714.11756No protein-
 
lncRNA
---
PVT1-288ENST00000659912.11744No protein-
 
lncRNA
---
PVT1-282ENST00000658840.11738No protein-
 
lncRNA
--GENCODE basic
PVT1-308ENST00000662413.11727No protein-
 
lncRNA
---
PVT1-317ENST00000664265.11720No protein-
 
lncRNA
--GENCODE basic
PVT1-284ENST00000659326.11706No protein-
 
lncRNA
--GENCODE basic
PVT1-346ENST00000667305.11701No protein-
 
lncRNA
---
PVT1-203ENST00000513868.61699No protein-
 
lncRNA
--GENCODE basicTSL:1
PVT1-263ENST00000657356.11697No protein-
 
lncRNA
--GENCODE basic
PVT1-357ENST00000668619.11685No protein-
 
lncRNA
---
PVT1-307ENST00000662410.11668No protein-
 
lncRNA
---
PVT1-349ENST00000667630.11634No protein-
 
lncRNA
---
PVT1-340ENST00000666776.11628No protein-
 
lncRNA
--GENCODE basic
PVT1-215ENST00000522963.61619No protein-
 
lncRNA
--GENCODE basicTSL:4
PVT1-229ENST00000652816.11610No protein-
 
lncRNA
---
PVT1-366ENST00000670204.11600No protein-
 
lncRNA
--GENCODE basic
PVT1-250ENST00000656402.11585No protein-
 
lncRNA
---
PVT1-261ENST00000657289.11581No protein-
 
lncRNA
---
PVT1-305ENST00000661988.11580No protein-
 
lncRNA
---
PVT1-210ENST00000521122.21578No protein-
 
lncRNA
--GENCODE basicTSL:3
PVT1-341ENST00000666777.11555No protein-
 
lncRNA
---
PVT1-300ENST00000661160.11546No protein-
 
lncRNA
---
PVT1-212ENST00000521951.11535No protein-
 
lncRNA
--TSL:1
PVT1-286ENST00000659666.11533No protein-
 
lncRNA
--GENCODE basic
PVT1-303ENST00000661625.11519No protein-
 
lncRNA
--GENCODE basic
PVT1-362ENST00000669416.11516No protein-
 
lncRNA
---
PVT1-205ENST00000517790.21513No protein-
 
lncRNA
--TSL:2
PVT1-258ENST00000657112.11499No protein-
 
lncRNA
---
PVT1-304ENST00000661830.11490No protein-
 
lncRNA
---
PVT1-237ENST00000653853.11490No protein-
 
lncRNA
---
PVT1-364ENST00000669951.11485No protein-
 
lncRNA
---
PVT1-242ENST00000654369.11482No protein-
 
lncRNA
---
PVT1-334ENST00000666080.11481No protein-
 
lncRNA
---
PVT1-312ENST00000663461.11471No protein-
 
lncRNA
---
PVT1-344ENST00000667149.11463No protein-
 
lncRNA
---
PVT1-240ENST00000654105.11460No protein-
 
lncRNA
---
PVT1-268ENST00000657596.11455No protein-
 
lncRNA
---
PVT1-266ENST00000657451.11454No protein-
 
lncRNA
---
PVT1-301ENST00000661205.11449No protein-
 
lncRNA
---
PVT1-352ENST00000668123.11433No protein-
 
lncRNA
---
PVT1-360ENST00000669272.11417No protein-
 
lncRNA
---
PVT1-241ENST00000654324.11411No protein-
 
lncRNA
---
PVT1-330ENST00000665737.11410No protein-
 
lncRNA
---
PVT1-279ENST00000658350.11402No protein-
 
lncRNA
---
PVT1-319ENST00000664299.11396No protein-
 
lncRNA
---
PVT1-375ENST00000671092.11393No protein-
 
lncRNA
---
PVT1-269ENST00000657667.11378No protein-
 
lncRNA
---
PVT1-285ENST00000659625.11363No protein-
 
lncRNA
---
PVT1-260ENST00000657211.11353No protein-
 
lncRNA
---
PVT1-373ENST00000670795.11348No protein-
 
lncRNA
---
PVT1-311ENST00000663059.11330No protein-
 
lncRNA
---
PVT1-238ENST00000653990.11329No protein-
 
lncRNA
---
PVT1-367ENST00000670223.11321No protein-
 
lncRNA
---
PVT1-257ENST00000656999.11314No protein-
 
lncRNA
---
PVT1-338ENST00000666353.11312No protein-
 
lncRNA
---
PVT1-239ENST00000654091.11311No protein-
 
lncRNA
---
PVT1-251ENST00000656411.11281No protein-
 
lncRNA
---
PVT1-358ENST00000669082.11280No protein-
 
lncRNA
---
PVT1-233ENST00000653497.11278No protein-
 
lncRNA
---
PVT1-234ENST00000653522.11275No protein-
 
lncRNA
---
PVT1-350ENST00000667714.11269No protein-
 
lncRNA
---
PVT1-236ENST00000653845.11262No protein-
 
lncRNA
---
PVT1-267ENST00000657517.11253No protein-
 
lncRNA
---
PVT1-318ENST00000664293.11206No protein-
 
lncRNA
---
PVT1-314ENST00000663753.11206No protein-
 
lncRNA
---
PVT1-321ENST00000664742.11200No protein-
 
lncRNA
---
PVT1-290ENST00000660122.11199No protein-
 
lncRNA
---
PVT1-204ENST00000517525.21194No protein-
 
lncRNA
--TSL:3
PVT1-374ENST00000671088.11191No protein-
 
lncRNA
---
PVT1-259ENST00000657183.11172No protein-
 
lncRNA
--GENCODE basic
PVT1-252ENST00000656491.11167No protein-
 
lncRNA
---
PVT1-281ENST00000658556.11163No protein-
 
lncRNA
---
PVT1-329ENST00000665721.11162No protein-
 
lncRNA
---
PVT1-359ENST00000669132.11156No protein-
 
lncRNA
---
PVT1-310ENST00000662766.11152No protein-
 
lncRNA
---
PVT1-292ENST00000660200.11139No protein-
 
lncRNA
--GENCODE basic
PVT1-306ENST00000662061.11139No protein-
 
lncRNA
---
PVT1-213ENST00000522414.21132No protein-
 
lncRNA
--TSL:2
PVT1-298ENST00000660896.11128No protein-
 
lncRNA
---
PVT1-227ENST00000652695.11126No protein-
 
lncRNA
---
PVT1-370ENST00000670602.11124No protein-
 
lncRNA
---
PVT1-246ENST00000655783.11118No protein-
 
lncRNA
---
PVT1-220ENST00000524165.61114No protein-
 
lncRNA
--TSL:2
PVT1-320ENST00000664610.11114No protein-
 
lncRNA
---
PVT1-371ENST00000670626.11114No protein-
 
lncRNA
---
PVT1-202ENST00000512617.71109No protein-
 
lncRNA
--TSL:3
PVT1-247ENST00000656077.11109No protein-
 
lncRNA
--GENCODE basic
PVT1-326ENST00000665246.11096No protein-
 
lncRNA
---
PVT1-355ENST00000668479.11091No protein-
 
lncRNA
---
PVT1-264ENST00000657384.11068No protein-
 
lncRNA
---
PVT1-363ENST00000669509.11066No protein-
 
lncRNA
---
PVT1-333ENST00000666076.11062No protein-
 
lncRNA
---
PVT1-218ENST00000523328.61047No protein-
 
lncRNA
--TSL:1
PVT1-348ENST00000667539.11041No protein-
 
lncRNA
---
PVT1-315ENST00000664139.11036No protein-
 
lncRNA
---
PVT1-221ENST00000650846.11020No protein-
 
lncRNA
---
PVT1-342ENST00000666842.11019No protein-
 
lncRNA
---
PVT1-226ENST00000652492.11017No protein-
 
lncRNA
--GENCODE basic
PVT1-255ENST00000656880.11017No protein-
 
lncRNA
---
PVT1-201ENST00000504719.71017No protein-
 
lncRNA
--TSL:2
PVT1-208ENST00000519481.61010No protein-
 
lncRNA
--TSL:2
PVT1-339ENST00000666452.11001No protein-
 
lncRNA
---
PVT1-328ENST00000665698.11000No protein-
 
lncRNA
---
PVT1-207ENST00000518528.2995No protein-
 
lncRNA
--TSL:3
PVT1-245ENST00000655594.1978No protein-
 
lncRNA
---
PVT1-271ENST00000657693.1977No protein-
 
lncRNA
---
PVT1-223ENST00000651568.1971No protein-
 
lncRNA
--GENCODE basic
PVT1-324ENST00000665166.1965No protein-
 
lncRNA
---
PVT1-325ENST00000665175.1964No protein-
 
lncRNA
---
PVT1-217ENST00000523190.6963No protein-
 
lncRNA
--TSL:3
PVT1-337ENST00000666223.1963No protein-
 
lncRNA
---
PVT1-356ENST00000668480.1956No protein-
 
lncRNA
---
PVT1-249ENST00000656396.1938No protein-
 
lncRNA
---
PVT1-248ENST00000656168.1935No protein-
 
lncRNA
--GENCODE basic
PVT1-302ENST00000661391.1924No protein-
 
lncRNA
---
PVT1-214ENST00000522875.5922No protein-
 
lncRNA
--TSL:5
PVT1-225ENST00000651664.1914No protein-
 
lncRNA
---
PVT1-276ENST00000658158.1909No protein-
 
lncRNA
--GENCODE basic
PVT1-262ENST00000657297.1907No protein-
 
lncRNA
---
PVT1-235ENST00000653608.1906No protein-
 
lncRNA
---
PVT1-256ENST00000656948.1904No protein-
 
lncRNA
---
PVT1-345ENST00000667204.1897No protein-
 
lncRNA
---
PVT1-361ENST00000669407.1890No protein-
 
lncRNA
---
PVT1-322ENST00000664924.1886No protein-
 
lncRNA
---
PVT1-369ENST00000670535.1876No protein-
 
lncRNA
---
PVT1-289ENST00000660069.1870No protein-
 
lncRNA
---
PVT1-231ENST00000652993.1866No protein-
 
lncRNA
---
PVT1-316ENST00000664214.1861No protein-
 
lncRNA
---
PVT1-309ENST00000662709.1858No protein-
 
lncRNA
---
PVT1-243ENST00000655099.1855No protein-
 
lncRNA
---
PVT1-297ENST00000660781.1854No protein-
 
lncRNA
---
PVT1-219ENST00000523427.2837No protein-
 
lncRNA
--TSL:3
PVT1-209ENST00000520913.2835No protein-
 
lncRNA
--TSL:2
PVT1-343ENST00000666878.1830No protein-
 
lncRNA
---
PVT1-230ENST00000652883.1821No protein-
 
lncRNA
---
PVT1-206ENST00000517838.6821No protein-
 
lncRNA
--TSL:2
PVT1-274ENST00000658018.1820No protein-
 
lncRNA
---
PVT1-228ENST00000652728.1812No protein-
 
lncRNA
---
PVT1-376ENST00000671587.1803No protein-
 
lncRNA
---
PVT1-287ENST00000659892.1782No protein-
 
lncRNA
---
PVT1-222ENST00000650930.1777No protein-
 
lncRNA
---
PVT1-291ENST00000660146.1764No protein-
 
lncRNA
---
PVT1-327ENST00000665372.1762No protein-
 
lncRNA
---
PVT1-280ENST00000658429.1760No protein-
 
lncRNA
---
PVT1-354ENST00000668351.1759No protein-
 
lncRNA
---
PVT1-299ENST00000660912.1754No protein-
 
lncRNA
---
PVT1-275ENST00000658065.1745No protein-
 
lncRNA
---
PVT1-244ENST00000655148.1724No protein-
 
lncRNA
---
PVT1-273ENST00000657945.1678No protein-
 
lncRNA
---
PVT1-296ENST00000660659.1673No protein-
 
lncRNA
---
PVT1-278ENST00000658305.1641No protein-
 
lncRNA
---
PVT1-232ENST00000653406.1619No protein-
 
lncRNA
---
PVT1-313ENST00000663715.1615No protein-
 
lncRNA
---
PVT1-270ENST00000657682.1611No protein-
 
lncRNA
---
PVT1-272ENST00000657844.1609No protein-
 
lncRNA
---
PVT1-335ENST00000666105.1608No protein-
 
lncRNA
---
PVT1-353ENST00000668215.1590No protein-
 
lncRNA
---
PVT1-332ENST00000666039.1520No protein-
 
lncRNA
---
PVT1-365ENST00000670009.1456No protein-
 
lncRNA
---
PVT1-277ENST00000658242.1432No protein-
 
lncRNA
---
PVT1-211ENST00000521600.5408No protein-
 
lncRNA
--TSL:2
Description

Pvt1 oncogene [Source:HGNC Symbol;Acc:HGNC:9709]

Gene Synonyms

LINC00079, MIR1204HG, NCRNA00079, onco-lncRNA-100

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
PVT1-224ENST00000651587.12444No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
PVT1-293ENST00000660438.12450No protein-
 
lncRNA
--GENCODE basic
PVT1-216ENST00000523068.22255No protein-
 
lncRNA
--GENCODE basicTSL:5
PVT1-323ENST00000664995.12230No protein-
 
lncRNA
--GENCODE basic
PVT1-283ENST00000659106.12187No protein-
 
lncRNA
---
PVT1-295ENST00000660631.12161No protein-
 
lncRNA
---
PVT1-265ENST00000657449.12149No protein-
 
lncRNA
--GENCODE basic
PVT1-347ENST00000667418.12143No protein-
 
lncRNA
--GENCODE basic
PVT1-336ENST00000666147.12097No protein-
 
lncRNA
---
PVT1-254ENST00000656693.11990No protein-
 
lncRNA
--GENCODE basic
PVT1-351ENST00000668098.11985No protein-
 
lncRNA
---
PVT1-331ENST00000665856.11965No protein-
 
lncRNA
--GENCODE basic
PVT1-253ENST00000656532.11909No protein-
 
lncRNA
---
PVT1-368ENST00000670532.11840No protein-
 
lncRNA
--GENCODE basic
PVT1-294ENST00000660456.11814No protein-
 
lncRNA
---
PVT1-372ENST00000670714.11756No protein-
 
lncRNA
---
PVT1-288ENST00000659912.11744No protein-
 
lncRNA
---
PVT1-282ENST00000658840.11738No protein-
 
lncRNA
--GENCODE basic
PVT1-308ENST00000662413.11727No protein-
 
lncRNA
---
PVT1-317ENST00000664265.11720No protein-
 
lncRNA
--GENCODE basic
PVT1-284ENST00000659326.11706No protein-
 
lncRNA
--GENCODE basic
PVT1-346ENST00000667305.11701No protein-
 
lncRNA
---
PVT1-203ENST00000513868.61699No protein-
 
lncRNA
--GENCODE basicTSL:1
PVT1-263ENST00000657356.11697No protein-
 
lncRNA
--GENCODE basic
PVT1-357ENST00000668619.11685No protein-
 
lncRNA
---
PVT1-307ENST00000662410.11668No protein-
 
lncRNA
---
PVT1-349ENST00000667630.11634No protein-
 
lncRNA
---
PVT1-340ENST00000666776.11628No protein-
 
lncRNA
--GENCODE basic
PVT1-215ENST00000522963.61619No protein-
 
lncRNA
--GENCODE basicTSL:4
PVT1-229ENST00000652816.11610No protein-
 
lncRNA
---
PVT1-366ENST00000670204.11600No protein-
 
lncRNA
--GENCODE basic
PVT1-250ENST00000656402.11585No protein-
 
lncRNA
---
PVT1-261ENST00000657289.11581No protein-
 
lncRNA
---
PVT1-305ENST00000661988.11580No protein-
 
lncRNA
---
PVT1-210ENST00000521122.21578No protein-
 
lncRNA
--GENCODE basicTSL:3
PVT1-341ENST00000666777.11555No protein-
 
lncRNA
---
PVT1-300ENST00000661160.11546No protein-
 
lncRNA
---
PVT1-212ENST00000521951.11535No protein-
 
lncRNA
--TSL:1
PVT1-286ENST00000659666.11533No protein-
 
lncRNA
--GENCODE basic
PVT1-303ENST00000661625.11519No protein-
 
lncRNA
--GENCODE basic
PVT1-362ENST00000669416.11516No protein-
 
lncRNA
---
PVT1-205ENST00000517790.21513No protein-
 
lncRNA
--TSL:2
PVT1-258ENST00000657112.11499No protein-
 
lncRNA
---
PVT1-304ENST00000661830.11490No protein-
 
lncRNA
---
PVT1-237ENST00000653853.11490No protein-
 
lncRNA
---
PVT1-364ENST00000669951.11485No protein-
 
lncRNA
---
PVT1-242ENST00000654369.11482No protein-
 
lncRNA
---
PVT1-334ENST00000666080.11481No protein-
 
lncRNA
---
PVT1-312ENST00000663461.11471No protein-
 
lncRNA
---
PVT1-344ENST00000667149.11463No protein-
 
lncRNA
---
PVT1-240ENST00000654105.11460No protein-
 
lncRNA
---
PVT1-268ENST00000657596.11455No protein-
 
lncRNA
---
PVT1-266ENST00000657451.11454No protein-
 
lncRNA
---
PVT1-301ENST00000661205.11449No protein-
 
lncRNA
---
PVT1-352ENST00000668123.11433No protein-
 
lncRNA
---
PVT1-360ENST00000669272.11417No protein-
 
lncRNA
---
PVT1-241ENST00000654324.11411No protein-
 
lncRNA
---
PVT1-330ENST00000665737.11410No protein-
 
lncRNA
---
PVT1-279ENST00000658350.11402No protein-
 
lncRNA
---
PVT1-319ENST00000664299.11396No protein-
 
lncRNA
---
PVT1-375ENST00000671092.11393No protein-
 
lncRNA
---
PVT1-269ENST00000657667.11378No protein-
 
lncRNA
---
PVT1-285ENST00000659625.11363No protein-
 
lncRNA
---
PVT1-260ENST00000657211.11353No protein-
 
lncRNA
---
PVT1-373ENST00000670795.11348No protein-
 
lncRNA
---
PVT1-311ENST00000663059.11330No protein-
 
lncRNA
---
PVT1-238ENST00000653990.11329No protein-
 
lncRNA
---
PVT1-367ENST00000670223.11321No protein-
 
lncRNA
---
PVT1-257ENST00000656999.11314No protein-
 
lncRNA
---
PVT1-338ENST00000666353.11312No protein-
 
lncRNA
---
PVT1-239ENST00000654091.11311No protein-
 
lncRNA
---
PVT1-251ENST00000656411.11281No protein-
 
lncRNA
---
PVT1-358ENST00000669082.11280No protein-
 
lncRNA
---
PVT1-233ENST00000653497.11278No protein-
 
lncRNA
---
PVT1-234ENST00000653522.11275No protein-
 
lncRNA
---
PVT1-350ENST00000667714.11269No protein-
 
lncRNA
---
PVT1-236ENST00000653845.11262No protein-
 
lncRNA
---
PVT1-267ENST00000657517.11253No protein-
 
lncRNA
---
PVT1-318ENST00000664293.11206No protein-
 
lncRNA
---
PVT1-314ENST00000663753.11206No protein-
 
lncRNA
---
PVT1-321ENST00000664742.11200No protein-
 
lncRNA
---
PVT1-290ENST00000660122.11199No protein-
 
lncRNA
---
PVT1-204ENST00000517525.21194No protein-
 
lncRNA
--TSL:3
PVT1-374ENST00000671088.11191No protein-
 
lncRNA
---
PVT1-259ENST00000657183.11172No protein-
 
lncRNA
--GENCODE basic
PVT1-252ENST00000656491.11167No protein-
 
lncRNA
---
PVT1-281ENST00000658556.11163No protein-
 
lncRNA
---
PVT1-329ENST00000665721.11162No protein-
 
lncRNA
---
PVT1-359ENST00000669132.11156No protein-
 
lncRNA
---
PVT1-310ENST00000662766.11152No protein-
 
lncRNA
---
PVT1-292ENST00000660200.11139No protein-
 
lncRNA
--GENCODE basic
PVT1-306ENST00000662061.11139No protein-
 
lncRNA
---
PVT1-213ENST00000522414.21132No protein-
 
lncRNA
--TSL:2
PVT1-298ENST00000660896.11128No protein-
 
lncRNA
---
PVT1-227ENST00000652695.11126No protein-
 
lncRNA
---
PVT1-370ENST00000670602.11124No protein-
 
lncRNA
---
PVT1-246ENST00000655783.11118No protein-
 
lncRNA
---
PVT1-220ENST00000524165.61114No protein-
 
lncRNA
--TSL:2
PVT1-320ENST00000664610.11114No protein-
 
lncRNA
---
PVT1-371ENST00000670626.11114No protein-
 
lncRNA
---
PVT1-202ENST00000512617.71109No protein-
 
lncRNA
--TSL:3
PVT1-247ENST00000656077.11109No protein-
 
lncRNA
--GENCODE basic
PVT1-326ENST00000665246.11096No protein-
 
lncRNA
---
PVT1-355ENST00000668479.11091No protein-
 
lncRNA
---
PVT1-264ENST00000657384.11068No protein-
 
lncRNA
---
PVT1-363ENST00000669509.11066No protein-
 
lncRNA
---
PVT1-333ENST00000666076.11062No protein-
 
lncRNA
---
PVT1-218ENST00000523328.61047No protein-
 
lncRNA
--TSL:1
PVT1-348ENST00000667539.11041No protein-
 
lncRNA
---
PVT1-315ENST00000664139.11036No protein-
 
lncRNA
---
PVT1-221ENST00000650846.11020No protein-
 
lncRNA
---
PVT1-342ENST00000666842.11019No protein-
 
lncRNA
---
PVT1-226ENST00000652492.11017No protein-
 
lncRNA
--GENCODE basic
PVT1-255ENST00000656880.11017No protein-
 
lncRNA
---
PVT1-201ENST00000504719.71017No protein-
 
lncRNA
--TSL:2
PVT1-208ENST00000519481.61010No protein-
 
lncRNA
--TSL:2
PVT1-339ENST00000666452.11001No protein-
 
lncRNA
---
PVT1-328ENST00000665698.11000No protein-
 
lncRNA
---
PVT1-207ENST00000518528.2995No protein-
 
lncRNA
--TSL:3
PVT1-245ENST00000655594.1978No protein-
 
lncRNA
---
PVT1-271ENST00000657693.1977No protein-
 
lncRNA
---
PVT1-223ENST00000651568.1971No protein-
 
lncRNA
--GENCODE basic
PVT1-324ENST00000665166.1965No protein-
 
lncRNA
---
PVT1-325ENST00000665175.1964No protein-
 
lncRNA
---
PVT1-217ENST00000523190.6963No protein-
 
lncRNA
--TSL:3
PVT1-337ENST00000666223.1963No protein-
 
lncRNA
---
PVT1-356ENST00000668480.1956No protein-
 
lncRNA
---
PVT1-249ENST00000656396.1938No protein-
 
lncRNA
---
PVT1-248ENST00000656168.1935No protein-
 
lncRNA
--GENCODE basic
PVT1-302ENST00000661391.1924No protein-
 
lncRNA
---
PVT1-214ENST00000522875.5922No protein-
 
lncRNA
--TSL:5
PVT1-225ENST00000651664.1914No protein-
 
lncRNA
---
PVT1-276ENST00000658158.1909No protein-
 
lncRNA
--GENCODE basic
PVT1-262ENST00000657297.1907No protein-
 
lncRNA
---
PVT1-235ENST00000653608.1906No protein-
 
lncRNA
---
PVT1-256ENST00000656948.1904No protein-
 
lncRNA
---
PVT1-345ENST00000667204.1897No protein-
 
lncRNA
---
PVT1-361ENST00000669407.1890No protein-
 
lncRNA
---
PVT1-322ENST00000664924.1886No protein-
 
lncRNA
---
PVT1-369ENST00000670535.1876No protein-
 
lncRNA
---
PVT1-289ENST00000660069.1870No protein-
 
lncRNA
---
PVT1-231ENST00000652993.1866No protein-
 
lncRNA
---
PVT1-316ENST00000664214.1861No protein-
 
lncRNA
---
PVT1-309ENST00000662709.1858No protein-
 
lncRNA
---
PVT1-243ENST00000655099.1855No protein-
 
lncRNA
---
PVT1-297ENST00000660781.1854No protein-
 
lncRNA
---
PVT1-219ENST00000523427.2837No protein-
 
lncRNA
--TSL:3
PVT1-209ENST00000520913.2835No protein-
 
lncRNA
--TSL:2
PVT1-343ENST00000666878.1830No protein-
 
lncRNA
---
PVT1-230ENST00000652883.1821No protein-
 
lncRNA
---
PVT1-206ENST00000517838.6821No protein-
 
lncRNA
--TSL:2
PVT1-274ENST00000658018.1820No protein-
 
lncRNA
---
PVT1-228ENST00000652728.1812No protein-
 
lncRNA
---
PVT1-376ENST00000671587.1803No protein-
 
lncRNA
---
PVT1-287ENST00000659892.1782No protein-
 
lncRNA
---
PVT1-222ENST00000650930.1777No protein-
 
lncRNA
---
PVT1-291ENST00000660146.1764No protein-
 
lncRNA
---
PVT1-327ENST00000665372.1762No protein-
 
lncRNA
---
PVT1-280ENST00000658429.1760No protein-
 
lncRNA
---
PVT1-354ENST00000668351.1759No protein-
 
lncRNA
---
PVT1-299ENST00000660912.1754No protein-
 
lncRNA
---
PVT1-275ENST00000658065.1745No protein-
 
lncRNA
---
PVT1-244ENST00000655148.1724No protein-
 
lncRNA
---
PVT1-273ENST00000657945.1678No protein-
 
lncRNA
---
PVT1-296ENST00000660659.1673No protein-
 
lncRNA
---
PVT1-278ENST00000658305.1641No protein-
 
lncRNA
---
PVT1-232ENST00000653406.1619No protein-
 
lncRNA
---
PVT1-313ENST00000663715.1615No protein-
 
lncRNA
---
PVT1-270ENST00000657682.1611No protein-
 
lncRNA
---
PVT1-272ENST00000657844.1609No protein-
 
lncRNA
---
PVT1-335ENST00000666105.1608No protein-
 
lncRNA
---
PVT1-353ENST00000668215.1590No protein-
 
lncRNA
---
PVT1-332ENST00000666039.1520No protein-
 
lncRNA
---
PVT1-365ENST00000670009.1456No protein-
 
lncRNA
---
PVT1-277ENST00000658242.1432No protein-
 
lncRNA
---
PVT1-211ENST00000521600.5408No protein-
 
lncRNA
--TSL:2
Description

erythrocyte membrane protein band 4.1 [Source:HGNC Symbol;Acc:HGNC:3377]

Gene Synonyms

4.1R, EL1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
EPB41-201ENST00000343067.96031864aaENSP00000345259.4
 
Protein coding
CCDS53288P11171-1 NM_001376013.1MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:5
EPB41-205ENST00000373798.55933864aaENSP00000362904.1
 
Protein coding
CCDS53288P11171-1 -GENCODE basicAPPRIS P2TSL:5
EPB41-231ENST00000647103.15772601aaENSP00000496326.1
 
Protein coding
CCDS85947A0A2R8Y7Y3 -GENCODE basicAPPRIS ALT2
EPB41-206ENST00000373800.72853588aaENSP00000362906.3
 
Protein coding
CCDS331P11171-4 -GENCODE basicTSL:1
EPB41-202ENST00000347529.72676775aaENSP00000290100.6
 
Protein coding
CCDS330P11171-5 -GENCODE basicTSL:1
EPB41-204ENST00000373797.22407720aaENSP00000362903.1
 
Protein coding
CCDS53289P11171-7 -GENCODE basicTSL:1
EPB41-219ENST00000644342.16016542aaENSP00000495138.1
 
Protein coding
-A0A2R8Y6D0 -GENCODE basic
EPB41-214ENST00000642937.25925655aaENSP00000494212.1
 
Protein coding
-A0A2R8YD30 -GENCODE basicAPPRIS ALT2
EPB41-221ENST00000644600.15595787aaENSP00000494945.1
 
Protein coding
-A0A2R8Y5Z6 -GENCODE basic
EPB41-216ENST00000643173.15496766aaENSP00000494244.1
 
Protein coding
-A0A2R8Y570 -GENCODE basic
EPB41-218ENST00000643604.15432782aaENSP00000494435.1
 
Protein coding
-A0A2R8Y5G2 -GENCODE basic
EPB41-236ENST00000649717.14367542aaENSP00000497875.1
 
Protein coding
-A0A3B3ITP0 -GENCODE basic
EPB41-239ENST00000650265.14185807aaENSP00000498003.1
 
Protein coding
-A0A3B3IU06 -GENCODE basic
EPB41-223ENST00000644848.14182387aaENSP00000493958.1
 
Protein coding
-A0A2R8Y4N6 -CDS 5' incomplete
EPB41-222ENST00000644780.14151748aaENSP00000494042.1
 
Protein coding
-A0A2R8YCW8 -GENCODE basic
EPB41-227ENST00000646189.13977565aaENSP00000496138.1
 
Protein coding
-A0A2R8Y7N0 -GENCODE basic
EPB41-212ENST00000636666.13642483aaENSP00000490911.1
 
Protein coding
-A0A1B0GWG0 -TSL:5CDS 5' incomplete
EPB41-225ENST00000645184.12964680aaENSP00000495300.1
 
Protein coding
-A0A2R8Y6G5 -GENCODE basic
EPB41-203ENST00000349460.92937841aaENSP00000317597.8
 
Protein coding
-A0A2U3TZH6 -GENCODE basicAPPRIS ALT2TSL:1
EPB41-233ENST00000648181.12756607aaENSP00000498195.1
 
Protein coding
-A0A3B3IUD6 -GENCODE basic
EPB41-228ENST00000646260.12501675aaENSP00000496675.1
 
Protein coding
-A0A2R8YFR9 -CDS 3' incomplete
EPB41-230ENST00000646871.1931310aaENSP00000496077.1
 
Protein coding
-A0A2R8Y783 -CDS 5' and 3' incomplete
EPB41-220ENST00000644470.1911227aaENSP00000494357.1
 
Protein coding
-A0A2R8Y5C8 -CDS 5' incomplete
EPB41-229ENST00000646800.16388544aaENSP00000493575.1
 
Nonsense mediated decay
-A0A2R8Y420 --
EPB41-234ENST00000648891.13124481aaENSP00000497843.1
 
Nonsense mediated decay
-A0A3B3ITC5 --
EPB41-215ENST00000643155.13029161aaENSP00000496751.1
 
Nonsense mediated decay
-A0A2R8YFU8 --
EPB41-213ENST00000642643.12424364aaENSP00000495763.1
 
Nonsense mediated decay
-A0A2R8Y6T6 -CDS 5' incomplete
EPB41-232ENST00000647918.14401No protein-
 
Processed transcript
----
EPB41-217ENST00000643302.14112No protein-
 
Processed transcript
----
EPB41-224ENST00000645111.13916No protein-
 
Processed transcript
----
EPB41-209ENST00000482464.62154No protein-
 
Processed transcript
---TSL:2
EPB41-238ENST00000650132.1560No protein-
 
Processed transcript
----
EPB41-210ENST00000488277.1262No protein-
 
Processed transcript
---TSL:3
EPB41-207ENST00000460378.15212No protein-
 
Retained intron
---TSL:1
EPB41-235ENST00000649674.14603No protein-
 
Retained intron
----
EPB41-226ENST00000645999.12971No protein-
 
Retained intron
----
EPB41-211ENST00000490308.2922No protein-
 
Retained intron
---TSL:3
EPB41-208ENST00000462032.1752No protein-
 
Retained intron
---TSL:2
EPB41-237ENST00000649992.1542No protein-
 
Retained intron
----
Description

mucin 1, cell surface associated [Source:HGNC Symbol;Acc:HGNC:7508]

Gene Synonyms

ADMCKD, ADMCKD1, CD227, MCD, MCKD, MCKD1, PEM, PUM

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
MUC1-223ENST00000611571.441701262aaENSP00000480333.1
 
Protein coding
-A0A087WWM1 -Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:5
MUC1-225ENST00000612778.41836484aaENSP00000484824.1
 
Protein coding
CCDS72933A0A087X2A4 -GENCODE basicAPPRIS ALT2TSL:5
MUC1-228ENST00000620103.41811475aaENSP00000481231.1
 
Protein coding
CCDS55640A0A0C4DGW3 -GENCODE basicAPPRIS ALT2TSL:5
MUC1-202ENST00000338684.91107241aaENSP00000343482.6
 
Protein coding
CCDS72934A0A0A0MRB3 -GENCODE basicTSL:1
MUC1-221ENST00000610359.41101239aaENSP00000483482.1
 
Protein coding
CCDS72935A0A087X0L2 -GENCODE basicTSL:1
MUC1-207ENST00000368392.71032264aaENSP00000357377.3
 
Protein coding
CCDS30882P15941-11 -GENCODE basicTSL:1
MUC1-227ENST00000615517.4951189aaENSP00000483473.1
 
Protein coding
CCDS72936A6ZIE4 -GENCODE basicTSL:1
MUC1-208ENST00000368393.7937198aaENSP00000357378.3
 
Protein coding
CCDS55642P15941-13 -GENCODE basicAPPRIS ALT2TSL:1
MUC1-201ENST00000337604.6859273aaENSP00000338983.5
 
Protein coding
CCDS1098P15941-8 -GENCODE basicAPPRIS P4TSL:1
MUC1-206ENST00000368390.7804255aaENSP00000357375.3
 
Protein coding
CCDS30883P15941-7 -GENCODE basicTSL:1
MUC1-210ENST00000368398.7729230aaENSP00000357383.3
 
Protein coding
CCDS55641P15941-6 -GENCODE basicTSL:1
MUC1-204ENST00000343256.9648203aaENSP00000339690.5
 
Protein coding
CCDS41409P15941-10 -GENCODE basicTSL:1
MUC1-209ENST00000368396.8516159aaENSP00000357381.4
 
Protein coding
CCDS41408P15941-12 -GENCODE basicTSL:1
MUC1-213ENST00000462215.51189135aaENSP00000480335.1
 
Protein coding
-A0A087WWM2 -GENCODE basicTSL:2
MUC1-212ENST00000457295.61161268aaENSP00000388172.3
 
Protein coding
-A0A0A0MSH4 -GENCODE basicAPPRIS ALT2TSL:2
MUC1-214ENST00000462317.51112228aaENSP00000479471.1
 
Protein coding
-A0A087WVJ0 -TSL:3CDS 5' incomplete
MUC1-226ENST00000614519.41093123aaENSP00000482988.1
 
Protein coding
-A0A087WZZ6 -GENCODE basicTSL:2
MUC1-224ENST00000611577.41023213aaENSP00000483581.1
 
Protein coding
-A6ZIE3 -GENCODE basicTSL:1
MUC1-211ENST00000438413.5927229aaENSP00000389098.1
 
Protein coding
-B1AVQ7 -GENCODE basicTSL:1
MUC1-219ENST00000485118.566685aaENSP00000478068.1
 
Protein coding
-A0A087WTR1 -TSL:3CDS 5' incomplete
MUC1-218ENST00000471283.5635149aaENSP00000484730.1
 
Protein coding
-Q7Z536 -GENCODE basicTSL:1
MUC1-205ENST00000368389.6543168aaENSP00000357374.2
 
Protein coding
-P15941-9 -GENCODE basicTSL:1
MUC1-203ENST00000342482.8537166aaENSP00000342814.4
 
Protein coding
-P15941-16 -GENCODE basicTSL:1
MUC1-222ENST00000610468.41162126aaENSP00000482688.1
 
Nonsense mediated decay
-A0A087WZI8 -TSL:1
MUC1-220ENST00000498431.566796aaENSP00000483128.1
 
Nonsense mediated decay
-A0A087X061 -TSL:1
MUC1-216ENST00000467134.561980aaENSP00000484006.1
 
Nonsense mediated decay
-B6ECB5 -TSL:1
MUC1-215ENST00000466913.1177No protein-
 
Processed transcript
---TSL:1
MUC1-217ENST00000468978.2899No protein-
 
Retained intron
---TSL:2
MUC1-229ENST00000620770.1572No protein-
 
Retained intron
---TSL:1
Description

spectrin repeat containing nuclear envelope protein 1 [Source:HGNC Symbol;Acc:HGNC:17089]

Gene Synonyms

8B, ARCA1, C6orf98, CPG2, KIAA0796, MYNE1, Nesp1, Nesprin-1, SCAR8, SYNE-1B, dJ45H2.2, enaptin

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SYNE1-206ENST00000367255.10277088797aaENSP00000356224.5
 
Protein coding
CCDS5236Q8NF91-1 NM_182961.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
SYNE1-211ENST00000423061.6274758749aaENSP00000396024.1
 
Protein coding
CCDS5235A0A0C4DG40 -GENCODE basicAPPRIS ALT2TSL:1
SYNE1-202ENST00000354674.53785975aaENSP00000346701.4
 
Protein coding
CCDS87458F8WAI0 NM_001347702.2MANE Plus Clinical v0.93GENCODE basicTSL:5
SYNE1-203ENST00000367248.771651433aaENSP00000356217.3
 
Protein coding
-F5GXQ8 -GENCODE basicTSL:5
SYNE1-241ENST00000672122.166601424aaENSP00000500559.1
 
Protein coding
-A0A5F9ZHR3 -GENCODE basic
SYNE1-204ENST00000367251.758371654aaENSP00000356220.3
 
Protein coding
-H0Y325 -TSL:1CDS 5' incomplete
SYNE1-205ENST00000367253.851891725aaENSP00000356222.4
 
Protein coding
-Q8NF91-6 -GENCODE basicTSL:5
SYNE1-208ENST00000367257.850221355aaENSP00000356226.4
 
Protein coding
-H0Y326 -TSL:5CDS 5' incomplete
SYNE1-210ENST00000413186.648601443aaENSP00000414510.2
 
Protein coding
-Q8NF91-5 -GENCODE basicTSL:5
SYNE1-246ENST00000673281.147701528aaENSP00000500893.1
 
Protein coding
-A0A5F9ZI52 -CDS 3' incomplete
SYNE1-240ENST00000671915.13779542aaENSP00000500319.1
 
Protein coding
-A0A5F9ZHI3 -CDS 5' incomplete
SYNE1-236ENST00000539504.53768952aaENSP00000441052.1
 
Protein coding
-Q5JV20 -GENCODE basicTSL:5
SYNE1-235ENST00000537750.52850615aaENSP00000441264.1
 
Protein coding
-F5GYQ7 -TSL:5CDS 3' incomplete
SYNE1-232ENST00000535896.72802752aaENSP00000500235.1
 
Protein coding
-A0A5F9ZHD7 -GENCODE basicTSL:5
SYNE1-243ENST00000672169.12789635aaENSP00000500287.1
 
Protein coding
-A0A5F9ZHE1 -CDS 5' incomplete
SYNE1-239ENST00000610489.22688494aaENSP00000481873.2
 
Protein coding
-A0A087WYJ5 I6XKI8 -GENCODE basicTSL:5
SYNE1-245ENST00000673173.12663591aaENSP00000500180.1
 
Protein coding
-A0A5F9ZHB2 -CDS 5' incomplete
SYNE1-216ENST00000466159.62610754aaENSP00000446021.1
 
Protein coding
-F5H4Q0 -GENCODE basicTSL:1
SYNE1-242ENST00000672154.12350510aaENSP00000500128.1
 
Protein coding
-A0A5F9ZH86 -CDS 5' incomplete
SYNE1-229ENST00000495090.61907612aaENSP00000438508.1
 
Protein coding
-F5H422 -GENCODE basicTSL:1
SYNE1-213ENST00000454018.71549511aaENSP00000390858.4
 
Protein coding
-A0A0C4DH48 -TSL:1CDS 5' incomplete
SYNE1-237ENST00000540663.5776242aaENSP00000437411.1
 
Protein coding
-F5H6R8 -TSL:4CDS 3' incomplete
SYNE1-234ENST00000537033.1647195aaENSP00000443879.1
 
Protein coding
-F5GZ83 -TSL:4CDS 3' incomplete
SYNE1-218ENST00000469439.1630207aaENSP00000442805.1
 
Protein coding
-H0YGD3 -TSL:3CDS 5' incomplete
SYNE1-244ENST00000673163.1552836aaENSP00000499934.1
 
Nonsense mediated decay
-A0A5F9ZH00 --
SYNE1-247ENST00000673451.12851542aaENSP00000500189.1
 
Nonsense mediated decay
-A0A5F9ZH87 -CDS 5' incomplete
SYNE1-221ENST00000474655.6179862aaENSP00000440193.1
 
Nonsense mediated decay
-H0YFT4 -TSL:1CDS 5' incomplete
SYNE1-201ENST00000347037.93798No protein-
 
Processed transcript
---TSL:1
SYNE1-214ENST00000460912.63664No protein-
 
Processed transcript
---TSL:1
SYNE1-233ENST00000536990.53003No protein-
 
Processed transcript
---TSL:2
SYNE1-224ENST00000481502.5585No protein-
 
Processed transcript
---TSL:3
SYNE1-222ENST00000476519.1582No protein-
 
Processed transcript
---TSL:4
SYNE1-230ENST00000498751.1578No protein-
 
Processed transcript
---TSL:4
SYNE1-207ENST00000367256.910742No protein-
 
Retained intron
---TSL:1
SYNE1-209ENST00000409694.610634No protein-
 
Retained intron
---TSL:1
SYNE1-215ENST00000461872.610075No protein-
 
Retained intron
---TSL:1
SYNE1-223ENST00000478916.57780No protein-
 
Retained intron
---TSL:2
SYNE1-219ENST00000471834.17229No protein-
 
Retained intron
---TSL:1
SYNE1-227ENST00000490135.65707No protein-
 
Retained intron
---TSL:1
SYNE1-226ENST00000489156.11891No protein-
 
Retained intron
---TSL:1
SYNE1-251ENST00000684643.11629No protein-
 
Retained intron
----
SYNE1-250ENST00000684208.11540No protein-
 
Retained intron
----
SYNE1-249ENST00000682252.11540No protein-
 
Retained intron
----
SYNE1-212ENST00000448038.31275No protein-
 
Retained intron
---TSL:5
SYNE1-248ENST00000682179.1868No protein-
 
Retained intron
----
SYNE1-217ENST00000468937.2688No protein-
 
Retained intron
---TSL:2
SYNE1-228ENST00000490866.2581No protein-
 
Retained intron
---TSL:2
SYNE1-231ENST00000535081.1561No protein-
 
Retained intron
---TSL:2
SYNE1-238ENST00000545694.1526No protein-
 
Retained intron
---TSL:3
SYNE1-220ENST00000472563.2525No protein-
 
Retained intron
---TSL:2
SYNE1-225ENST00000488376.2414No protein-
 
Retained intron
---TSL:2
Description

paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]

Gene Synonyms

AN, AN1, AN2, D11S812E, WAGR

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
PAX6-269ENST00000640368.22743436aaENSP00000492024.1
 
Protein coding
CCDS31452P26367-2 NM_001368894.2MANE Select v0.93Ensembl CanonicalGENCODE basicTSL:5
PAX6-282ENST00000643871.16944422aaENSP00000495109.1
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1
PAX6-244ENST00000638914.36922436aaENSP00000492315.2
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
PAX6-231ENST00000606377.76888436aaENSP00000480026.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:5
PAX6-209ENST00000419022.66888436aaENSP00000404100.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
PAX6-254ENST00000639386.26509286aaENSP00000492658.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
PAX6-203ENST00000379109.73182422aaENSP00000368403.2
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:2
PAX6-235ENST00000638629.12844286aaENSP00000490971.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:2
PAX6-272ENST00000640610.12730422aaENSP00000491295.1
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:1
PAX6-258ENST00000639916.12622422aaENSP00000490963.1
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:1
PAX6-207ENST00000379129.72614436aaENSP00000368424.2
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:5
PAX6-202ENST00000379107.72579436aaENSP00000368401.2
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:5
PAX6-208ENST00000379132.82576422aaENSP00000368427.2
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:5
PAX6-281ENST00000640975.12553436aaENSP00000491872.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
PAX6-256ENST00000639409.12450436aaENSP00000492476.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
PAX6-248ENST00000639034.21794401aaENSP00000491679.1
 
Protein coding
CCDS86190D1KF47 -GENCODE basicTSL:5
PAX6-201ENST00000241001.131736422aaENSP00000241001.8
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:1
PAX6-217ENST00000481563.61587286aaENSP00000492205.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
PAX6-257ENST00000639548.11417286aaENSP00000491944.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
PAX6-263ENST00000640125.11375286aaENSP00000492166.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
PAX6-252ENST00000639109.12734277aaENSP00000491904.1
 
Protein coding
-A0A1W2PQ31 -TSL:5CDS 3' incomplete
PAX6-251ENST00000639079.12608263aaENSP00000492129.1
 
Protein coding
-A0A1W2PQJ8 -TSL:5CDS 3' incomplete
PAX6-260ENST00000639943.12584314aaENSP00000491229.1
 
Protein coding
-A0A1W2PPM5 -TSL:5CDS 3' incomplete
PAX6-239ENST00000638762.12580238aaENSP00000491517.1
 
Protein coding
-A0A1W2PPG3 -TSL:5CDS 3' incomplete
PAX6-236ENST00000638685.12372302aaENSP00000492316.1
 
Protein coding
-A0A1W2PRH6 -GENCODE basicTSL:5
PAX6-279ENST00000640872.12367281aaENSP00000491065.1
 
Protein coding
-A0A1W2PNS7 -TSL:1CDS 3' incomplete
PAX6-219ENST00000524853.62221417aaENSP00000431585.2
 
Protein coding
-E9PKM0 -TSL:5CDS 3' incomplete
PAX6-261ENST00000639950.12133419aaENSP00000491862.1
 
Protein coding
-A0A1W2PQA8 -TSL:5CDS 3' incomplete
PAX6-270ENST00000640431.12037370aaENSP00000491779.1
 
Protein coding
-A0A1W2PQL7 -TSL:5CDS 3' incomplete
PAX6-206ENST00000379123.101923282aaENSP00000368418.6
 
Protein coding
-A0A1W2PPJ2 -TSL:5CDS 3' incomplete
PAX6-234ENST00000638346.11863260aaENSP00000491267.1
 
Protein coding
-A0A1W2PP27 -TSL:5CDS 3' incomplete
PAX6-277ENST00000640766.11797283aaENSP00000491214.1
 
Protein coding
-A0A1W2PPH0 -TSL:5CDS 3' incomplete
PAX6-271ENST00000640460.11736413aaENSP00000492802.1
 
Protein coding
-A0A1W2PSA8 -TSL:5CDS 3' incomplete
PAX6-204ENST00000379111.71718419aaENSP00000368406.3
 
Protein coding
-A0A1W2PQA8 -TSL:5CDS 3' incomplete
PAX6-245ENST00000638963.11580473aaENSP00000491948.1
 
Protein coding
-A0A1W2PQG7 -GENCODE basicTSL:5
PAX6-275ENST00000640684.11557415aaENSP00000491492.1
 
Protein coding
-A0A1W2PPN2 -GENCODE basicTSL:5
PAX6-205ENST00000379115.91531335aaENSP00000368410.5
 
Protein coding
-A0A1X7SBT0 -TSL:5CDS 3' incomplete
PAX6-273ENST00000640613.11525368aaENSP00000492587.1
 
Protein coding
-A0A1W2PRG3 -TSL:5CDS 3' incomplete
PAX6-210ENST00000423822.71521367aaENSP00000388132.3
 
Protein coding
-B1B1I9 -TSL:5CDS 3' incomplete
PAX6-247ENST00000639006.11507249aaENSP00000491210.1
 
Protein coding
-A0A1W2PP89 -TSL:5CDS 3' incomplete
PAX6-240ENST00000638802.11505263aaENSP00000492437.1
 
Protein coding
-A0A1W2PRU4 -TSL:5CDS 3' incomplete
PAX6-267ENST00000640287.11485422aaENSP00000492822.1
 
Protein coding
-P26367-1 -TSL:1CDS 3' incomplete
PAX6-232ENST00000638250.11483282aaENSP00000491365.1
 
Protein coding
-A0A1W2PPJ2 -TSL:5CDS 3' incomplete
PAX6-250ENST00000639061.11473283aaENSP00000491324.1
 
Protein coding
-A0A1W2PPH0 -TSL:5CDS 3' incomplete
PAX6-211ENST00000438681.61395320aaENSP00000404356.2
 
Protein coding
-B1B1I8 -TSL:5CDS 3' incomplete
PAX6-242ENST00000638878.11369231aaENSP00000492081.1
 
Protein coding
-A0A1W2PQG3 -TSL:5CDS 3' incomplete
PAX6-265ENST00000640242.11298341aaENSP00000492409.1
 
Protein coding
-A0A1W2PRS6 -TSL:5CDS 3' incomplete
PAX6-280ENST00000640963.11267382aaENSP00000492397.1
 
Protein coding
-A0A1W2PRA4 -TSL:5CDS 3' incomplete
PAX6-241ENST00000638853.11248277aaENSP00000491280.1
 
Protein coding
-A0A1W2PQ31 -TSL:5CDS 3' incomplete
PAX6-237ENST00000638696.11203400aaENSP00000492756.1
 
Protein coding
-A0A1W2PS91 -GENCODE basicTSL:5
PAX6-212ENST00000455099.61202241aaENSP00000397384.2
 
Protein coding
-B1B1J0 -TSL:5CDS 3' incomplete
PAX6-238ENST00000638755.11161386aaENSP00000492181.1
 
Protein coding
-A0A1W2PQM7 -GENCODE basicTSL:5
PAX6-246ENST00000638965.1979221aaENSP00000492769.1
 
Protein coding
-A0A1W2PSB5 -GENCODE basicTSL:5
PAX6-268ENST00000640335.1964205aaENSP00000492808.1
 
Protein coding
-A0A1W2PRW7 -TSL:5CDS 3' incomplete
PAX6-220ENST00000525535.28753aaENSP00000436365.2
 
Protein coding
---TSL:5CDS 3' incomplete
PAX6-259ENST00000639920.167672aaENSP00000492111.1
 
Protein coding
-A0A1W2PR58 -TSL:5CDS 3' incomplete
PAX6-255ENST00000639394.11988163aaENSP00000492177.1
 
Nonsense mediated decay
-A0A1W2PQW3 -TSL:5
PAX6-227ENST00000533156.2848No protein-
 
Processed transcript
---TSL:5
PAX6-213ENST00000464174.6846No protein-
 
Processed transcript
---TSL:5
PAX6-222ENST00000530373.6785No protein-
 
Processed transcript
---TSL:5
PAX6-223ENST00000530714.6650No protein-
 
Processed transcript
---TSL:5
PAX6-266ENST00000640251.1649No protein-
 
Processed transcript
---TSL:5
PAX6-229ENST00000534353.5540No protein-
 
Processed transcript
---TSL:4
PAX6-253ENST00000639203.1532No protein-
 
Processed transcript
---TSL:5
PAX6-233ENST00000638278.1417No protein-
 
Processed transcript
---TSL:NA
PAX6-274ENST00000640617.1412No protein-
 
Processed transcript
---TSL:4
PAX6-278ENST00000640819.1368No protein-
 
Processed transcript
---TSL:5
PAX6-228ENST00000533333.56173No protein-
 
Retained intron
---TSL:2
PAX6-216ENST00000474783.24392No protein-
 
Retained intron
---TSL:5
PAX6-214ENST00000470027.73587No protein-
 
Retained intron
---TSL:2
PAX6-264ENST00000640172.12525No protein-
 
Retained intron
---TSL:5
PAX6-215ENST00000471303.62423No protein-
 
Retained intron
---TSL:5
PAX6-243ENST00000638913.12390No protein-
 
Retained intron
---TSL:5
PAX6-249ENST00000639054.12254No protein-
 
Retained intron
---TSL:5
PAX6-276ENST00000640735.12060No protein-
 
Retained intron
---TSL:5
PAX6-224ENST00000531910.61958No protein-
 
Retained intron
---TSL:5
PAX6-218ENST00000494377.71911No protein-
 
Retained intron
---TSL:5
PAX6-230ENST00000534390.21084No protein-
 
Retained intron
---TSL:5
PAX6-262ENST00000640038.1781No protein-
 
Retained intron
---TSL:2
PAX6-226ENST00000532916.5627No protein-
 
Retained intron
---TSL:3
PAX6-225ENST00000532175.5524No protein-
 
Retained intron
---TSL:3
PAX6-221ENST00000527769.5487No protein-
 
Retained intron
---TSL:3
Description

splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]

Gene Synonyms

PRP9, PRPF9, SAP61, SF3a60

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SF3A3-201ENST00000373019.52774501aaENSP00000362110.4
 
Protein coding
CCDS428Q12874 NM_006802.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
SF3A3-208ENST00000489537.5891No protein-
 
Processed transcript
---TSL:4
SF3A3-202ENST00000460925.1793No protein-
 
Processed transcript
---TSL:2
SF3A3-203ENST00000461869.5776No protein-
 
Processed transcript
---TSL:3
SF3A3-206ENST00000487062.1775No protein-
 
Processed transcript
---TSL:2
SF3A3-205ENST00000470585.5704No protein-
 
Processed transcript
---TSL:3
SF3A3-204ENST00000462258.1527No protein-
 
Processed transcript
---TSL:2
SF3A3-207ENST00000488934.1273No protein-
 
Processed transcript
---TSL:5
Description

Pvt1 oncogene [Source:HGNC Symbol;Acc:HGNC:9709]

Gene Synonyms

LINC00079, MIR1204HG, NCRNA00079, onco-lncRNA-100

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
PVT1-224ENST00000651587.12444No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
PVT1-293ENST00000660438.12450No protein-
 
lncRNA
--GENCODE basic
PVT1-216ENST00000523068.22255No protein-
 
lncRNA
--GENCODE basicTSL:5
PVT1-323ENST00000664995.12230No protein-
 
lncRNA
--GENCODE basic
PVT1-283ENST00000659106.12187No protein-
 
lncRNA
---
PVT1-295ENST00000660631.12161No protein-
 
lncRNA
---
PVT1-265ENST00000657449.12149No protein-
 
lncRNA
--GENCODE basic
PVT1-347ENST00000667418.12143No protein-
 
lncRNA
--GENCODE basic
PVT1-336ENST00000666147.12097No protein-
 
lncRNA
---
PVT1-254ENST00000656693.11990No protein-
 
lncRNA
--GENCODE basic
PVT1-351ENST00000668098.11985No protein-
 
lncRNA
---
PVT1-331ENST00000665856.11965No protein-
 
lncRNA
--GENCODE basic
PVT1-253ENST00000656532.11909No protein-
 
lncRNA
---
PVT1-368ENST00000670532.11840No protein-
 
lncRNA
--GENCODE basic
PVT1-294ENST00000660456.11814No protein-
 
lncRNA
---
PVT1-372ENST00000670714.11756No protein-
 
lncRNA
---
PVT1-288ENST00000659912.11744No protein-
 
lncRNA
---
PVT1-282ENST00000658840.11738No protein-
 
lncRNA
--GENCODE basic
PVT1-308ENST00000662413.11727No protein-
 
lncRNA
---
PVT1-317ENST00000664265.11720No protein-
 
lncRNA
--GENCODE basic
PVT1-284ENST00000659326.11706No protein-
 
lncRNA
--GENCODE basic
PVT1-346ENST00000667305.11701No protein-
 
lncRNA
---
PVT1-203ENST00000513868.61699No protein-
 
lncRNA
--GENCODE basicTSL:1
PVT1-263ENST00000657356.11697No protein-
 
lncRNA
--GENCODE basic
PVT1-357ENST00000668619.11685No protein-
 
lncRNA
---
PVT1-307ENST00000662410.11668No protein-
 
lncRNA
---
PVT1-349ENST00000667630.11634No protein-
 
lncRNA
---
PVT1-340ENST00000666776.11628No protein-
 
lncRNA
--GENCODE basic
PVT1-215ENST00000522963.61619No protein-
 
lncRNA
--GENCODE basicTSL:4
PVT1-229ENST00000652816.11610No protein-
 
lncRNA
---
PVT1-366ENST00000670204.11600No protein-
 
lncRNA
--GENCODE basic
PVT1-250ENST00000656402.11585No protein-
 
lncRNA
---
PVT1-261ENST00000657289.11581No protein-
 
lncRNA
---
PVT1-305ENST00000661988.11580No protein-
 
lncRNA
---
PVT1-210ENST00000521122.21578No protein-
 
lncRNA
--GENCODE basicTSL:3
PVT1-341ENST00000666777.11555No protein-
 
lncRNA
---
PVT1-300ENST00000661160.11546No protein-
 
lncRNA
---
PVT1-212ENST00000521951.11535No protein-
 
lncRNA
--TSL:1
PVT1-286ENST00000659666.11533No protein-
 
lncRNA
--GENCODE basic
PVT1-303ENST00000661625.11519No protein-
 
lncRNA
--GENCODE basic
PVT1-362ENST00000669416.11516No protein-
 
lncRNA
---
PVT1-205ENST00000517790.21513No protein-
 
lncRNA
--TSL:2
PVT1-258ENST00000657112.11499No protein-
 
lncRNA
---
PVT1-304ENST00000661830.11490No protein-
 
lncRNA
---
PVT1-237ENST00000653853.11490No protein-
 
lncRNA
---
PVT1-364ENST00000669951.11485No protein-
 
lncRNA
---
PVT1-242ENST00000654369.11482No protein-
 
lncRNA
---
PVT1-334ENST00000666080.11481No protein-
 
lncRNA
---
PVT1-312ENST00000663461.11471No protein-
 
lncRNA
---
PVT1-344ENST00000667149.11463No protein-
 
lncRNA
---
PVT1-240ENST00000654105.11460No protein-
 
lncRNA
---
PVT1-268ENST00000657596.11455No protein-
 
lncRNA
---
PVT1-266ENST00000657451.11454No protein-
 
lncRNA
---
PVT1-301ENST00000661205.11449No protein-
 
lncRNA
---
PVT1-352ENST00000668123.11433No protein-
 
lncRNA
---
PVT1-360ENST00000669272.11417No protein-
 
lncRNA
---
PVT1-241ENST00000654324.11411No protein-
 
lncRNA
---
PVT1-330ENST00000665737.11410No protein-
 
lncRNA
---
PVT1-279ENST00000658350.11402No protein-
 
lncRNA
---
PVT1-319ENST00000664299.11396No protein-
 
lncRNA
---
PVT1-375ENST00000671092.11393No protein-
 
lncRNA
---
PVT1-269ENST00000657667.11378No protein-
 
lncRNA
---
PVT1-285ENST00000659625.11363No protein-
 
lncRNA
---
PVT1-260ENST00000657211.11353No protein-
 
lncRNA
---
PVT1-373ENST00000670795.11348No protein-
 
lncRNA
---
PVT1-311ENST00000663059.11330No protein-
 
lncRNA
---
PVT1-238ENST00000653990.11329No protein-
 
lncRNA
---
PVT1-367ENST00000670223.11321No protein-
 
lncRNA
---
PVT1-257ENST00000656999.11314No protein-
 
lncRNA
---
PVT1-338ENST00000666353.11312No protein-
 
lncRNA
---
PVT1-239ENST00000654091.11311No protein-
 
lncRNA
---
PVT1-251ENST00000656411.11281No protein-
 
lncRNA
---
PVT1-358ENST00000669082.11280No protein-
 
lncRNA
---
PVT1-233ENST00000653497.11278No protein-
 
lncRNA
---
PVT1-234ENST00000653522.11275No protein-
 
lncRNA
---
PVT1-350ENST00000667714.11269No protein-
 
lncRNA
---
PVT1-236ENST00000653845.11262No protein-
 
lncRNA
---
PVT1-267ENST00000657517.11253No protein-
 
lncRNA
---
PVT1-318ENST00000664293.11206No protein-
 
lncRNA
---
PVT1-314ENST00000663753.11206No protein-
 
lncRNA
---
PVT1-321ENST00000664742.11200No protein-
 
lncRNA
---
PVT1-290ENST00000660122.11199No protein-
 
lncRNA
---
PVT1-204ENST00000517525.21194No protein-
 
lncRNA
--TSL:3
PVT1-374ENST00000671088.11191No protein-
 
lncRNA
---
PVT1-259ENST00000657183.11172No protein-
 
lncRNA
--GENCODE basic
PVT1-252ENST00000656491.11167No protein-
 
lncRNA
---
PVT1-281ENST00000658556.11163No protein-
 
lncRNA
---
PVT1-329ENST00000665721.11162No protein-
 
lncRNA
---
PVT1-359ENST00000669132.11156No protein-
 
lncRNA
---
PVT1-310ENST00000662766.11152No protein-
 
lncRNA
---
PVT1-292ENST00000660200.11139No protein-
 
lncRNA
--GENCODE basic
PVT1-306ENST00000662061.11139No protein-
 
lncRNA
---
PVT1-213ENST00000522414.21132No protein-
 
lncRNA
--TSL:2
PVT1-298ENST00000660896.11128No protein-
 
lncRNA
---
PVT1-227ENST00000652695.11126No protein-
 
lncRNA
---
PVT1-370ENST00000670602.11124No protein-
 
lncRNA
---
PVT1-246ENST00000655783.11118No protein-
 
lncRNA
---
PVT1-220ENST00000524165.61114No protein-
 
lncRNA
--TSL:2
PVT1-320ENST00000664610.11114No protein-
 
lncRNA
---
PVT1-371ENST00000670626.11114No protein-
 
lncRNA
---
PVT1-202ENST00000512617.71109No protein-
 
lncRNA
--TSL:3
PVT1-247ENST00000656077.11109No protein-
 
lncRNA
--GENCODE basic
PVT1-326ENST00000665246.11096No protein-
 
lncRNA
---
PVT1-355ENST00000668479.11091No protein-
 
lncRNA
---
PVT1-264ENST00000657384.11068No protein-
 
lncRNA
---
PVT1-363ENST00000669509.11066No protein-
 
lncRNA
---
PVT1-333ENST00000666076.11062No protein-
 
lncRNA
---
PVT1-218ENST00000523328.61047No protein-
 
lncRNA
--TSL:1
PVT1-348ENST00000667539.11041No protein-
 
lncRNA
---
PVT1-315ENST00000664139.11036No protein-
 
lncRNA
---
PVT1-221ENST00000650846.11020No protein-
 
lncRNA
---
PVT1-342ENST00000666842.11019No protein-
 
lncRNA
---
PVT1-226ENST00000652492.11017No protein-
 
lncRNA
--GENCODE basic
PVT1-255ENST00000656880.11017No protein-
 
lncRNA
---
PVT1-201ENST00000504719.71017No protein-
 
lncRNA
--TSL:2
PVT1-208ENST00000519481.61010No protein-
 
lncRNA
--TSL:2
PVT1-339ENST00000666452.11001No protein-
 
lncRNA
---
PVT1-328ENST00000665698.11000No protein-
 
lncRNA
---
PVT1-207ENST00000518528.2995No protein-
 
lncRNA
--TSL:3
PVT1-245ENST00000655594.1978No protein-
 
lncRNA
---
PVT1-271ENST00000657693.1977No protein-
 
lncRNA
---
PVT1-223ENST00000651568.1971No protein-
 
lncRNA
--GENCODE basic
PVT1-324ENST00000665166.1965No protein-
 
lncRNA
---
PVT1-325ENST00000665175.1964No protein-
 
lncRNA
---
PVT1-217ENST00000523190.6963No protein-
 
lncRNA
--TSL:3
PVT1-337ENST00000666223.1963No protein-
 
lncRNA
---
PVT1-356ENST00000668480.1956No protein-
 
lncRNA
---
PVT1-249ENST00000656396.1938No protein-
 
lncRNA
---
PVT1-248ENST00000656168.1935No protein-
 
lncRNA
--GENCODE basic
PVT1-302ENST00000661391.1924No protein-
 
lncRNA
---
PVT1-214ENST00000522875.5922No protein-
 
lncRNA
--TSL:5
PVT1-225ENST00000651664.1914No protein-
 
lncRNA
---
PVT1-276ENST00000658158.1909No protein-
 
lncRNA
--GENCODE basic
PVT1-262ENST00000657297.1907No protein-
 
lncRNA
---
PVT1-235ENST00000653608.1906No protein-
 
lncRNA
---
PVT1-256ENST00000656948.1904No protein-
 
lncRNA
---
PVT1-345ENST00000667204.1897No protein-
 
lncRNA
---
PVT1-361ENST00000669407.1890No protein-
 
lncRNA
---
PVT1-322ENST00000664924.1886No protein-
 
lncRNA
---
PVT1-369ENST00000670535.1876No protein-
 
lncRNA
---
PVT1-289ENST00000660069.1870No protein-
 
lncRNA
---
PVT1-231ENST00000652993.1866No protein-
 
lncRNA
---
PVT1-316ENST00000664214.1861No protein-
 
lncRNA
---
PVT1-309ENST00000662709.1858No protein-
 
lncRNA
---
PVT1-243ENST00000655099.1855No protein-
 
lncRNA
---
PVT1-297ENST00000660781.1854No protein-
 
lncRNA
---
PVT1-219ENST00000523427.2837No protein-
 
lncRNA
--TSL:3
PVT1-209ENST00000520913.2835No protein-
 
lncRNA
--TSL:2
PVT1-343ENST00000666878.1830No protein-
 
lncRNA
---
PVT1-230ENST00000652883.1821No protein-
 
lncRNA
---
PVT1-206ENST00000517838.6821No protein-
 
lncRNA
--TSL:2
PVT1-274ENST00000658018.1820No protein-
 
lncRNA
---
PVT1-228ENST00000652728.1812No protein-
 
lncRNA
---
PVT1-376ENST00000671587.1803No protein-
 
lncRNA
---
PVT1-287ENST00000659892.1782No protein-
 
lncRNA
---
PVT1-222ENST00000650930.1777No protein-
 
lncRNA
---
PVT1-291ENST00000660146.1764No protein-
 
lncRNA
---
PVT1-327ENST00000665372.1762No protein-
 
lncRNA
---
PVT1-280ENST00000658429.1760No protein-
 
lncRNA
---
PVT1-354ENST00000668351.1759No protein-
 
lncRNA
---
PVT1-299ENST00000660912.1754No protein-
 
lncRNA
---
PVT1-275ENST00000658065.1745No protein-
 
lncRNA
---
PVT1-244ENST00000655148.1724No protein-
 
lncRNA
---
PVT1-273ENST00000657945.1678No protein-
 
lncRNA
---
PVT1-296ENST00000660659.1673No protein-
 
lncRNA
---
PVT1-278ENST00000658305.1641No protein-
 
lncRNA
---
PVT1-232ENST00000653406.1619No protein-
 
lncRNA
---
PVT1-313ENST00000663715.1615No protein-
 
lncRNA
---
PVT1-270ENST00000657682.1611No protein-
 
lncRNA
---
PVT1-272ENST00000657844.1609No protein-
 
lncRNA
---
PVT1-335ENST00000666105.1608No protein-
 
lncRNA
---
PVT1-353ENST00000668215.1590No protein-
 
lncRNA
---
PVT1-332ENST00000666039.1520No protein-
 
lncRNA
---
PVT1-365ENST00000670009.1456No protein-
 
lncRNA
---
PVT1-277ENST00000658242.1432No protein-
 
lncRNA
---
PVT1-211ENST00000521600.5408No protein-
 
lncRNA
--TSL:2
Statistics

Exons: 4, Coding exons: 0, Transcript length: 760 bps,

Version

ENST00000658429.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x34e7c098)