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EnsemblEnsembl Home
Description

holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]

Gene Synonyms

HCS

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
HLCS-207ENST00000674895.38273873aaENSP00000502087.2
 
Protein coding
--NM_001352514.2MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT2
HLCS-202ENST00000399120.56466726aaENSP00000382071.1
 
Protein coding
CCDS13647P50747 -GENCODE basicAPPRIS P2TSL:1
HLCS-206ENST00000612277.46112726aaENSP00000479939.1
 
Protein coding
CCDS13647P50747 -GENCODE basicAPPRIS P2TSL:5
HLCS-201ENST00000336648.86010726aaENSP00000338387.3
 
Protein coding
CCDS13647P50747 -GENCODE basicAPPRIS P2TSL:1
HLCS-209ENST00000675307.14757726aaENSP00000501750.1
 
Protein coding
CCDS13647--GENCODE basicAPPRIS P2
HLCS-204ENST00000448340.578092aaENSP00000392923.1
 
Protein coding
-A0A0C4DG27 -TSL:1CDS 3' incomplete
HLCS-203ENST00000427746.166677aaENSP00000396443.1
 
Protein coding
-C9JCQ9 -TSL:3CDS 3' incomplete
HLCS-208ENST00000675057.14903604aaENSP00000501832.1
 
Nonsense mediated decay
-A0A6Q8PFK4 --
HLCS-205ENST00000482273.1729No protein-
 
Processed transcript
---TSL:2
Description

FA complementation group D2 [Source:HGNC Symbol;Acc:HGNC:3585]

Gene Synonyms

FA-D2, FACD, FAD, FANCD

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
FANCD2-212ENST00000675286.150961451aaENSP00000502379.1
 
Protein coding
CCDS33696-NM_001018115.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT2
FANCD2-201ENST00000287647.752191471aaENSP00000287647.3
 
Protein coding
CCDS2595Q9BXW9-1 -GENCODE basicAPPRIS ALT2TSL:1
FANCD2-202ENST00000419585.551851451aaENSP00000398754.1
 
Protein coding
CCDS33696Q9BXW9-2 -GENCODE basicAPPRIS P4TSL:1
FANCD2-213ENST00000676013.143341414aaENSP00000501999.1
 
Protein coding
-A0A6Q8PFY3 -CDS 3' incomplete
FANCD2-204ENST00000431693.12450241aaENSP00000399354.1
 
Protein coding
-Q9BXW9-4 -GENCODE basicTSL:1
FANCD2-211ENST00000625535.111738aaENSP00000486945.1
 
Protein coding
-F8WE37 -GENCODE basicTSL:5
FANCD2-203ENST00000421731.53425749aaENSP00000389936.1
 
Nonsense mediated decay
-H7BZJ7 -TSL:1CDS 5' incomplete
FANCD2-215ENST00000682647.1214538aaENSP00000506736.1
 
Nonsense mediated decay
----
FANCD2-205ENST00000435522.556738aaENSP00000402166.1
 
Nonsense mediated decay
-F8WE37 -TSL:4
FANCD2-214ENST00000681997.13559No protein-
 
Processed transcript
----
FANCD2-216ENST00000683263.13474No protein-
 
Processed transcript
----
FANCD2-206ENST00000438741.1558No protein-
 
Processed transcript
---TSL:2
FANCD2-209ENST00000470757.5547No protein-
 
Processed transcript
---TSL:2
FANCD2-208ENST00000470028.1449No protein-
 
Processed transcript
---TSL:5
FANCD2-217ENST00000683312.14010No protein-
 
Retained intron
----
FANCD2-218ENST00000683933.1836No protein-
 
Retained intron
----
FANCD2-210ENST00000480909.1603No protein-
 
Retained intron
---TSL:2
FANCD2-207ENST00000464934.1563No protein-
 
Retained intron
---TSL:4
Description

transmembrane protein 161A [Source:MGI Symbol;Acc:MGI:2384577]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Tmem161a-201ENSMUST00000002413.153018480aaENSMUSP00000002413.9
 
Protein coding
CCDS40369Q8VCA6-1 GENCODE basicAPPRIS P1TSL:1
Tmem161a-214ENSMUST00000182980.82080328aaENSMUSP00000138499.2
 
Protein coding
CCDS80890Q8VCA6-2 GENCODE basicTSL:1
Tmem161a-210ENSMUST00000149105.22093454aaENSMUSP00000123084.2
 
Protein coding
-F6UNW2 TSL:5CDS 5' incomplete
Tmem161a-211ENSMUST00000182365.8399126aaENSMUSP00000138641.2
 
Protein coding
-S4R2H0 TSL:5CDS 3' incomplete
Tmem161a-212ENSMUST00000182715.82516192aaENSMUSP00000138432.2
 
Nonsense mediated decay
-S4R1Z2 TSL:1
Tmem161a-209ENSMUST00000147656.82109323aaENSMUSP00000138017.2
 
Nonsense mediated decay
-M0QWV0 TSL:1
Tmem161a-204ENSMUST00000125906.865857aaENSMUSP00000137791.3
 
Nonsense mediated decay
-M0QWE7 TSL:5CDS 5' incomplete
Tmem161a-202ENSMUST00000123923.2436No protein-
 
Processed transcript
--TSL:5
Tmem161a-203ENSMUST00000125755.8371No protein-
 
Processed transcript
--TSL:3
Tmem161a-213ENSMUST00000182942.2123No protein-
 
Processed transcript
--TSL:1
Tmem161a-208ENSMUST00000143543.2827No protein-
 
Retained intron
--TSL:3
Tmem161a-206ENSMUST00000133084.8770No protein-
 
Retained intron
--TSL:3
Tmem161a-207ENSMUST00000133339.8440No protein-
 
Retained intron
--TSL:5
Tmem161a-205ENSMUST00000126268.2402No protein-
 
Retained intron
--TSL:2
Description

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 [Source:MGI Symbol;Acc:MGI:1196405]

Gene Synonyms

D2Ertd485e, SCP4

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Ctdspl2-201ENSMUST00000036647.135053465aaENSMUSP00000047543.7
 
Protein coding
CCDS16652Q8BG15-1 GENCODE basicAPPRIS P3TSL:1
Ctdspl2-204ENSMUST00000110578.83386464aaENSMUSP00000106207.2
 
Protein coding
CCDS71130Q8BG15-2 GENCODE basicAPPRIS ALT1TSL:1
Ctdspl2-203ENSMUST00000110574.81616465aaENSMUSP00000106203.2
 
Protein coding
CCDS16652Q8BG15-1 GENCODE basicAPPRIS P3TSL:5
Ctdspl2-202ENSMUST00000110572.24160394aaENSMUSP00000106201.2
 
Protein coding
-Q8BG15-6 GENCODE basicTSL:5
Ctdspl2-209ENSMUST00000140570.83543No protein-
 
Processed transcript
--TSL:1
Ctdspl2-206ENSMUST00000128883.81236No protein-
 
Processed transcript
--TSL:1
Ctdspl2-207ENSMUST00000131258.84290No protein-
 
Retained intron
--TSL:2
Ctdspl2-208ENSMUST00000138920.81762No protein-
 
Retained intron
--TSL:2
Ctdspl2-205ENSMUST00000127265.2784No protein-
 
Retained intron
--TSL:5
Description

discs large MAGUK scaffold protein 1 [Source:HGNC Symbol;Acc:HGNC:2900]

Gene Synonyms

DLGH1, SAP-97, SAP97, dJ1061C18.1.1, hdlg

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
DLG1-261ENST00000667157.14853893aaENSP00000499414.1
 
Protein coding
CCDS87192Q12959-4 NM_001366207.1MANE Select v0.93Ensembl CanonicalGENCODE basic
DLG1-201ENST00000346964.65034926aaENSP00000345731.2
 
Protein coding
CCDS3327Q12959-2 -GENCODE basicAPPRIS P4TSL:1
DLG1-202ENST00000357674.94912893aaENSP00000350303.6
 
Protein coding
CCDS87192Q12959-4 -GENCODE basicTSL:1
DLG1-268ENST00000670455.14693893aaENSP00000499542.1
 
Protein coding
CCDS87192Q12959-4 -GENCODE basic
DLG1-265ENST00000669565.14574893aaENSP00000499413.1
 
Protein coding
CCDS87192Q12959-4 -GENCODE basic
DLG1-242ENST00000659221.14524892aaENSP00000499269.1
 
Protein coding
CCDS75072A0A0C4DFT3 -GENCODE basic
DLG1-239ENST00000657381.14436892aaENSP00000499507.1
 
Protein coding
CCDS75072A0A0C4DFT3 -GENCODE basic
DLG1-208ENST00000419354.53994904aaENSP00000407531.1
 
Protein coding
CCDS43194Q12959-1 -GENCODE basicAPPRIS ALT1TSL:1
DLG1-269ENST00000670935.13926904aaENSP00000499437.1
 
Protein coding
CCDS43194Q12959-1 -GENCODE basicAPPRIS ALT1
DLG1-248ENST00000661013.13202892aaENSP00000499440.1
 
Protein coding
CCDS75072A0A0C4DFT3 -GENCODE basic
DLG1-217ENST00000452595.53053788aaENSP00000398939.1
 
Protein coding
CCDS56300Q12959-8 -GENCODE basicTSL:2
DLG1-215ENST00000448528.62977904aaENSP00000391732.2
 
Protein coding
CCDS43194Q12959-1 -GENCODE basicAPPRIS ALT1TSL:1
DLG1-237ENST00000656944.12851892aaENSP00000499584.1
 
Protein coding
CCDS75072A0A0C4DFT3 -GENCODE basic
DLG1-216ENST00000450955.52682893aaENSP00000411278.1
 
Protein coding
CCDS87192Q12959-4 -GENCODE basicTSL:5
DLG1-213ENST00000443183.52516800aaENSP00000396658.1
 
Protein coding
CCDS56301Q12959-9 -GENCODE basicTSL:2
DLG1-232ENST00000654733.15972772aaENSP00000499730.1
 
Protein coding
-A0A590UK81 --
DLG1-236ENST00000656428.14971874aaENSP00000499329.1
 
Protein coding
-A0A590UJ81 -GENCODE basic
DLG1-234ENST00000655488.14840871aaENSP00000499657.1
 
Protein coding
-Q12959-3 -GENCODE basic
DLG1-255ENST00000663148.14695871aaENSP00000499384.1
 
Protein coding
-Q12959-3 -GENCODE basic
DLG1-252ENST00000661453.14653871aaENSP00000499514.1
 
Protein coding
-Q12959-3 -GENCODE basic
DLG1-247ENST00000660898.14649925aaENSP00000499363.1
 
Protein coding
-A0A590UJD9 -GENCODE basicAPPRIS ALT1
DLG1-241ENST00000658701.14634878aaENSP00000499531.1
 
Protein coding
-A0A590UJR5 -GENCODE basic
DLG1-260ENST00000667104.14589865aaENSP00000499313.1
 
Protein coding
-A0A590UJ68 -GENCODE basic
DLG1-250ENST00000661336.14534875aaENSP00000499229.1
 
Protein coding
-A0A590UJ08 -GENCODE basic
DLG1-270ENST00000671185.14513871aaENSP00000499580.1
 
Protein coding
-Q12959-3 -GENCODE basic
DLG1-235ENST00000656087.14500883aaENSP00000499723.1
 
Protein coding
-A0A590UKA8 -GENCODE basic
DLG1-231ENST00000653795.14337833aaENSP00000499599.1
 
Protein coding
-A0A590UJX2 -GENCODE basic
DLG1-233ENST00000654737.14335839aaENSP00000499578.1
 
Protein coding
-A0A590UJS9 -GENCODE basic
DLG1-243ENST00000659716.14272871aaENSP00000499602.1
 
Protein coding
-Q12959-3 -GENCODE basic
DLG1-271ENST00000671246.14146821aaENSP00000499692.1
 
Protein coding
-A0A590UK48 -GENCODE basic
DLG1-246ENST00000660553.13962819aaENSP00000499559.1
 
Protein coding
-A0A590UJR4 -GENCODE basic
DLG1-257ENST00000664991.13795868aaENSP00000499250.1
 
Protein coding
-A0A590UJ18 -GENCODE basic
DLG1-262ENST00000667971.13774879aaENSP00000499347.1
 
Protein coding
-A0A590UJC5 -GENCODE basic
DLG1-259ENST00000666007.13389853aaENSP00000499793.1
 
Protein coding
-Q12959-5 -GENCODE basic
DLG1-254ENST00000662727.13321883aaENSP00000499774.1
 
Protein coding
-A0A590UKA8 -GENCODE basic
DLG1-240ENST00000658155.13095744aaENSP00000499257.1
 
Protein coding
-A0A590UJ29 -GENCODE basic
DLG1-210ENST00000422288.62912853aaENSP00000413238.1
 
Protein coding
-Q12959-5 -GENCODE basicTSL:5
DLG1-205ENST00000392382.62690871aaENSP00000376187.2
 
Protein coding
-Q12959-3 -GENCODE basicTSL:5
DLG1-212ENST00000436682.62407551aaENSP00000393771.2
 
Protein coding
-C9JUA9 -GENCODE basicTSL:2
DLG1-253ENST00000661808.11745375aaENSP00000499637.1
 
Protein coding
-A0A590UJZ4 -GENCODE basic
DLG1-214ENST00000447466.1858286aaENSP00000398702.1
 
Protein coding
-H7C166 -TSL:1CDS 5' and 3' incomplete
DLG1-203ENST00000392380.6716208aaENSP00000376185.2
 
Protein coding
-A8MUT6 -TSL:3CDS 3' incomplete
DLG1-206ENST00000412364.2710106aaENSP00000390403.1
 
Protein coding
-F2Z2L0 -TSL:2CDS 3' incomplete
DLG1-219ENST00000456699.6629179aaENSP00000396474.2
 
Protein coding
-C9JCP6 -TSL:3CDS 3' incomplete
DLG1-218ENST00000453607.5539122aaENSP00000412579.1
 
Protein coding
-C9IYP1 -TSL:4CDS 3' incomplete
DLG1-211ENST00000434148.130935aaENSP00000400169.1
 
Protein coding
-C9J110 -TSL:3CDS 3' incomplete
DLG1-266ENST00000669714.15455311aaENSP00000499698.1
 
Nonsense mediated decay
-A0A590UK52 --
DLG1-245ENST00000660432.14577118aaENSP00000499677.1
 
Nonsense mediated decay
-A0A590UJE6 --
DLG1-256ENST00000664564.14550300aaENSP00000499320.1
 
Nonsense mediated decay
-A0A590UJ95 --
DLG1-258ENST00000665728.14543181aaENSP00000499682.1
 
Nonsense mediated decay
-A0A590UK13 --
DLG1-267ENST00000670366.14382186aaENSP00000499310.1
 
Nonsense mediated decay
-A0A590UJ86 --
DLG1-264ENST00000669332.14357575aaENSP00000499499.1
 
Nonsense mediated decay
-A0A590UJL2 --
DLG1-229ENST00000653331.14223587aaENSP00000499752.1
 
Nonsense mediated decay
-A0A590UK70 --
DLG1-251ENST00000661440.13920118aaENSP00000499381.1
 
Nonsense mediated decay
-A0A590UJE6 --
DLG1-249ENST00000661229.13100689aaENSP00000499280.1
 
Nonsense mediated decay
-A0A590UJ64 -CDS 5' incomplete
DLG1-244ENST00000660237.13015122aaENSP00000499707.1
 
Nonsense mediated decay
-A0A590UK31 -CDS 5' incomplete
DLG1-238ENST00000657098.12998570aaENSP00000499247.1
 
Nonsense mediated decay
-A0A590UJ25 --
DLG1-204ENST00000392381.72833658aaENSP00000376186.3
 
Nonsense mediated decay
-E7EQD7 -TSL:1
DLG1-220ENST00000469073.22461628aaENSP00000499640.1
 
Nonsense mediated decay
-A0A590UK02 -TSL:4
DLG1-207ENST00000419227.51771370aaENSP00000396768.1
 
Nonsense mediated decay
-B4E2H8 -TSL:2
DLG1-209ENST00000419553.61313250aaENSP00000414189.2
 
Nonsense mediated decay
-C9JN61 -TSL:2CDS 5' incomplete
DLG1-230ENST00000653583.13968No protein-
 
Processed transcript
----
DLG1-263ENST00000668578.13429No protein-
 
Processed transcript
----
DLG1-226ENST00000485409.5656No protein-
 
Processed transcript
---TSL:3
DLG1-228ENST00000493937.1207No protein-
 
Processed transcript
---TSL:3
DLG1-221ENST00000469371.54046No protein-
 
Retained intron
---TSL:2
DLG1-223ENST00000471733.52605No protein-
 
Retained intron
---TSL:1
DLG1-224ENST00000475394.5864No protein-
 
Retained intron
---TSL:5
DLG1-225ENST00000477312.1732No protein-
 
Retained intron
---TSL:3
DLG1-227ENST00000486877.1479No protein-
 
Retained intron
---TSL:2
DLG1-222ENST00000470629.1416No protein-
 
Retained intron
---TSL:3
Description

multiple EGF-like-domains 10 [Source:NCBI gene;Acc:564571]

Gene Synonyms

fc33e05, wu:fc33e05

Location
NameTranscript IDbpProteinTranslation IDBiotypeUniProt MatchFlags
megf10-201ENSDART00000043936.735441119aaENSDARP00000043935.6
 
Protein coding
E9QJQ6 APPRIS P1
megf10-204ENSDART00000182761.134291142aaENSDARP00000151927.1
 
Protein coding
A0A2R8QIB3 -
megf10-203ENSDART00000154835.432251074aaENSDARP00000129223.3
 
Protein coding
X1WG68 -
megf10-202ENSDART00000141654.2797No protein-
 
Retained intron
--
Description

rabphilin 3A like (without C2 domains) [Source:HGNC Symbol;Acc:HGNC:10296]

Gene Synonyms

Noc2

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
RPH3AL-235ENST00000632616.12608315aaENSP00000487649.1
 
Protein coding
-Q9UNE2-1 -Ensembl CanonicalGENCODE basicTSL:2
RPH3AL-230ENST00000632000.12808286aaENSP00000487689.1
 
Protein coding
-Q9UNE2-2 -GENCODE basicTSL:1
RPH3AL-233ENST00000632545.11235286aaENSP00000487851.1
 
Protein coding
-Q9UNE2-2 -GENCODE basicTSL:2
RPH3AL-223ENST00000608278.21065315aaENSP00000483035.1
 
Protein coding
-Q9UNE2-1 -GENCODE basicTSL:1
RPH3AL-224ENST00000608519.5978286aaENSP00000476394.1
 
Protein coding
-Q9UNE2-2 -GENCODE basicTSL:2
RPH3AL-245ENST00000634169.1820201aaENSP00000488105.1
 
Protein coding
-I3L308 -TSL:3CDS 3' incomplete
RPH3AL-239ENST00000633301.1814193aaENSP00000488103.1
 
Protein coding
-I3L2N0 -TSL:3CDS 3' incomplete
RPH3AL-236ENST00000632671.1692157aaENSP00000487624.1
 
Protein coding
-I3L2G8 -TSL:5CDS 5' incomplete
RPH3AL-231ENST00000632071.159383aaENSP00000488661.1
 
Protein coding
-I3L2W0 -TSL:4CDS 3' incomplete
RPH3AL-232ENST00000632176.1586148aaENSP00000488347.1
 
Protein coding
-I3L2I9 -TSL:4CDS 3' incomplete
RPH3AL-225ENST00000609977.5579110aaENSP00000476362.3
 
Protein coding
-I3L349 -TSL:4CDS 3' incomplete
RPH3AL-237ENST00000633168.157188aaENSP00000488116.1
 
Protein coding
-I3NI49 -TSL:4CDS 3' incomplete
RPH3AL-228ENST00000631901.1566126aaENSP00000488186.1
 
Protein coding
-I3L1Q0 -TSL:4CDS 3' incomplete
RPH3AL-234ENST00000632610.1537152aaENSP00000488717.1
 
Protein coding
-I3L3M9 -TSL:5CDS 3' incomplete
RPH3AL-240ENST00000633726.1531145aaENSP00000488328.1
 
Protein coding
-I3L2X0 -TSL:4CDS 3' incomplete
RPH3AL-243ENST00000634137.148737aaENSP00000487865.1
 
Protein coding
-I3L181 -TSL:5CDS 3' incomplete
RPH3AL-226ENST00000631558.1647No protein-
 
Processed transcript
---TSL:3
RPH3AL-244ENST00000634166.1594No protein-
 
Processed transcript
---TSL:3
RPH3AL-241ENST00000633922.1569No protein-
 
Processed transcript
---TSL:4
RPH3AL-229ENST00000631957.1568No protein-
 
Processed transcript
---TSL:4
RPH3AL-242ENST00000634090.1533No protein-
 
Processed transcript
---TSL:3
RPH3AL-238ENST00000633196.1434No protein-
 
Processed transcript
---TSL:3
RPH3AL-227ENST00000631722.1877No protein-
 
Retained intron
---TSL:2
Description

lactate dehydrogenase A [Source:HGNC Symbol;Acc:HGNC:6535]

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
LDHA-242ENST00000673007.12305361aaENSP00000500603.1
 
Protein coding
-P00338-3 -Ensembl CanonicalGENCODE basic
LDHA-233ENST00000672405.12241332aaENSP00000500953.1
 
Protein coding
-P00338-1 -GENCODE basic
LDHA-246ENST00000673204.11922332aaENSP00000499977.1
 
Protein coding
-P00338-1 -GENCODE basic
LDHA-230ENST00000672078.11887241aaENSP00000500354.1
 
Protein coding
-P00338-5 -GENCODE basic
LDHA-244ENST00000673083.11766274aaENSP00000500168.1
 
Protein coding
-P00338-2 -GENCODE basic
LDHA-240ENST00000672996.11310274aaENSP00000500284.1
 
Protein coding
-P00338-4 -GENCODE basic
LDHA-229ENST00000671981.11288332aaENSP00000499898.1
 
Protein coding
-P00338-1 -GENCODE basic
LDHA-247ENST00000673339.1732144aaENSP00000499918.1
 
Protein coding
---CDS 3' incomplete
LDHA-248ENST00000673488.1682114aaENSP00000500554.1
 
Protein coding
---CDS 3' incomplete
LDHA-239ENST00000672804.1576156aaENSP00000500621.1
 
Protein coding
---CDS 3' incomplete
LDHA-245ENST00000673201.146572aaENSP00000500119.1
 
Protein coding
---CDS 3' incomplete
LDHA-237ENST00000672605.114146aaENSP00000500733.1
 
Protein coding
---GENCODE basic
LDHA-238ENST00000672754.1134045aaENSP00000500101.1
 
Nonsense mediated decay
----
LDHA-236ENST00000672544.166445aaENSP00000500704.1
 
Nonsense mediated decay
----
LDHA-234ENST00000672417.158289aaENSP00000500407.1
 
Nonsense mediated decay
----
LDHA-231ENST00000672157.157042aaENSP00000500087.1
 
Nonsense mediated decay
----
LDHA-228ENST00000671938.155694aaENSP00000500858.1
 
Nonsense mediated decay
----
LDHA-226ENST00000671771.155446aaENSP00000500077.1
 
Nonsense mediated decay
----
LDHA-249ENST00000673540.151645aaENSP00000500430.1
 
Nonsense mediated decay
----
LDHA-235ENST00000672488.12169No protein-
 
Retained intron
----
LDHA-227ENST00000671909.11511No protein-
 
Retained intron
----
LDHA-241ENST00000673005.11345No protein-
 
Retained intron
----
LDHA-250ENST00000673548.11154No protein-
 
Retained intron
----
LDHA-232ENST00000672237.1680No protein-
 
Retained intron
----
LDHA-243ENST00000673021.1656No protein-
 
Retained intron
----
Description

ankyrin repeat domain 54 [Source:HGNC Symbol;Acc:HGNC:25185]

Gene Synonyms

LIAR

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ANKRD54-201ENST00000215941.92087300aaENSP00000215941.4
 
Protein coding
CCDS13959Q6NXT1-1 NM_138797.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ANKRD54-202ENST00000406423.5954180aaENSP00000384392.1
 
Protein coding
CCDS87023B5MCX7 -GENCODE basicTSL:3
ANKRD54-204ENST00000411961.6946284aaENSP00000405782.2
 
Protein coding
-D3YTC9 -GENCODE basicTSL:5
ANKRD54-211ENST00000609454.5825107aaENSP00000477088.1
 
Protein coding
-V9GYU2 -GENCODE basicTSL:3
ANKRD54-207ENST00000434930.1735216aaENSP00000387507.1
 
Protein coding
-C9JU48 -TSL:5CDS 3' incomplete
ANKRD54-208ENST00000458278.6623208aaENSP00000412534.2
 
Protein coding
-H7C3L3 -TSL:3CDS 5' and 3' incomplete
ANKRD54-206ENST00000424350.559790aaENSP00000393035.1
 
Protein coding
-C9JX82 -TSL:3CDS 3' incomplete
ANKRD54-205ENST00000413497.5794178aaENSP00000391744.1
 
Nonsense mediated decay
-H7BZV9 -TSL:3CDS 5' incomplete
ANKRD54-203ENST00000407117.6789156aaENSP00000385180.2
 
Nonsense mediated decay
-F8WB76 -TSL:3CDS 3' incomplete
ANKRD54-210ENST00000498417.52403No protein-
 
Processed transcript
---TSL:2
ANKRD54-212ENST00000609706.11140No protein-
 
Processed transcript
---TSL:NA
ANKRD54-209ENST00000464849.5456No protein-
 
Processed transcript
---TSL:3
Description

Pvt1 oncogene [Source:HGNC Symbol;Acc:HGNC:9709]

Gene Synonyms

LINC00079, MIR1204HG, NCRNA00079, onco-lncRNA-100

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
PVT1-224ENST00000651587.12444No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
PVT1-293ENST00000660438.12450No protein-
 
lncRNA
--GENCODE basic
PVT1-216ENST00000523068.22255No protein-
 
lncRNA
--GENCODE basicTSL:5
PVT1-323ENST00000664995.12230No protein-
 
lncRNA
--GENCODE basic
PVT1-283ENST00000659106.12187No protein-
 
lncRNA
---
PVT1-295ENST00000660631.12161No protein-
 
lncRNA
---
PVT1-265ENST00000657449.12149No protein-
 
lncRNA
--GENCODE basic
PVT1-347ENST00000667418.12143No protein-
 
lncRNA
--GENCODE basic
PVT1-336ENST00000666147.12097No protein-
 
lncRNA
---
PVT1-254ENST00000656693.11990No protein-
 
lncRNA
--GENCODE basic
PVT1-351ENST00000668098.11985No protein-
 
lncRNA
---
PVT1-331ENST00000665856.11965No protein-
 
lncRNA
--GENCODE basic
PVT1-253ENST00000656532.11909No protein-
 
lncRNA
---
PVT1-368ENST00000670532.11840No protein-
 
lncRNA
--GENCODE basic
PVT1-294ENST00000660456.11814No protein-
 
lncRNA
---
PVT1-372ENST00000670714.11756No protein-
 
lncRNA
---
PVT1-288ENST00000659912.11744No protein-
 
lncRNA
---
PVT1-282ENST00000658840.11738No protein-
 
lncRNA
--GENCODE basic
PVT1-308ENST00000662413.11727No protein-
 
lncRNA
---
PVT1-317ENST00000664265.11720No protein-
 
lncRNA
--GENCODE basic
PVT1-284ENST00000659326.11706No protein-
 
lncRNA
--GENCODE basic
PVT1-346ENST00000667305.11701No protein-
 
lncRNA
---
PVT1-203ENST00000513868.61699No protein-
 
lncRNA
--GENCODE basicTSL:1
PVT1-263ENST00000657356.11697No protein-
 
lncRNA
--GENCODE basic
PVT1-357ENST00000668619.11685No protein-
 
lncRNA
---
PVT1-307ENST00000662410.11668No protein-
 
lncRNA
---
PVT1-349ENST00000667630.11634No protein-
 
lncRNA
---
PVT1-340ENST00000666776.11628No protein-
 
lncRNA
--GENCODE basic
PVT1-215ENST00000522963.61619No protein-
 
lncRNA
--GENCODE basicTSL:4
PVT1-229ENST00000652816.11610No protein-
 
lncRNA
---
PVT1-366ENST00000670204.11600No protein-
 
lncRNA
--GENCODE basic
PVT1-250ENST00000656402.11585No protein-
 
lncRNA
---
PVT1-261ENST00000657289.11581No protein-
 
lncRNA
---
PVT1-305ENST00000661988.11580No protein-
 
lncRNA
---
PVT1-210ENST00000521122.21578No protein-
 
lncRNA
--GENCODE basicTSL:3
PVT1-341ENST00000666777.11555No protein-
 
lncRNA
---
PVT1-300ENST00000661160.11546No protein-
 
lncRNA
---
PVT1-212ENST00000521951.11535No protein-
 
lncRNA
--TSL:1
PVT1-286ENST00000659666.11533No protein-
 
lncRNA
--GENCODE basic
PVT1-303ENST00000661625.11519No protein-
 
lncRNA
--GENCODE basic
PVT1-362ENST00000669416.11516No protein-
 
lncRNA
---
PVT1-205ENST00000517790.21513No protein-
 
lncRNA
--TSL:2
PVT1-258ENST00000657112.11499No protein-
 
lncRNA
---
PVT1-304ENST00000661830.11490No protein-
 
lncRNA
---
PVT1-237ENST00000653853.11490No protein-
 
lncRNA
---
PVT1-364ENST00000669951.11485No protein-
 
lncRNA
---
PVT1-242ENST00000654369.11482No protein-
 
lncRNA
---
PVT1-334ENST00000666080.11481No protein-
 
lncRNA
---
PVT1-312ENST00000663461.11471No protein-
 
lncRNA
---
PVT1-344ENST00000667149.11463No protein-
 
lncRNA
---
PVT1-240ENST00000654105.11460No protein-
 
lncRNA
---
PVT1-268ENST00000657596.11455No protein-
 
lncRNA
---
PVT1-266ENST00000657451.11454No protein-
 
lncRNA
---
PVT1-301ENST00000661205.11449No protein-
 
lncRNA
---
PVT1-352ENST00000668123.11433No protein-
 
lncRNA
---
PVT1-360ENST00000669272.11417No protein-
 
lncRNA
---
PVT1-241ENST00000654324.11411No protein-
 
lncRNA
---
PVT1-330ENST00000665737.11410No protein-
 
lncRNA
---
PVT1-279ENST00000658350.11402No protein-
 
lncRNA
---
PVT1-319ENST00000664299.11396No protein-
 
lncRNA
---
PVT1-375ENST00000671092.11393No protein-
 
lncRNA
---
PVT1-269ENST00000657667.11378No protein-
 
lncRNA
---
PVT1-285ENST00000659625.11363No protein-
 
lncRNA
---
PVT1-260ENST00000657211.11353No protein-
 
lncRNA
---
PVT1-373ENST00000670795.11348No protein-
 
lncRNA
---
PVT1-311ENST00000663059.11330No protein-
 
lncRNA
---
PVT1-238ENST00000653990.11329No protein-
 
lncRNA
---
PVT1-367ENST00000670223.11321No protein-
 
lncRNA
---
PVT1-257ENST00000656999.11314No protein-
 
lncRNA
---
PVT1-338ENST00000666353.11312No protein-
 
lncRNA
---
PVT1-239ENST00000654091.11311No protein-
 
lncRNA
---
PVT1-251ENST00000656411.11281No protein-
 
lncRNA
---
PVT1-358ENST00000669082.11280No protein-
 
lncRNA
---
PVT1-233ENST00000653497.11278No protein-
 
lncRNA
---
PVT1-234ENST00000653522.11275No protein-
 
lncRNA
---
PVT1-350ENST00000667714.11269No protein-
 
lncRNA
---
PVT1-236ENST00000653845.11262No protein-
 
lncRNA
---
PVT1-267ENST00000657517.11253No protein-
 
lncRNA
---
PVT1-318ENST00000664293.11206No protein-
 
lncRNA
---
PVT1-314ENST00000663753.11206No protein-
 
lncRNA
---
PVT1-321ENST00000664742.11200No protein-
 
lncRNA
---
PVT1-290ENST00000660122.11199No protein-
 
lncRNA
---
PVT1-204ENST00000517525.21194No protein-
 
lncRNA
--TSL:3
PVT1-374ENST00000671088.11191No protein-
 
lncRNA
---
PVT1-259ENST00000657183.11172No protein-
 
lncRNA
--GENCODE basic
PVT1-252ENST00000656491.11167No protein-
 
lncRNA
---
PVT1-281ENST00000658556.11163No protein-
 
lncRNA
---
PVT1-329ENST00000665721.11162No protein-
 
lncRNA
---
PVT1-359ENST00000669132.11156No protein-
 
lncRNA
---
PVT1-310ENST00000662766.11152No protein-
 
lncRNA
---
PVT1-292ENST00000660200.11139No protein-
 
lncRNA
--GENCODE basic
PVT1-306ENST00000662061.11139No protein-
 
lncRNA
---
PVT1-213ENST00000522414.21132No protein-
 
lncRNA
--TSL:2
PVT1-298ENST00000660896.11128No protein-
 
lncRNA
---
PVT1-227ENST00000652695.11126No protein-
 
lncRNA
---
PVT1-370ENST00000670602.11124No protein-
 
lncRNA
---
PVT1-246ENST00000655783.11118No protein-
 
lncRNA
---
PVT1-220ENST00000524165.61114No protein-
 
lncRNA
--TSL:2
PVT1-320ENST00000664610.11114No protein-
 
lncRNA
---
PVT1-371ENST00000670626.11114No protein-
 
lncRNA
---
PVT1-202ENST00000512617.71109No protein-
 
lncRNA
--TSL:3
PVT1-247ENST00000656077.11109No protein-
 
lncRNA
--GENCODE basic
PVT1-326ENST00000665246.11096No protein-
 
lncRNA
---
PVT1-355ENST00000668479.11091No protein-
 
lncRNA
---
PVT1-264ENST00000657384.11068No protein-
 
lncRNA
---
PVT1-363ENST00000669509.11066No protein-
 
lncRNA
---
PVT1-333ENST00000666076.11062No protein-
 
lncRNA
---
PVT1-218ENST00000523328.61047No protein-
 
lncRNA
--TSL:1
PVT1-348ENST00000667539.11041No protein-
 
lncRNA
---
PVT1-315ENST00000664139.11036No protein-
 
lncRNA
---
PVT1-221ENST00000650846.11020No protein-
 
lncRNA
---
PVT1-342ENST00000666842.11019No protein-
 
lncRNA
---
PVT1-226ENST00000652492.11017No protein-
 
lncRNA
--GENCODE basic
PVT1-255ENST00000656880.11017No protein-
 
lncRNA
---
PVT1-201ENST00000504719.71017No protein-
 
lncRNA
--TSL:2
PVT1-208ENST00000519481.61010No protein-
 
lncRNA
--TSL:2
PVT1-339ENST00000666452.11001No protein-
 
lncRNA
---
PVT1-328ENST00000665698.11000No protein-
 
lncRNA
---
PVT1-207ENST00000518528.2995No protein-
 
lncRNA
--TSL:3
PVT1-245ENST00000655594.1978No protein-
 
lncRNA
---
PVT1-271ENST00000657693.1977No protein-
 
lncRNA
---
PVT1-223ENST00000651568.1971No protein-
 
lncRNA
--GENCODE basic
PVT1-324ENST00000665166.1965No protein-
 
lncRNA
---
PVT1-325ENST00000665175.1964No protein-
 
lncRNA
---
PVT1-217ENST00000523190.6963No protein-
 
lncRNA
--TSL:3
PVT1-337ENST00000666223.1963No protein-
 
lncRNA
---
PVT1-356ENST00000668480.1956No protein-
 
lncRNA
---
PVT1-249ENST00000656396.1938No protein-
 
lncRNA
---
PVT1-248ENST00000656168.1935No protein-
 
lncRNA
--GENCODE basic
PVT1-302ENST00000661391.1924No protein-
 
lncRNA
---
PVT1-214ENST00000522875.5922No protein-
 
lncRNA
--TSL:5
PVT1-225ENST00000651664.1914No protein-
 
lncRNA
---
PVT1-276ENST00000658158.1909No protein-
 
lncRNA
--GENCODE basic
PVT1-262ENST00000657297.1907No protein-
 
lncRNA
---
PVT1-235ENST00000653608.1906No protein-
 
lncRNA
---
PVT1-256ENST00000656948.1904No protein-
 
lncRNA
---
PVT1-345ENST00000667204.1897No protein-
 
lncRNA
---
PVT1-361ENST00000669407.1890No protein-
 
lncRNA
---
PVT1-322ENST00000664924.1886No protein-
 
lncRNA
---
PVT1-369ENST00000670535.1876No protein-
 
lncRNA
---
PVT1-289ENST00000660069.1870No protein-
 
lncRNA
---
PVT1-231ENST00000652993.1866No protein-
 
lncRNA
---
PVT1-316ENST00000664214.1861No protein-
 
lncRNA
---
PVT1-309ENST00000662709.1858No protein-
 
lncRNA
---
PVT1-243ENST00000655099.1855No protein-
 
lncRNA
---
PVT1-297ENST00000660781.1854No protein-
 
lncRNA
---
PVT1-219ENST00000523427.2837No protein-
 
lncRNA
--TSL:3
PVT1-209ENST00000520913.2835No protein-
 
lncRNA
--TSL:2
PVT1-343ENST00000666878.1830No protein-
 
lncRNA
---
PVT1-230ENST00000652883.1821No protein-
 
lncRNA
---
PVT1-206ENST00000517838.6821No protein-
 
lncRNA
--TSL:2
PVT1-274ENST00000658018.1820No protein-
 
lncRNA
---
PVT1-228ENST00000652728.1812No protein-
 
lncRNA
---
PVT1-376ENST00000671587.1803No protein-
 
lncRNA
---
PVT1-287ENST00000659892.1782No protein-
 
lncRNA
---
PVT1-222ENST00000650930.1777No protein-
 
lncRNA
---
PVT1-291ENST00000660146.1764No protein-
 
lncRNA
---
PVT1-327ENST00000665372.1762No protein-
 
lncRNA
---
PVT1-280ENST00000658429.1760No protein-
 
lncRNA
---
PVT1-354ENST00000668351.1759No protein-
 
lncRNA
---
PVT1-299ENST00000660912.1754No protein-
 
lncRNA
---
PVT1-275ENST00000658065.1745No protein-
 
lncRNA
---
PVT1-244ENST00000655148.1724No protein-
 
lncRNA
---
PVT1-273ENST00000657945.1678No protein-
 
lncRNA
---
PVT1-296ENST00000660659.1673No protein-
 
lncRNA
---
PVT1-278ENST00000658305.1641No protein-
 
lncRNA
---
PVT1-232ENST00000653406.1619No protein-
 
lncRNA
---
PVT1-313ENST00000663715.1615No protein-
 
lncRNA
---
PVT1-270ENST00000657682.1611No protein-
 
lncRNA
---
PVT1-272ENST00000657844.1609No protein-
 
lncRNA
---
PVT1-335ENST00000666105.1608No protein-
 
lncRNA
---
PVT1-353ENST00000668215.1590No protein-
 
lncRNA
---
PVT1-332ENST00000666039.1520No protein-
 
lncRNA
---
PVT1-365ENST00000670009.1456No protein-
 
lncRNA
---
PVT1-277ENST00000658242.1432No protein-
 
lncRNA
---
PVT1-211ENST00000521600.5408No protein-
 
lncRNA
--TSL:2
Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,010 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000519481.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x3080e1e0)