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EnsemblEnsembl Home
Description

JPX transcript, XIST activator [Source:HGNC Symbol;Acc:HGNC:37191]

Gene Synonyms

DCBALD06, ENOX, LINC00183, NCRNA00183

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
JPX-207ENST00000602772.51692No protein-
 
lncRNA
--Ensembl CanonicalTSL:1
JPX-212ENST00000639185.19658No protein-
 
lncRNA
--GENCODE basicTSL:5
JPX-219ENST00000654005.15531No protein-
 
lncRNA
--GENCODE basic
JPX-256ENST00000664637.15488No protein-
 
lncRNA
---
JPX-232ENST00000657372.15467No protein-
 
lncRNA
---
JPX-246ENST00000660856.15352No protein-
 
lncRNA
---
JPX-266ENST00000667886.15350No protein-
 
lncRNA
---
JPX-231ENST00000657179.15113No protein-
 
lncRNA
---
JPX-273ENST00000670408.14686No protein-
 
lncRNA
---
JPX-269ENST00000668590.14628No protein-
 
lncRNA
---
JPX-224ENST00000655090.13950No protein-
 
lncRNA
---
JPX-244ENST00000660836.13758No protein-
 
lncRNA
---
JPX-245ENST00000660840.13571No protein-
 
lncRNA
---
JPX-270ENST00000669149.13463No protein-
 
lncRNA
---
JPX-215ENST00000653479.12753No protein-
 
lncRNA
---
JPX-276ENST00000670506.12112No protein-
 
lncRNA
--GENCODE basic
JPX-237ENST00000659254.12067No protein-
 
lncRNA
---
JPX-268ENST00000668488.11947No protein-
 
lncRNA
---
JPX-201ENST00000414209.61910No protein-
 
lncRNA
--TSL:2
JPX-281ENST00000671207.11893No protein-
 
lncRNA
---
JPX-279ENST00000670994.11852No protein-
 
lncRNA
---
JPX-252ENST00000663027.11818No protein-
 
lncRNA
---
JPX-225ENST00000655879.11817No protein-
 
lncRNA
---
JPX-234ENST00000657910.11746No protein-
 
lncRNA
---
JPX-282ENST00000671336.11746No protein-
 
lncRNA
---
JPX-257ENST00000665032.11744No protein-
 
lncRNA
---
JPX-262ENST00000667057.11726No protein-
 
lncRNA
---
JPX-277ENST00000670685.11689No protein-
 
lncRNA
---
JPX-247ENST00000661130.11675No protein-
 
lncRNA
---
JPX-283ENST00000671476.11624No protein-
 
lncRNA
---
JPX-213ENST00000640437.11620No protein-
 
lncRNA
--TSL:5
JPX-235ENST00000658649.11561No protein-
 
lncRNA
---
JPX-267ENST00000667937.11533No protein-
 
lncRNA
---
JPX-238ENST00000659373.11525No protein-
 
lncRNA
---
JPX-249ENST00000662120.11492No protein-
 
lncRNA
---
JPX-240ENST00000659849.11492No protein-
 
lncRNA
---
JPX-254ENST00000664295.11469No protein-
 
lncRNA
---
JPX-272ENST00000670192.11452No protein-
 
lncRNA
---
JPX-250ENST00000662239.11442No protein-
 
lncRNA
---
JPX-217ENST00000653885.11422No protein-
 
lncRNA
---
JPX-274ENST00000670464.11395No protein-
 
lncRNA
---
JPX-278ENST00000670805.11395No protein-
 
lncRNA
---
JPX-226ENST00000655994.11388No protein-
 
lncRNA
---
JPX-220ENST00000654137.11377No protein-
 
lncRNA
---
JPX-265ENST00000667645.11364No protein-
 
lncRNA
---
JPX-236ENST00000659023.11316No protein-
 
lncRNA
---
JPX-243ENST00000660546.11292No protein-
 
lncRNA
---
JPX-271ENST00000669168.11292No protein-
 
lncRNA
---
JPX-227ENST00000656263.11249No protein-
 
lncRNA
---
JPX-258ENST00000665345.11244No protein-
 
lncRNA
---
JPX-210ENST00000602938.61242No protein-
 
lncRNA
--TSL:2
JPX-259ENST00000666059.11223No protein-
 
lncRNA
---
JPX-248ENST00000661546.11217No protein-
 
lncRNA
---
JPX-275ENST00000670503.11216No protein-
 
lncRNA
---
JPX-216ENST00000653808.11213No protein-
 
lncRNA
---
JPX-229ENST00000656624.11195No protein-
 
lncRNA
---
JPX-206ENST00000602737.61166No protein-
 
lncRNA
--TSL:3
JPX-223ENST00000654995.11162No protein-
 
lncRNA
---
JPX-228ENST00000656509.11132No protein-
 
lncRNA
---
JPX-280ENST00000671021.11109No protein-
 
lncRNA
---
JPX-239ENST00000659622.11100No protein-
 
lncRNA
---
JPX-241ENST00000659852.11096No protein-
 
lncRNA
---
JPX-214ENST00000653069.11005No protein-
 
lncRNA
---
JPX-221ENST00000654196.1999No protein-
 
lncRNA
---
JPX-255ENST00000664328.1991No protein-
 
lncRNA
---
JPX-264ENST00000667573.1962No protein-
 
lncRNA
---
JPX-251ENST00000662543.1930No protein-
 
lncRNA
---
JPX-261ENST00000666493.1882No protein-
 
lncRNA
---
JPX-263ENST00000667294.1864No protein-
 
lncRNA
---
JPX-242ENST00000660087.1853No protein-
 
lncRNA
---
JPX-284ENST00000671518.1845No protein-
 
lncRNA
---
JPX-208ENST00000602895.6843No protein-
 
lncRNA
--TSL:3
JPX-204ENST00000602294.6782No protein-
 
lncRNA
--TSL:2
JPX-205ENST00000602546.5762No protein-
 
lncRNA
--TSL:3
JPX-209ENST00000602920.6753No protein-
 
lncRNA
--TSL:2
JPX-218ENST00000653929.1739No protein-
 
lncRNA
---
JPX-260ENST00000666318.1705No protein-
 
lncRNA
---
JPX-211ENST00000602985.6633No protein-
 
lncRNA
--TSL:3
JPX-222ENST00000654374.1606No protein-
 
lncRNA
---
JPX-233ENST00000657638.1561No protein-
 
lncRNA
---
JPX-253ENST00000663470.1554No protein-
 
lncRNA
---
JPX-230ENST00000657096.1488No protein-
 
lncRNA
---
JPX-203ENST00000453317.1483No protein-
 
lncRNA
--TSL:2
JPX-202ENST00000415215.1475No protein-
 
lncRNA
--TSL:5
Description

dystrophin [Source:HGNC Symbol;Acc:HGNC:2928]

Gene Synonyms

BMD, DXS142, DXS164, DXS206, DXS230, DXS239, DXS268, DXS269, DXS270, DXS272, MRX85

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
DMD-203ENST00000357033.9139923685aaENSP00000354923.3
 
Protein coding
CCDS14233A0A075B6G3 NM_004006.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
DMD-207ENST00000378677.6139323681aaENSP00000367948.2
 
Protein coding
CCDS55395A0A5H1ZRP8 -GENCODE basicAPPRIS ALT2TSL:5
DMD-211ENST00000378707.774101225aaENSP00000367979.3
 
Protein coding
CCDS48091A0A5H1ZRQ1 -GENCODE basicTSL:5
DMD-226ENST00000541735.570801115aaENSP00000444119.1
 
Protein coding
CCDS55394A0A5H1ZRR9 -GENCODE basicTSL:5
DMD-212ENST00000378723.74645635aaENSP00000367997.3
 
Protein coding
CCDS14231P11532-6 -GENCODE basicTSL:1
DMD-209ENST00000378702.82617617aaENSP00000367974.4
 
Protein coding
CCDS14234P11532-7 -GENCODE basicTSL:1
DMD-206ENST00000361471.82224622aaENSP00000354464.4
 
Protein coding
CCDS14232P11532-5 -GENCODE basicTSL:1
DMD-227ENST00000619831.599032341aaENSP00000479270.2
 
Protein coding
-A0A087WV90 -GENCODE basicTSL:5
DMD-283ENST00000684130.173611212aaENSP00000508037.1
 
Protein coding
---GENCODE basic
DMD-205ENST00000359836.573391230aaENSP00000352894.1
 
Protein coding
-A0A5H1ZRP9 -GENCODE basicTSL:5
DMD-256ENST00000682238.170371133aaENSP00000508124.1
 
Protein coding
---GENCODE basic
DMD-228ENST00000620040.569411154aaENSP00000478150.2
 
Protein coding
-A0A087WTU7 -GENCODE basicTSL:5
DMD-204ENST00000358062.667731386aaENSP00000350765.2
 
Protein coding
-H0Y304 -TSL:5CDS 5' incomplete
DMD-202ENST00000343523.75806970aaENSP00000340057.4
 
Protein coding
-A0A5H1ZRP7 -GENCODE basicTSL:5
DMD-220ENST00000474231.552091243aaENSP00000417123.1
 
Protein coding
-A0A5H1ZRQ8 -GENCODE basicTSL:5
DMD-262ENST00000682600.14633604aaENSP00000507640.1
 
Protein coding
---GENCODE basic
DMD-258ENST00000682322.14567582aaENSP00000507690.1
 
Protein coding
---GENCODE basic
DMD-237ENST00000680162.24535600aaENSP00000506634.2
 
Protein coding
---GENCODE basic
DMD-239ENST00000680355.14342507aaENSP00000506257.1
 
Protein coding
---GENCODE basic
DMD-201ENST00000288447.94024772aaENSP00000288447.4
 
Protein coding
-Q4G0X0 -GENCODE basicTSL:1
DMD-242ENST00000680768.23889584aaENSP00000506359.2
 
Protein coding
---GENCODE basic
DMD-231ENST00000679437.13711257aaENSP00000506629.1
 
Protein coding
---GENCODE basic
DMD-244ENST00000681026.13550257aaENSP00000506689.1
 
Protein coding
---GENCODE basic
DMD-240ENST00000680557.13367216aaENSP00000505164.1
 
Protein coding
-A0A0S2Z3B2 -GENCODE basic
DMD-250ENST00000681870.1268929aaENSP00000506709.1
 
Protein coding
---GENCODE basic
DMD-252ENST00000682071.12287524aaENSP00000508133.1
 
Protein coding
---CDS 3' incomplete
DMD-245ENST00000681153.12210594aaENSP00000505124.1
 
Protein coding
---GENCODE basic
DMD-208ENST00000378680.61858525aaENSP00000367951.2
 
Protein coding
-P11532-9 -GENCODE basicTSL:1
DMD-285ENST00000684237.11658491aaENSP00000507277.1
 
Protein coding
---CDS 3' incomplete
DMD-246ENST00000681334.11296227aaENSP00000506066.1
 
Protein coding
---GENCODE basic
DMD-249ENST00000681839.1996285aaENSP00000505228.1
 
Protein coding
---CDS 3' incomplete
DMD-235ENST00000679706.1873257aaENSP00000506310.1
 
Protein coding
---CDS 5' incomplete
DMD-210ENST00000378705.3714238aaENSP00000367977.3
 
Protein coding
-H0Y3E8 -TSL:5CDS 5' and 3' incomplete
DMD-225ENST00000493412.1616134aaENSP00000417725.1
 
Protein coding
-H0Y864 -TSL:2CDS 5' incomplete
DMD-214ENST00000447523.1375125aaENSP00000395904.1
 
Protein coding
-Q14174 -TSL:1CDS 5' and 3' incomplete
DMD-213ENST00000420596.5303101aaENSP00000399897.1
 
Protein coding
-Q14172 -TSL:5CDS 3' incomplete
DMD-238ENST00000680216.124231aaENSP00000506462.1
 
Protein coding
---CDS 5' incomplete
DMD-215ENST00000448370.512341aaENSP00000388559.1
 
Protein coding
-A0A0B4J1W6 -TSL:5CDS 3' incomplete
DMD-243ENST00000680961.17161816aaENSP00000506386.1
 
Nonsense mediated decay
----
DMD-233ENST00000679641.14139208aaENSP00000506135.1
 
Nonsense mediated decay
----
DMD-267ENST00000682924.11975449aaENSP00000508187.1
 
Nonsense mediated decay
----
DMD-217ENST00000471779.136230aaENSP00000417075.1
 
Nonsense mediated decay
-A0A0C4DH61 -TSL:1CDS 5' incomplete
DMD-274ENST00000683675.14837No protein-
 
Processed transcript
----
DMD-251ENST00000681989.14524No protein-
 
Processed transcript
----
DMD-275ENST00000683709.14470No protein-
 
Processed transcript
----
DMD-277ENST00000683957.14250No protein-
 
Processed transcript
----
DMD-264ENST00000682769.13629No protein-
 
Processed transcript
----
DMD-272ENST00000683509.12867No protein-
 
Processed transcript
----
DMD-269ENST00000683309.11855No protein-
 
Processed transcript
----
DMD-224ENST00000488902.5771No protein-
 
Processed transcript
---TSL:2
DMD-230ENST00000634315.1655No protein-
 
Processed transcript
---TSL:2
DMD-223ENST00000481143.2621No protein-
 
Processed transcript
---TSL:3
DMD-216ENST00000463609.2618No protein-
 
Processed transcript
---TSL:4
DMD-218ENST00000472266.1380No protein-
 
Processed transcript
---TSL:5
DMD-219ENST00000472681.1371No protein-
 
Processed transcript
---TSL:2
DMD-222ENST00000480751.1234No protein-
 
Processed transcript
---TSL:1
DMD-236ENST00000679850.18749No protein-
 
Retained intron
----
DMD-271ENST00000683503.17004No protein-
 
Retained intron
----
DMD-288ENST00000684342.16233No protein-
 
Retained intron
----
DMD-282ENST00000684103.15597No protein-
 
Retained intron
----
DMD-279ENST00000683995.15334No protein-
 
Retained intron
----
DMD-289ENST00000684350.14852No protein-
 
Retained intron
----
DMD-266ENST00000682899.14650No protein-
 
Retained intron
----
DMD-286ENST00000684247.14446No protein-
 
Retained intron
----
DMD-268ENST00000683117.14022No protein-
 
Retained intron
----
DMD-281ENST00000684072.13806No protein-
 
Retained intron
----
DMD-247ENST00000681646.13648No protein-
 
Retained intron
----
DMD-241ENST00000680701.13513No protein-
 
Retained intron
----
DMD-232ENST00000679482.13278No protein-
 
Retained intron
----
DMD-278ENST00000683985.13159No protein-
 
Retained intron
----
DMD-255ENST00000682207.13157No protein-
 
Retained intron
----
DMD-270ENST00000683450.13151No protein-
 
Retained intron
----
DMD-234ENST00000679669.12811No protein-
 
Retained intron
----
DMD-221ENST00000475732.32668No protein-
 
Retained intron
---TSL:5
DMD-280ENST00000684056.12625No protein-
 
Retained intron
----
DMD-263ENST00000682746.12427No protein-
 
Retained intron
----
DMD-253ENST00000682135.12405No protein-
 
Retained intron
----
DMD-284ENST00000684165.12341No protein-
 
Retained intron
----
DMD-287ENST00000684292.12291No protein-
 
Retained intron
----
DMD-276ENST00000683851.12257No protein-
 
Retained intron
----
DMD-273ENST00000683658.12000No protein-
 
Retained intron
----
DMD-257ENST00000682307.11899No protein-
 
Retained intron
----
DMD-261ENST00000682584.11706No protein-
 
Retained intron
----
DMD-265ENST00000682870.11632No protein-
 
Retained intron
----
DMD-290ENST00000684357.11560No protein-
 
Retained intron
----
DMD-291ENST00000684660.11525No protein-
 
Retained intron
----
DMD-248ENST00000681654.11400No protein-
 
Retained intron
----
DMD-254ENST00000682183.11286No protein-
 
Retained intron
----
DMD-260ENST00000682439.11109No protein-
 
Retained intron
----
DMD-259ENST00000682437.11056No protein-
 
Retained intron
----
DMD-229ENST00000634285.1671No protein-
 
Retained intron
---TSL:NA
Description

VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VRK1-201ENST00000216639.81663396aaENSP00000216639.3
 
Protein coding
CCDS9947Q99986 NM_003384.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VRK1-240ENST00000680756.12783396aaENSP00000506648.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-251ENST00000681344.11960396aaENSP00000506151.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-220ENST00000679816.11765396aaENSP00000506525.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-252ENST00000681355.11719396aaENSP00000506214.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-230ENST00000680335.15188375aaENSP00000505806.1
 
Protein coding
---GENCODE basic
VRK1-250ENST00000681249.12411395aaENSP00000506013.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-254ENST00000681419.11823393aaENSP00000505512.1
 
Protein coding
---GENCODE basic
VRK1-204ENST00000553683.21816420aaENSP00000451412.2
 
Protein coding
-H0YJF7 -GENCODE basicTSL:3
VRK1-239ENST00000680724.11813395aaENSP00000504891.1
 
Protein coding
---GENCODE basic
VRK1-219ENST00000679770.11704448aaENSP00000505214.1
 
Protein coding
---GENCODE basic
VRK1-249ENST00000681195.11697395aaENSP00000504933.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-238ENST00000680683.11682403aaENSP00000506334.1
 
Protein coding
---GENCODE basic
VRK1-216ENST00000679727.11673394aaENSP00000505844.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-223ENST00000679918.11638420aaENSP00000505439.1
 
Protein coding
---GENCODE basic
VRK1-241ENST00000680849.11634395aaENSP00000505602.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-256ENST00000681493.11625394aaENSP00000506429.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-212ENST00000679462.11527437aaENSP00000506011.1
 
Protein coding
---GENCODE basic
VRK1-226ENST00000680007.11525420aaENSP00000505683.1
 
Protein coding
---GENCODE basic
VRK1-242ENST00000680851.11511395aaENSP00000505159.1
 
Protein coding
---GENCODE basic
VRK1-222ENST00000679903.11444393aaENSP00000506022.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-237ENST00000680538.11435366aaENSP00000505611.1
 
Protein coding
---GENCODE basic
VRK1-263ENST00000681785.11375356aaENSP00000505166.1
 
Protein coding
---CDS 3' incomplete
VRK1-209ENST00000557352.21320394aaENSP00000451682.2
 
Protein coding
-H0YJJ9 -GENCODE basicTSL:5
VRK1-217ENST00000679736.11202244aaENSP00000506517.1
 
Protein coding
---GENCODE basic
VRK1-235ENST00000680509.11130356aaENSP00000505209.1
 
Protein coding
---CDS 3' incomplete
VRK1-248ENST00000681176.11009314aaENSP00000505454.1
 
Protein coding
---GENCODE basic
VRK1-208ENST00000557222.6922228aaENSP00000450820.2
 
Protein coding
-H0YJ50 -TSL:5CDS 3' incomplete
VRK1-257ENST00000681524.16456244aaENSP00000505783.1
 
Nonsense mediated decay
----
VRK1-234ENST00000680387.12689444aaENSP00000504908.1
 
Nonsense mediated decay
----
VRK1-247ENST00000681101.12040413aaENSP00000506564.1
 
Nonsense mediated decay
----
VRK1-224ENST00000679941.12036375aaENSP00000506520.1
 
Nonsense mediated decay
----
VRK1-244ENST00000680993.11932172aaENSP00000505511.1
 
Nonsense mediated decay
----
VRK1-253ENST00000681363.11882372aaENSP00000505564.1
 
Nonsense mediated decay
----
VRK1-262ENST00000681778.11869375aaENSP00000506049.1
 
Nonsense mediated decay
----
VRK1-218ENST00000679758.11681362aaENSP00000505539.1
 
Nonsense mediated decay
----
VRK1-225ENST00000679977.11657249aaENSP00000504897.1
 
Nonsense mediated decay
----
VRK1-210ENST00000679365.11635442aaENSP00000505882.1
 
Nonsense mediated decay
----
VRK1-258ENST00000681538.11580321aaENSP00000506662.1
 
Nonsense mediated decay
----
VRK1-215ENST00000679650.11528101aaENSP00000505156.1
 
Nonsense mediated decay
----
VRK1-243ENST00000680922.11520244aaENSP00000506480.1
 
Nonsense mediated decay
----
VRK1-261ENST00000681695.1140283aaENSP00000506225.1
 
Nonsense mediated decay
----
VRK1-259ENST00000681598.1139683aaENSP00000506128.1
 
Nonsense mediated decay
----
VRK1-236ENST00000680526.1134783aaENSP00000505595.1
 
Nonsense mediated decay
----
VRK1-260ENST00000681677.1129746aaENSP00000505010.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-214ENST00000679533.1128772aaENSP00000505873.1
 
Nonsense mediated decay
----
VRK1-255ENST00000681474.11280302aaENSP00000505569.1
 
Nonsense mediated decay
----
VRK1-245ENST00000681061.1121146aaENSP00000506083.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-246ENST00000681077.11193161aaENSP00000505642.1
 
Nonsense mediated decay
----
VRK1-233ENST00000680384.1118272aaENSP00000506237.1
 
Nonsense mediated decay
----
VRK1-232ENST00000680348.11070170aaENSP00000504922.1
 
Nonsense mediated decay
----
VRK1-228ENST00000680222.1100381aaENSP00000506647.1
 
Nonsense mediated decay
----
VRK1-231ENST00000680339.1947101aaENSP00000506470.1
 
Nonsense mediated decay
----
VRK1-221ENST00000679843.187352aaENSP00000506467.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-211ENST00000679452.178599aaENSP00000505395.1
 
Nonsense mediated decay
----
VRK1-229ENST00000680319.1750No protein-
 
Processed transcript
----
VRK1-205ENST00000555067.211646No protein-
 
Retained intron
---TSL:3
VRK1-213ENST00000679506.13648No protein-
 
Retained intron
----
VRK1-202ENST00000435624.32131No protein-
 
Retained intron
---TSL:5
VRK1-227ENST00000680084.12013No protein-
 
Retained intron
----
VRK1-203ENST00000495064.21829No protein-
 
Retained intron
---TSL:5
VRK1-206ENST00000555351.2968No protein-
 
Retained intron
---TSL:2
VRK1-207ENST00000555402.1415No protein-
 
Retained intron
---TSL:3
Description

SMG1 nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]

Gene Synonyms

ATX, KIAA0421, LIP

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SMG1-202ENST00000446231.7160623661aaENSP00000402515.3
 
Protein coding
CCDS45430Q96Q15-1 NM_015092.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
SMG1-211ENST00000565324.5124653551aaENSP00000456259.1
 
Protein coding
-J3KRA9 -TSL:1CDS 5' incomplete
SMG1-207ENST00000563235.52910853aaENSP00000455861.2
 
Protein coding
-H3BQN7 -TSL:2CDS 5' incomplete
SMG1-205ENST00000561947.52664551aaENSP00000460854.1
 
Protein coding
-I3L400 -TSL:5CDS 5' incomplete
SMG1-210ENST00000565224.52372607aaENSP00000458380.1
 
Protein coding
-I3L0W2 -GENCODE basicTSL:5
SMG1-201ENST00000330588.41588197aaENSP00000481150.1
 
Protein coding
-A0A087WXM7 -GENCODE basicTSL:5
SMG1-203ENST00000532700.61259335aaENSP00000432825.2
 
Protein coding
-E9PNP6 -TSL:2CDS 3' incomplete
SMG1-209ENST00000563836.156556aaENSP00000456025.1
 
Protein coding
-H3BR09 -TSL:5CDS 3' incomplete
SMG1-216ENST00000569122.156262aaENSP00000455453.2
 
Protein coding
-H3BPS6 -TSL:5CDS 3' incomplete
SMG1-212ENST00000566328.255085aaENSP00000484278.1
 
Protein coding
-A0A087X1K8 -TSL:5CDS 5' incomplete
SMG1-214ENST00000568038.11210321aaENSP00000458558.1
 
Nonsense mediated decay
-I3L144 -TSL:2CDS 5' incomplete
SMG1-213ENST00000567737.1721No protein-
 
Processed transcript
---TSL:3
SMG1-217ENST00000569764.14187No protein-
 
Retained intron
---TSL:5
SMG1-215ENST00000568239.12978No protein-
 
Retained intron
---TSL:1
SMG1-208ENST00000563448.12016No protein-
 
Retained intron
---TSL:2
SMG1-204ENST00000561940.1964No protein-
 
Retained intron
---TSL:2
SMG1-206ENST00000562668.1449No protein-
 
Retained intron
---TSL:3
Description

long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]

Gene Synonyms

onco-lncRNA-12

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
LINC00511-279ENST00000650033.13766No protein-
 
Retained intron
---
LINC00511-278ENST00000650016.1508No protein-
 
Retained intron
---
LINC00511-244ENST00000648631.12929No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
LINC00511-220ENST00000647652.13700No protein-
 
lncRNA
--GENCODE basic
LINC00511-215ENST00000582712.22586No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-221ENST00000647706.22532No protein-
 
lncRNA
---
LINC00511-261ENST00000649350.12527No protein-
 
lncRNA
---
LINC00511-243ENST00000648623.22522No protein-
 
lncRNA
---
LINC00511-225ENST00000647953.12292No protein-
 
lncRNA
--GENCODE basic
LINC00511-283ENST00000650131.22282No protein-
 
lncRNA
---
LINC00511-213ENST00000581549.22266No protein-
 
lncRNA
--GENCODE basicTSL:2
LINC00511-235ENST00000648401.12214No protein-
 
lncRNA
--GENCODE basic
LINC00511-274ENST00000649793.22208No protein-
 
lncRNA
---
LINC00511-280ENST00000650051.12207No protein-
 
lncRNA
---
LINC00511-289ENST00000650212.12174No protein-
 
lncRNA
--GENCODE basic
LINC00511-276ENST00000649881.12078No protein-
 
lncRNA
---
LINC00511-294ENST00000650371.12061No protein-
 
lncRNA
---
LINC00511-272ENST00000649647.12060No protein-
 
lncRNA
---
LINC00511-302ENST00000650550.22041No protein-
 
lncRNA
--GENCODE basic
LINC00511-262ENST00000649366.12028No protein-
 
lncRNA
---
LINC00511-292ENST00000650313.11995No protein-
 
lncRNA
--GENCODE basic
LINC00511-255ENST00000649250.11978No protein-
 
lncRNA
---
LINC00511-224ENST00000647871.21958No protein-
 
lncRNA
--GENCODE basic
LINC00511-252ENST00000649074.11905No protein-
 
lncRNA
--GENCODE basic
LINC00511-249ENST00000648952.11893No protein-
 
lncRNA
---
LINC00511-299ENST00000650483.11888No protein-
 
lncRNA
---
LINC00511-240ENST00000648520.11888No protein-
 
lncRNA
--GENCODE basic
LINC00511-237ENST00000648411.11843No protein-
 
lncRNA
--GENCODE basic
LINC00511-264ENST00000649433.11836No protein-
 
lncRNA
--GENCODE basic
LINC00511-234ENST00000648297.11823No protein-
 
lncRNA
---
LINC00511-257ENST00000649311.11815No protein-
 
lncRNA
---
LINC00511-253ENST00000649172.11788No protein-
 
lncRNA
---
LINC00511-216ENST00000583460.21778No protein-
 
lncRNA
--GENCODE basicTSL:5
LINC00511-275ENST00000649833.11772No protein-
 
lncRNA
---
LINC00511-245ENST00000648667.11751No protein-
 
lncRNA
--GENCODE basic
LINC00511-273ENST00000649733.11742No protein-
 
lncRNA
---
LINC00511-205ENST00000578206.21732No protein-
 
lncRNA
--TSL:3
LINC00511-201ENST00000453722.61716No protein-
 
lncRNA
--TSL:2
LINC00511-227ENST00000648069.11713No protein-
 
lncRNA
--GENCODE basic
LINC00511-218ENST00000647593.11690No protein-
 
lncRNA
---
LINC00511-266ENST00000649489.11682No protein-
 
lncRNA
---
LINC00511-230ENST00000648176.21647No protein-
 
lncRNA
---
LINC00511-202ENST00000457958.71626No protein-
 
lncRNA
--TSL:1
LINC00511-236ENST00000648403.11556No protein-
 
lncRNA
--GENCODE basic
LINC00511-260ENST00000649343.11552No protein-
 
lncRNA
---
LINC00511-306ENST00000650602.21510No protein-
 
lncRNA
--GENCODE basic
LINC00511-233ENST00000648248.11468No protein-
 
lncRNA
---
LINC00511-296ENST00000650423.11455No protein-
 
lncRNA
---
LINC00511-241ENST00000648522.11351No protein-
 
lncRNA
---
LINC00511-281ENST00000650083.11329No protein-
 
lncRNA
---
LINC00511-229ENST00000648104.21264No protein-
 
lncRNA
---
LINC00511-270ENST00000649597.11206No protein-
 
lncRNA
---
LINC00511-298ENST00000650482.11202No protein-
 
lncRNA
---
LINC00511-265ENST00000649440.21159No protein-
 
lncRNA
---
LINC00511-290ENST00000650227.11126No protein-
 
lncRNA
---
LINC00511-271ENST00000649614.11098No protein-
 
lncRNA
---
LINC00511-267ENST00000649532.11045No protein-
 
lncRNA
---
LINC00511-263ENST00000649407.11045No protein-
 
lncRNA
---
LINC00511-226ENST00000648054.11027No protein-
 
lncRNA
---
LINC00511-288ENST00000650211.1977No protein-
 
lncRNA
---
LINC00511-286ENST00000650191.1951No protein-
 
lncRNA
---
LINC00511-254ENST00000649197.1937No protein-
 
lncRNA
--GENCODE basic
LINC00511-291ENST00000650289.2862No protein-
 
lncRNA
---
LINC00511-212ENST00000581183.3860No protein-
 
lncRNA
--TSL:3
LINC00511-295ENST00000650419.1853No protein-
 
lncRNA
---
LINC00511-246ENST00000648672.2841No protein-
 
lncRNA
---
LINC00511-297ENST00000650476.1826No protein-
 
lncRNA
---
LINC00511-268ENST00000649553.1819No protein-
 
lncRNA
---
LINC00511-277ENST00000649936.1796No protein-
 
lncRNA
---
LINC00511-284ENST00000650161.1791No protein-
 
lncRNA
---
LINC00511-256ENST00000649269.1789No protein-
 
lncRNA
---
LINC00511-238ENST00000648428.1780No protein-
 
lncRNA
---
LINC00511-219ENST00000647611.1762No protein-
 
lncRNA
---
LINC00511-287ENST00000650194.2762No protein-
 
lncRNA
---
LINC00511-214ENST00000581801.6749No protein-
 
lncRNA
--TSL:3
LINC00511-231ENST00000648203.1746No protein-
 
lncRNA
---
LINC00511-248ENST00000648907.1736No protein-
 
lncRNA
---
LINC00511-210ENST00000580861.2701No protein-
 
lncRNA
--GENCODE basicTSL:4
LINC00511-301ENST00000650510.1692No protein-
 
lncRNA
---
LINC00511-285ENST00000650180.1691No protein-
 
lncRNA
---
LINC00511-250ENST00000648954.1689No protein-
 
lncRNA
---
LINC00511-208ENST00000580199.7678No protein-
 
lncRNA
--TSL:3
LINC00511-228ENST00000648088.1669No protein-
 
lncRNA
---
LINC00511-232ENST00000648220.1668No protein-
 
lncRNA
---
LINC00511-204ENST00000577828.6656No protein-
 
lncRNA
--TSL:3
LINC00511-304ENST00000650570.1617No protein-
 
lncRNA
---
LINC00511-209ENST00000580500.5561No protein-
 
lncRNA
--TSL:4
LINC00511-203ENST00000577773.2532No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-303ENST00000650554.1514No protein-
 
lncRNA
---
LINC00511-259ENST00000649332.1509No protein-
 
lncRNA
---
LINC00511-247ENST00000648840.1502No protein-
 
lncRNA
---
LINC00511-222ENST00000647735.1496No protein-
 
lncRNA
--GENCODE basic
LINC00511-211ENST00000580948.1475No protein-
 
lncRNA
--TSL:3
LINC00511-269ENST00000649595.2471No protein-
 
lncRNA
---
LINC00511-206ENST00000579631.2448No protein-
 
lncRNA
--TSL:2
LINC00511-293ENST00000650357.1325No protein-
 
lncRNA
---
LINC00511-251ENST00000649013.1266No protein-
 
lncRNA
---
LINC00511-242ENST00000648559.1261No protein-
 
lncRNA
---
LINC00511-300ENST00000650499.1231No protein-
 
lncRNA
---
LINC00511-258ENST00000649330.1230No protein-
 
lncRNA
---
LINC00511-239ENST00000648500.1219No protein-
 
lncRNA
---
LINC00511-207ENST00000580175.2208No protein-
 
lncRNA
--TSL:3
LINC00511-217ENST00000584749.2173No protein-
 
lncRNA
--TSL:3
LINC00511-305ENST00000650600.1117No protein-
 
lncRNA
---
LINC00511-223ENST00000647850.1111No protein-
 
lncRNA
---
LINC00511-282ENST00000650121.1108No protein-
 
lncRNA
---
Description

ADAM metallopeptidase domain 9 [Source:HGNC Symbol;Acc:HGNC:216]

Gene Synonyms

CORD9, KIAA0021, MCMP, MDC9, Mltng

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ADAM9-209ENST00000487273.74112819aaENSP00000419446.2
 
Protein coding
CCDS6112Q13443-1 NM_003816.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ADAM9-214ENST00000676765.14632575aaENSP00000503374.1
 
Protein coding
---GENCODE basic
ADAM9-217ENST00000677004.14448850aaENSP00000503932.1
 
Protein coding
---GENCODE basic
ADAM9-216ENST00000676936.14318214aaENSP00000504471.1
 
Protein coding
---GENCODE basic
ADAM9-221ENST00000677582.13976754aaENSP00000503648.1
 
Protein coding
---GENCODE basic
ADAM9-212ENST00000676643.13929707aaENSP00000503079.1
 
Protein coding
---GENCODE basic
ADAM9-206ENST00000481513.52387128aaENSP00000417066.1
 
Protein coding
-C9J6H5 -GENCODE basicTSL:2
ADAM9-203ENST00000466936.52053147aaENSP00000420257.1
 
Protein coding
-C9JPM3 -GENCODE basicTSL:2
ADAM9-211ENST00000676617.15077575aaENSP00000504583.1
 
Nonsense mediated decay
----
ADAM9-224ENST00000678474.14538533aaENSP00000503418.1
 
Nonsense mediated decay
----
ADAM9-219ENST00000677165.14365566aaENSP00000502865.1
 
Nonsense mediated decay
----
ADAM9-228ENST00000679268.14321446aaENSP00000503584.1
 
Nonsense mediated decay
----
ADAM9-226ENST00000678730.1426769aaENSP00000503523.1
 
Nonsense mediated decay
----
ADAM9-213ENST00000676669.14264780aaENSP00000503215.1
 
Nonsense mediated decay
----
ADAM9-222ENST00000677908.14183485aaENSP00000504640.1
 
Nonsense mediated decay
----
ADAM9-225ENST00000678540.14059446aaENSP00000503206.1
 
Nonsense mediated decay
----
ADAM9-218ENST00000677137.13901575aaENSP00000502895.1
 
Nonsense mediated decay
----
ADAM9-220ENST00000677359.13894752aaENSP00000504373.1
 
Nonsense mediated decay
----
ADAM9-201ENST00000379917.73836655aaENSP00000369249.3
 
Nonsense mediated decay
-Q13443-2 -TSL:1
ADAM9-207ENST00000481873.73793712aaENSP00000418437.3
 
Nonsense mediated decay
-A0AVL1 -TSL:1
ADAM9-204ENST00000468065.53755628aaENSP00000418737.1
 
Nonsense mediated decay
-F8WC54 -TSL:1
ADAM9-223ENST00000678253.1356569aaENSP00000503454.1
 
Nonsense mediated decay
----
ADAM9-227ENST00000678863.13088131aaENSP00000503906.1
 
Nonsense mediated decay
----
ADAM9-208ENST00000484143.25847No protein-
 
Processed transcript
---TSL:3
ADAM9-205ENST00000481058.27079No protein-
 
Retained intron
---TSL:5
ADAM9-215ENST00000676919.15326No protein-
 
Retained intron
----
ADAM9-210ENST00000676489.14735No protein-
 
Retained intron
----
ADAM9-202ENST00000463437.32838No protein-
 
Retained intron
---TSL:2
Description

BAG cochaperone 6 [Source:HGNC Symbol;Acc:HGNC:13919]

Gene Synonyms

BAT3, D6S52E, G3, Scythe

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
BAG6-274ENST00000425649.637511132aaENSP00000413341.2
 
Protein coding
-A0A0G2JK23 -Ensembl CanonicalGENCODE basicTSL:1
BAG6-279ENST00000434446.537791126aaENSP00000394839.1
 
Protein coding
-A0A024RCR6 -GENCODE basicTSL:1
BAG6-272ENST00000422756.636481126aaENSP00000407867.2
 
Protein coding
-A0A024RCR6 -GENCODE basicTSL:1
BAG6-298ENST00000552467.236261077aaENSP00000449634.2
 
Protein coding
-A0A0G2JL47 -GENCODE basicTSL:2
BAG6-299ENST00000613474.43104903aaENSP00000478966.1
 
Protein coding
-P46379-4 -GENCODE basicTSL:2
BAG6-267ENST00000415170.52407742aaENSP00000388770.1
 
Protein coding
-A0A0G2JJM1 -TSL:5CDS 3' incomplete
BAG6-285ENST00000449874.51689515aaENSP00000402863.1
 
Protein coding
-F6S6P2 -TSL:5CDS 3' incomplete
BAG6-286ENST00000452627.51056258aaENSP00000402585.1
 
Protein coding
-F6VEM6 -TSL:2CDS 3' incomplete
BAG6-288ENST00000456223.51051262aaENSP00000401440.1
 
Protein coding
-F6U341 -TSL:5CDS 3' incomplete
BAG6-275ENST00000428271.5993243aaENSP00000407500.1
 
Protein coding
-A0A1B0GX79 -TSL:3CDS 3' incomplete
BAG6-276ENST00000431345.5902259aaENSP00000393729.1
 
Protein coding
-F6X9W3 -TSL:3CDS 3' incomplete
BAG6-270ENST00000420075.5880262aaENSP00000394608.1
 
Protein coding
-F6U341 -TSL:3CDS 3' incomplete
BAG6-283ENST00000438330.5859244aaENSP00000409846.1
 
Protein coding
-F6WML8 -TSL:5CDS 3' incomplete
BAG6-284ENST00000446133.5844232aaENSP00000407175.1
 
Protein coding
-A0A0G2JJR8 -TSL:3CDS 3' incomplete
BAG6-268ENST00000416755.5807197aaENSP00000407668.1
 
Protein coding
-F6UR09 -TSL:1CDS 3' incomplete
BAG6-273ENST00000423989.5783226aaENSP00000394801.1
 
Protein coding
-H0Y710 -TSL:2CDS 5' incomplete
BAG6-278ENST00000432174.5766244aaENSP00000410343.1
 
Protein coding
-F6WML8 -TSL:3CDS 3' incomplete
BAG6-282ENST00000436859.5747215aaENSP00000392110.1
 
Protein coding
-F6XTU0 -TSL:3CDS 3' incomplete
BAG6-281ENST00000435543.5736245aaENSP00000396893.1
 
Protein coding
-A0A0G2JIA9 -TSL:5CDS 5' and 3' incomplete
BAG6-269ENST00000419635.5714238aaENSP00000388541.1
 
Protein coding
-A0A0G2JJ92 -TSL:3CDS 5' and 3' incomplete
BAG6-277ENST00000431989.5654206aaENSP00000389444.1
 
Protein coding
-F6U1F2 -TSL:2CDS 3' incomplete
BAG6-287ENST00000455689.5554185aaENSP00000399785.1
 
Protein coding
-H0Y7K4 -TSL:5CDS 5' and 3' incomplete
BAG6-271ENST00000420098.5544158aaENSP00000400968.1
 
Protein coding
-F6TC96 -TSL:3CDS 3' incomplete
BAG6-280ENST00000434874.5513136aaENSP00000391947.1
 
Protein coding
-H0Y4L1 -TSL:2CDS 5' incomplete
BAG6-289ENST00000463220.51000No protein-
 
Processed transcript
---TSL:5
BAG6-295ENST00000488142.1653No protein-
 
Processed transcript
---TSL:3
BAG6-292ENST00000466934.1642No protein-
 
Processed transcript
---TSL:3
BAG6-296ENST00000491914.5639No protein-
 
Processed transcript
---TSL:2
BAG6-294ENST00000483830.5612No protein-
 
Processed transcript
---TSL:3
BAG6-293ENST00000483249.1609No protein-
 
Processed transcript
---TSL:2
BAG6-290ENST00000464904.5488No protein-
 
Processed transcript
---TSL:2
BAG6-297ENST00000497585.1349No protein-
 
Processed transcript
---TSL:2
BAG6-291ENST00000465191.1972No protein-
 
Retained intron
---TSL:2
Description

erythrocyte membrane protein band 4.1 [Source:HGNC Symbol;Acc:HGNC:3377]

Gene Synonyms

4.1R, EL1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
EPB41-201ENST00000343067.96031864aaENSP00000345259.4
 
Protein coding
CCDS53288P11171-1 NM_001376013.1MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:5
EPB41-205ENST00000373798.55933864aaENSP00000362904.1
 
Protein coding
CCDS53288P11171-1 -GENCODE basicAPPRIS P2TSL:5
EPB41-231ENST00000647103.15772601aaENSP00000496326.1
 
Protein coding
CCDS85947A0A2R8Y7Y3 -GENCODE basicAPPRIS ALT2
EPB41-206ENST00000373800.72853588aaENSP00000362906.3
 
Protein coding
CCDS331P11171-4 -GENCODE basicTSL:1
EPB41-202ENST00000347529.72676775aaENSP00000290100.6
 
Protein coding
CCDS330P11171-5 -GENCODE basicTSL:1
EPB41-204ENST00000373797.22407720aaENSP00000362903.1
 
Protein coding
CCDS53289P11171-7 -GENCODE basicTSL:1
EPB41-219ENST00000644342.16016542aaENSP00000495138.1
 
Protein coding
-A0A2R8Y6D0 -GENCODE basic
EPB41-214ENST00000642937.25925655aaENSP00000494212.1
 
Protein coding
-A0A2R8YD30 -GENCODE basicAPPRIS ALT2
EPB41-221ENST00000644600.15595787aaENSP00000494945.1
 
Protein coding
-A0A2R8Y5Z6 -GENCODE basic
EPB41-216ENST00000643173.15496766aaENSP00000494244.1
 
Protein coding
-A0A2R8Y570 -GENCODE basic
EPB41-218ENST00000643604.15432782aaENSP00000494435.1
 
Protein coding
-A0A2R8Y5G2 -GENCODE basic
EPB41-236ENST00000649717.14367542aaENSP00000497875.1
 
Protein coding
-A0A3B3ITP0 -GENCODE basic
EPB41-239ENST00000650265.14185807aaENSP00000498003.1
 
Protein coding
-A0A3B3IU06 -GENCODE basic
EPB41-223ENST00000644848.14182387aaENSP00000493958.1
 
Protein coding
-A0A2R8Y4N6 -CDS 5' incomplete
EPB41-222ENST00000644780.14151748aaENSP00000494042.1
 
Protein coding
-A0A2R8YCW8 -GENCODE basic
EPB41-227ENST00000646189.13977565aaENSP00000496138.1
 
Protein coding
-A0A2R8Y7N0 -GENCODE basic
EPB41-212ENST00000636666.13642483aaENSP00000490911.1
 
Protein coding
-A0A1B0GWG0 -TSL:5CDS 5' incomplete
EPB41-225ENST00000645184.12964680aaENSP00000495300.1
 
Protein coding
-A0A2R8Y6G5 -GENCODE basic
EPB41-203ENST00000349460.92937841aaENSP00000317597.8
 
Protein coding
-A0A2U3TZH6 -GENCODE basicAPPRIS ALT2TSL:1
EPB41-233ENST00000648181.12756607aaENSP00000498195.1
 
Protein coding
-A0A3B3IUD6 -GENCODE basic
EPB41-228ENST00000646260.12501675aaENSP00000496675.1
 
Protein coding
-A0A2R8YFR9 -CDS 3' incomplete
EPB41-230ENST00000646871.1931310aaENSP00000496077.1
 
Protein coding
-A0A2R8Y783 -CDS 5' and 3' incomplete
EPB41-220ENST00000644470.1911227aaENSP00000494357.1
 
Protein coding
-A0A2R8Y5C8 -CDS 5' incomplete
EPB41-229ENST00000646800.16388544aaENSP00000493575.1
 
Nonsense mediated decay
-A0A2R8Y420 --
EPB41-234ENST00000648891.13124481aaENSP00000497843.1
 
Nonsense mediated decay
-A0A3B3ITC5 --
EPB41-215ENST00000643155.13029161aaENSP00000496751.1
 
Nonsense mediated decay
-A0A2R8YFU8 --
EPB41-213ENST00000642643.12424364aaENSP00000495763.1
 
Nonsense mediated decay
-A0A2R8Y6T6 -CDS 5' incomplete
EPB41-232ENST00000647918.14401No protein-
 
Processed transcript
----
EPB41-217ENST00000643302.14112No protein-
 
Processed transcript
----
EPB41-224ENST00000645111.13916No protein-
 
Processed transcript
----
EPB41-209ENST00000482464.62154No protein-
 
Processed transcript
---TSL:2
EPB41-238ENST00000650132.1560No protein-
 
Processed transcript
----
EPB41-210ENST00000488277.1262No protein-
 
Processed transcript
---TSL:3
EPB41-207ENST00000460378.15212No protein-
 
Retained intron
---TSL:1
EPB41-235ENST00000649674.14603No protein-
 
Retained intron
----
EPB41-226ENST00000645999.12971No protein-
 
Retained intron
----
EPB41-211ENST00000490308.2922No protein-
 
Retained intron
---TSL:3
EPB41-208ENST00000462032.1752No protein-
 
Retained intron
---TSL:2
EPB41-237ENST00000649992.1542No protein-
 
Retained intron
----
Description

tropomyosin 3 [Source:HGNC Symbol;Acc:HGNC:12012]

Gene Synonyms

NEM1, TRK

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
TPM3-224ENST00000651641.17064285aaENSP00000498577.1
 
Protein coding
CCDS41403P06753-1 NM_152263.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1
TPM3-223ENST00000611659.43149227aaENSP00000480520.1
 
Protein coding
CCDS72922A0A087WWU8 -GENCODE basicTSL:3
TPM3-212ENST00000368533.83148248aaENSP00000357521.3
 
Protein coding
CCDS1060P06753-2 -GENCODE basicTSL:1
TPM3-206ENST00000330188.132108248aaENSP00000339035.7
 
Protein coding
CCDS41400P06753-5 -GENCODE basicTSL:1
TPM3-205ENST00000328159.91582248aaENSP00000357520.1
 
Protein coding
CCDS60275P06753-6 -GENCODE basicTSL:2
TPM3-204ENST00000323144.121185247aaENSP00000357518.4
 
Protein coding
CCDS41401P06753-4 -GENCODE basicTSL:2
TPM3-211ENST00000368531.61115247aaENSP00000357517.2
 
Protein coding
CCDS41402P06753-3 -GENCODE basicTSL:1
TPM3-202ENST00000302206.9741158aaENSP00000307712.5
 
Protein coding
CCDS60274P06753-7 -GENCODE basicTSL:3
TPM3-201ENST00000271850.111219285aaENSP00000271850.7
 
Protein coding
-J3KN67 -GENCODE basicTSL:5
TPM3-210ENST00000368530.71111285aaENSP00000357516.3
 
Protein coding
-A0A2R2Y2Q3 -GENCODE basicTSL:1
TPM3-222ENST00000515609.158775aaENSP00000426306.1
 
Protein coding
-D6RGJ6 -TSL:3CDS 3' incomplete
TPM3-208ENST00000341485.102241247aaENSP00000341653.6
 
Nonsense mediated decay
CCDS41401P06753-4 -TSL:1
TPM3-226ENST00000651731.1279697aaENSP00000498347.1
 
Nonsense mediated decay
-A0A494C034 -CDS 5' incomplete
TPM3-207ENST00000341372.8193349aaENSP00000339378.4
 
Nonsense mediated decay
-Q5VU61 -TSL:5
TPM3-219ENST00000509409.5124849aaENSP00000426521.1
 
Nonsense mediated decay
-Q5VU61 -TSL:2
TPM3-227ENST00000651873.1121787aaENSP00000498531.1
 
Nonsense mediated decay
-A0A494C0G0 -CDS 5' incomplete
TPM3-225ENST00000651644.1810214aaENSP00000498648.1
 
Nonsense mediated decay
-A0A494C0P6 --
TPM3-220ENST00000509601.154395aaENSP00000422207.1
 
Nonsense mediated decay
-D6R904 -TSL:4
TPM3-203ENST00000312970.131968No protein-
 
Processed transcript
---TSL:5
TPM3-209ENST00000368527.7569No protein-
 
Processed transcript
---TSL:4
TPM3-214ENST00000466010.1461No protein-
 
Processed transcript
---TSL:2
TPM3-215ENST00000469717.54041No protein-
 
Retained intron
---TSL:2
TPM3-213ENST00000368545.72147No protein-
 
Retained intron
---TSL:1
TPM3-217ENST00000504663.1870No protein-
 
Retained intron
---TSL:2
TPM3-216ENST00000473036.2746No protein-
 
Retained intron
---TSL:2
TPM3-218ENST00000505010.5540No protein-
 
Retained intron
---TSL:2
TPM3-221ENST00000513769.5539No protein-
 
Retained intron
---TSL:3
Description

Pvt1 oncogene [Source:HGNC Symbol;Acc:HGNC:9709]

Gene Synonyms

LINC00079, MIR1204HG, NCRNA00079, onco-lncRNA-100

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
PVT1-224ENST00000651587.12444No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
PVT1-293ENST00000660438.12450No protein-
 
lncRNA
--GENCODE basic
PVT1-216ENST00000523068.22255No protein-
 
lncRNA
--GENCODE basicTSL:5
PVT1-323ENST00000664995.12230No protein-
 
lncRNA
--GENCODE basic
PVT1-283ENST00000659106.12187No protein-
 
lncRNA
---
PVT1-295ENST00000660631.12161No protein-
 
lncRNA
---
PVT1-265ENST00000657449.12149No protein-
 
lncRNA
--GENCODE basic
PVT1-347ENST00000667418.12143No protein-
 
lncRNA
--GENCODE basic
PVT1-336ENST00000666147.12097No protein-
 
lncRNA
---
PVT1-254ENST00000656693.11990No protein-
 
lncRNA
--GENCODE basic
PVT1-351ENST00000668098.11985No protein-
 
lncRNA
---
PVT1-331ENST00000665856.11965No protein-
 
lncRNA
--GENCODE basic
PVT1-253ENST00000656532.11909No protein-
 
lncRNA
---
PVT1-368ENST00000670532.11840No protein-
 
lncRNA
--GENCODE basic
PVT1-294ENST00000660456.11814No protein-
 
lncRNA
---
PVT1-372ENST00000670714.11756No protein-
 
lncRNA
---
PVT1-288ENST00000659912.11744No protein-
 
lncRNA
---
PVT1-282ENST00000658840.11738No protein-
 
lncRNA
--GENCODE basic
PVT1-308ENST00000662413.11727No protein-
 
lncRNA
---
PVT1-317ENST00000664265.11720No protein-
 
lncRNA
--GENCODE basic
PVT1-284ENST00000659326.11706No protein-
 
lncRNA
--GENCODE basic
PVT1-346ENST00000667305.11701No protein-
 
lncRNA
---
PVT1-203ENST00000513868.61699No protein-
 
lncRNA
--GENCODE basicTSL:1
PVT1-263ENST00000657356.11697No protein-
 
lncRNA
--GENCODE basic
PVT1-357ENST00000668619.11685No protein-
 
lncRNA
---
PVT1-307ENST00000662410.11668No protein-
 
lncRNA
---
PVT1-349ENST00000667630.11634No protein-
 
lncRNA
---
PVT1-340ENST00000666776.11628No protein-
 
lncRNA
--GENCODE basic
PVT1-215ENST00000522963.61619No protein-
 
lncRNA
--GENCODE basicTSL:4
PVT1-229ENST00000652816.11610No protein-
 
lncRNA
---
PVT1-366ENST00000670204.11600No protein-
 
lncRNA
--GENCODE basic
PVT1-250ENST00000656402.11585No protein-
 
lncRNA
---
PVT1-261ENST00000657289.11581No protein-
 
lncRNA
---
PVT1-305ENST00000661988.11580No protein-
 
lncRNA
---
PVT1-210ENST00000521122.21578No protein-
 
lncRNA
--GENCODE basicTSL:3
PVT1-341ENST00000666777.11555No protein-
 
lncRNA
---
PVT1-300ENST00000661160.11546No protein-
 
lncRNA
---
PVT1-212ENST00000521951.11535No protein-
 
lncRNA
--TSL:1
PVT1-286ENST00000659666.11533No protein-
 
lncRNA
--GENCODE basic
PVT1-303ENST00000661625.11519No protein-
 
lncRNA
--GENCODE basic
PVT1-362ENST00000669416.11516No protein-
 
lncRNA
---
PVT1-205ENST00000517790.21513No protein-
 
lncRNA
--TSL:2
PVT1-258ENST00000657112.11499No protein-
 
lncRNA
---
PVT1-304ENST00000661830.11490No protein-
 
lncRNA
---
PVT1-237ENST00000653853.11490No protein-
 
lncRNA
---
PVT1-364ENST00000669951.11485No protein-
 
lncRNA
---
PVT1-242ENST00000654369.11482No protein-
 
lncRNA
---
PVT1-334ENST00000666080.11481No protein-
 
lncRNA
---
PVT1-312ENST00000663461.11471No protein-
 
lncRNA
---
PVT1-344ENST00000667149.11463No protein-
 
lncRNA
---
PVT1-240ENST00000654105.11460No protein-
 
lncRNA
---
PVT1-268ENST00000657596.11455No protein-
 
lncRNA
---
PVT1-266ENST00000657451.11454No protein-
 
lncRNA
---
PVT1-301ENST00000661205.11449No protein-
 
lncRNA
---
PVT1-352ENST00000668123.11433No protein-
 
lncRNA
---
PVT1-360ENST00000669272.11417No protein-
 
lncRNA
---
PVT1-241ENST00000654324.11411No protein-
 
lncRNA
---
PVT1-330ENST00000665737.11410No protein-
 
lncRNA
---
PVT1-279ENST00000658350.11402No protein-
 
lncRNA
---
PVT1-319ENST00000664299.11396No protein-
 
lncRNA
---
PVT1-375ENST00000671092.11393No protein-
 
lncRNA
---
PVT1-269ENST00000657667.11378No protein-
 
lncRNA
---
PVT1-285ENST00000659625.11363No protein-
 
lncRNA
---
PVT1-260ENST00000657211.11353No protein-
 
lncRNA
---
PVT1-373ENST00000670795.11348No protein-
 
lncRNA
---
PVT1-311ENST00000663059.11330No protein-
 
lncRNA
---
PVT1-238ENST00000653990.11329No protein-
 
lncRNA
---
PVT1-367ENST00000670223.11321No protein-
 
lncRNA
---
PVT1-257ENST00000656999.11314No protein-
 
lncRNA
---
PVT1-338ENST00000666353.11312No protein-
 
lncRNA
---
PVT1-239ENST00000654091.11311No protein-
 
lncRNA
---
PVT1-251ENST00000656411.11281No protein-
 
lncRNA
---
PVT1-358ENST00000669082.11280No protein-
 
lncRNA
---
PVT1-233ENST00000653497.11278No protein-
 
lncRNA
---
PVT1-234ENST00000653522.11275No protein-
 
lncRNA
---
PVT1-350ENST00000667714.11269No protein-
 
lncRNA
---
PVT1-236ENST00000653845.11262No protein-
 
lncRNA
---
PVT1-267ENST00000657517.11253No protein-
 
lncRNA
---
PVT1-318ENST00000664293.11206No protein-
 
lncRNA
---
PVT1-314ENST00000663753.11206No protein-
 
lncRNA
---
PVT1-321ENST00000664742.11200No protein-
 
lncRNA
---
PVT1-290ENST00000660122.11199No protein-
 
lncRNA
---
PVT1-204ENST00000517525.21194No protein-
 
lncRNA
--TSL:3
PVT1-374ENST00000671088.11191No protein-
 
lncRNA
---
PVT1-259ENST00000657183.11172No protein-
 
lncRNA
--GENCODE basic
PVT1-252ENST00000656491.11167No protein-
 
lncRNA
---
PVT1-281ENST00000658556.11163No protein-
 
lncRNA
---
PVT1-329ENST00000665721.11162No protein-
 
lncRNA
---
PVT1-359ENST00000669132.11156No protein-
 
lncRNA
---
PVT1-310ENST00000662766.11152No protein-
 
lncRNA
---
PVT1-292ENST00000660200.11139No protein-
 
lncRNA
--GENCODE basic
PVT1-306ENST00000662061.11139No protein-
 
lncRNA
---
PVT1-213ENST00000522414.21132No protein-
 
lncRNA
--TSL:2
PVT1-298ENST00000660896.11128No protein-
 
lncRNA
---
PVT1-227ENST00000652695.11126No protein-
 
lncRNA
---
PVT1-370ENST00000670602.11124No protein-
 
lncRNA
---
PVT1-246ENST00000655783.11118No protein-
 
lncRNA
---
PVT1-220ENST00000524165.61114No protein-
 
lncRNA
--TSL:2
PVT1-320ENST00000664610.11114No protein-
 
lncRNA
---
PVT1-371ENST00000670626.11114No protein-
 
lncRNA
---
PVT1-202ENST00000512617.71109No protein-
 
lncRNA
--TSL:3
PVT1-247ENST00000656077.11109No protein-
 
lncRNA
--GENCODE basic
PVT1-326ENST00000665246.11096No protein-
 
lncRNA
---
PVT1-355ENST00000668479.11091No protein-
 
lncRNA
---
PVT1-264ENST00000657384.11068No protein-
 
lncRNA
---
PVT1-363ENST00000669509.11066No protein-
 
lncRNA
---
PVT1-333ENST00000666076.11062No protein-
 
lncRNA
---
PVT1-218ENST00000523328.61047No protein-
 
lncRNA
--TSL:1
PVT1-348ENST00000667539.11041No protein-
 
lncRNA
---
PVT1-315ENST00000664139.11036No protein-
 
lncRNA
---
PVT1-221ENST00000650846.11020No protein-
 
lncRNA
---
PVT1-342ENST00000666842.11019No protein-
 
lncRNA
---
PVT1-226ENST00000652492.11017No protein-
 
lncRNA
--GENCODE basic
PVT1-255ENST00000656880.11017No protein-
 
lncRNA
---
PVT1-201ENST00000504719.71017No protein-
 
lncRNA
--TSL:2
PVT1-208ENST00000519481.61010No protein-
 
lncRNA
--TSL:2
PVT1-339ENST00000666452.11001No protein-
 
lncRNA
---
PVT1-328ENST00000665698.11000No protein-
 
lncRNA
---
PVT1-207ENST00000518528.2995No protein-
 
lncRNA
--TSL:3
PVT1-245ENST00000655594.1978No protein-
 
lncRNA
---
PVT1-271ENST00000657693.1977No protein-
 
lncRNA
---
PVT1-223ENST00000651568.1971No protein-
 
lncRNA
--GENCODE basic
PVT1-324ENST00000665166.1965No protein-
 
lncRNA
---
PVT1-325ENST00000665175.1964No protein-
 
lncRNA
---
PVT1-217ENST00000523190.6963No protein-
 
lncRNA
--TSL:3
PVT1-337ENST00000666223.1963No protein-
 
lncRNA
---
PVT1-356ENST00000668480.1956No protein-
 
lncRNA
---
PVT1-249ENST00000656396.1938No protein-
 
lncRNA
---
PVT1-248ENST00000656168.1935No protein-
 
lncRNA
--GENCODE basic
PVT1-302ENST00000661391.1924No protein-
 
lncRNA
---
PVT1-214ENST00000522875.5922No protein-
 
lncRNA
--TSL:5
PVT1-225ENST00000651664.1914No protein-
 
lncRNA
---
PVT1-276ENST00000658158.1909No protein-
 
lncRNA
--GENCODE basic
PVT1-262ENST00000657297.1907No protein-
 
lncRNA
---
PVT1-235ENST00000653608.1906No protein-
 
lncRNA
---
PVT1-256ENST00000656948.1904No protein-
 
lncRNA
---
PVT1-345ENST00000667204.1897No protein-
 
lncRNA
---
PVT1-361ENST00000669407.1890No protein-
 
lncRNA
---
PVT1-322ENST00000664924.1886No protein-
 
lncRNA
---
PVT1-369ENST00000670535.1876No protein-
 
lncRNA
---
PVT1-289ENST00000660069.1870No protein-
 
lncRNA
---
PVT1-231ENST00000652993.1866No protein-
 
lncRNA
---
PVT1-316ENST00000664214.1861No protein-
 
lncRNA
---
PVT1-309ENST00000662709.1858No protein-
 
lncRNA
---
PVT1-243ENST00000655099.1855No protein-
 
lncRNA
---
PVT1-297ENST00000660781.1854No protein-
 
lncRNA
---
PVT1-219ENST00000523427.2837No protein-
 
lncRNA
--TSL:3
PVT1-209ENST00000520913.2835No protein-
 
lncRNA
--TSL:2
PVT1-343ENST00000666878.1830No protein-
 
lncRNA
---
PVT1-230ENST00000652883.1821No protein-
 
lncRNA
---
PVT1-206ENST00000517838.6821No protein-
 
lncRNA
--TSL:2
PVT1-274ENST00000658018.1820No protein-
 
lncRNA
---
PVT1-228ENST00000652728.1812No protein-
 
lncRNA
---
PVT1-376ENST00000671587.1803No protein-
 
lncRNA
---
PVT1-287ENST00000659892.1782No protein-
 
lncRNA
---
PVT1-222ENST00000650930.1777No protein-
 
lncRNA
---
PVT1-291ENST00000660146.1764No protein-
 
lncRNA
---
PVT1-327ENST00000665372.1762No protein-
 
lncRNA
---
PVT1-280ENST00000658429.1760No protein-
 
lncRNA
---
PVT1-354ENST00000668351.1759No protein-
 
lncRNA
---
PVT1-299ENST00000660912.1754No protein-
 
lncRNA
---
PVT1-275ENST00000658065.1745No protein-
 
lncRNA
---
PVT1-244ENST00000655148.1724No protein-
 
lncRNA
---
PVT1-273ENST00000657945.1678No protein-
 
lncRNA
---
PVT1-296ENST00000660659.1673No protein-
 
lncRNA
---
PVT1-278ENST00000658305.1641No protein-
 
lncRNA
---
PVT1-232ENST00000653406.1619No protein-
 
lncRNA
---
PVT1-313ENST00000663715.1615No protein-
 
lncRNA
---
PVT1-270ENST00000657682.1611No protein-
 
lncRNA
---
PVT1-272ENST00000657844.1609No protein-
 
lncRNA
---
PVT1-335ENST00000666105.1608No protein-
 
lncRNA
---
PVT1-353ENST00000668215.1590No protein-
 
lncRNA
---
PVT1-332ENST00000666039.1520No protein-
 
lncRNA
---
PVT1-365ENST00000670009.1456No protein-
 
lncRNA
---
PVT1-277ENST00000658242.1432No protein-
 
lncRNA
---
PVT1-211ENST00000521600.5408No protein-
 
lncRNA
--TSL:2
Statistics

Exons: 4, Coding exons: 0, Transcript length: 904 bps,

Version

ENST00000656948.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript-based displays

    HASH(0x305454a0)