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EnsemblEnsembl Home
Description

JPX transcript, XIST activator [Source:HGNC Symbol;Acc:HGNC:37191]

Gene Synonyms

DCBALD06, ENOX, LINC00183, NCRNA00183

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
JPX-207ENST00000602772.51692No protein-
 
lncRNA
--Ensembl CanonicalTSL:1
JPX-212ENST00000639185.19658No protein-
 
lncRNA
--GENCODE basicTSL:5
JPX-219ENST00000654005.15531No protein-
 
lncRNA
--GENCODE basic
JPX-256ENST00000664637.15488No protein-
 
lncRNA
---
JPX-232ENST00000657372.15467No protein-
 
lncRNA
---
JPX-246ENST00000660856.15352No protein-
 
lncRNA
---
JPX-266ENST00000667886.15350No protein-
 
lncRNA
---
JPX-231ENST00000657179.15113No protein-
 
lncRNA
---
JPX-273ENST00000670408.14686No protein-
 
lncRNA
---
JPX-269ENST00000668590.14628No protein-
 
lncRNA
---
JPX-224ENST00000655090.13950No protein-
 
lncRNA
---
JPX-244ENST00000660836.13758No protein-
 
lncRNA
---
JPX-245ENST00000660840.13571No protein-
 
lncRNA
---
JPX-270ENST00000669149.13463No protein-
 
lncRNA
---
JPX-215ENST00000653479.12753No protein-
 
lncRNA
---
JPX-276ENST00000670506.12112No protein-
 
lncRNA
--GENCODE basic
JPX-237ENST00000659254.12067No protein-
 
lncRNA
---
JPX-268ENST00000668488.11947No protein-
 
lncRNA
---
JPX-201ENST00000414209.61910No protein-
 
lncRNA
--TSL:2
JPX-281ENST00000671207.11893No protein-
 
lncRNA
---
JPX-279ENST00000670994.11852No protein-
 
lncRNA
---
JPX-252ENST00000663027.11818No protein-
 
lncRNA
---
JPX-225ENST00000655879.11817No protein-
 
lncRNA
---
JPX-234ENST00000657910.11746No protein-
 
lncRNA
---
JPX-282ENST00000671336.11746No protein-
 
lncRNA
---
JPX-257ENST00000665032.11744No protein-
 
lncRNA
---
JPX-262ENST00000667057.11726No protein-
 
lncRNA
---
JPX-277ENST00000670685.11689No protein-
 
lncRNA
---
JPX-247ENST00000661130.11675No protein-
 
lncRNA
---
JPX-283ENST00000671476.11624No protein-
 
lncRNA
---
JPX-213ENST00000640437.11620No protein-
 
lncRNA
--TSL:5
JPX-235ENST00000658649.11561No protein-
 
lncRNA
---
JPX-267ENST00000667937.11533No protein-
 
lncRNA
---
JPX-238ENST00000659373.11525No protein-
 
lncRNA
---
JPX-249ENST00000662120.11492No protein-
 
lncRNA
---
JPX-240ENST00000659849.11492No protein-
 
lncRNA
---
JPX-254ENST00000664295.11469No protein-
 
lncRNA
---
JPX-272ENST00000670192.11452No protein-
 
lncRNA
---
JPX-250ENST00000662239.11442No protein-
 
lncRNA
---
JPX-217ENST00000653885.11422No protein-
 
lncRNA
---
JPX-274ENST00000670464.11395No protein-
 
lncRNA
---
JPX-278ENST00000670805.11395No protein-
 
lncRNA
---
JPX-226ENST00000655994.11388No protein-
 
lncRNA
---
JPX-220ENST00000654137.11377No protein-
 
lncRNA
---
JPX-265ENST00000667645.11364No protein-
 
lncRNA
---
JPX-236ENST00000659023.11316No protein-
 
lncRNA
---
JPX-243ENST00000660546.11292No protein-
 
lncRNA
---
JPX-271ENST00000669168.11292No protein-
 
lncRNA
---
JPX-227ENST00000656263.11249No protein-
 
lncRNA
---
JPX-258ENST00000665345.11244No protein-
 
lncRNA
---
JPX-210ENST00000602938.61242No protein-
 
lncRNA
--TSL:2
JPX-259ENST00000666059.11223No protein-
 
lncRNA
---
JPX-248ENST00000661546.11217No protein-
 
lncRNA
---
JPX-275ENST00000670503.11216No protein-
 
lncRNA
---
JPX-216ENST00000653808.11213No protein-
 
lncRNA
---
JPX-229ENST00000656624.11195No protein-
 
lncRNA
---
JPX-206ENST00000602737.61166No protein-
 
lncRNA
--TSL:3
JPX-223ENST00000654995.11162No protein-
 
lncRNA
---
JPX-228ENST00000656509.11132No protein-
 
lncRNA
---
JPX-280ENST00000671021.11109No protein-
 
lncRNA
---
JPX-239ENST00000659622.11100No protein-
 
lncRNA
---
JPX-241ENST00000659852.11096No protein-
 
lncRNA
---
JPX-214ENST00000653069.11005No protein-
 
lncRNA
---
JPX-221ENST00000654196.1999No protein-
 
lncRNA
---
JPX-255ENST00000664328.1991No protein-
 
lncRNA
---
JPX-264ENST00000667573.1962No protein-
 
lncRNA
---
JPX-251ENST00000662543.1930No protein-
 
lncRNA
---
JPX-261ENST00000666493.1882No protein-
 
lncRNA
---
JPX-263ENST00000667294.1864No protein-
 
lncRNA
---
JPX-242ENST00000660087.1853No protein-
 
lncRNA
---
JPX-284ENST00000671518.1845No protein-
 
lncRNA
---
JPX-208ENST00000602895.6843No protein-
 
lncRNA
--TSL:3
JPX-204ENST00000602294.6782No protein-
 
lncRNA
--TSL:2
JPX-205ENST00000602546.5762No protein-
 
lncRNA
--TSL:3
JPX-209ENST00000602920.6753No protein-
 
lncRNA
--TSL:2
JPX-218ENST00000653929.1739No protein-
 
lncRNA
---
JPX-260ENST00000666318.1705No protein-
 
lncRNA
---
JPX-211ENST00000602985.6633No protein-
 
lncRNA
--TSL:3
JPX-222ENST00000654374.1606No protein-
 
lncRNA
---
JPX-233ENST00000657638.1561No protein-
 
lncRNA
---
JPX-253ENST00000663470.1554No protein-
 
lncRNA
---
JPX-230ENST00000657096.1488No protein-
 
lncRNA
---
JPX-203ENST00000453317.1483No protein-
 
lncRNA
--TSL:2
JPX-202ENST00000415215.1475No protein-
 
lncRNA
--TSL:5
Description

dystrophin [Source:HGNC Symbol;Acc:HGNC:2928]

Gene Synonyms

BMD, DXS142, DXS164, DXS206, DXS230, DXS239, DXS268, DXS269, DXS270, DXS272, MRX85

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
DMD-203ENST00000357033.9139923685aaENSP00000354923.3
 
Protein coding
CCDS14233A0A075B6G3 NM_004006.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
DMD-207ENST00000378677.6139323681aaENSP00000367948.2
 
Protein coding
CCDS55395A0A5H1ZRP8 -GENCODE basicAPPRIS ALT2TSL:5
DMD-211ENST00000378707.774101225aaENSP00000367979.3
 
Protein coding
CCDS48091A0A5H1ZRQ1 -GENCODE basicTSL:5
DMD-226ENST00000541735.570801115aaENSP00000444119.1
 
Protein coding
CCDS55394A0A5H1ZRR9 -GENCODE basicTSL:5
DMD-212ENST00000378723.74645635aaENSP00000367997.3
 
Protein coding
CCDS14231P11532-6 -GENCODE basicTSL:1
DMD-209ENST00000378702.82617617aaENSP00000367974.4
 
Protein coding
CCDS14234P11532-7 -GENCODE basicTSL:1
DMD-206ENST00000361471.82224622aaENSP00000354464.4
 
Protein coding
CCDS14232P11532-5 -GENCODE basicTSL:1
DMD-227ENST00000619831.599032341aaENSP00000479270.2
 
Protein coding
-A0A087WV90 -GENCODE basicTSL:5
DMD-283ENST00000684130.173611212aaENSP00000508037.1
 
Protein coding
---GENCODE basic
DMD-205ENST00000359836.573391230aaENSP00000352894.1
 
Protein coding
-A0A5H1ZRP9 -GENCODE basicTSL:5
DMD-256ENST00000682238.170371133aaENSP00000508124.1
 
Protein coding
---GENCODE basic
DMD-228ENST00000620040.569411154aaENSP00000478150.2
 
Protein coding
-A0A087WTU7 -GENCODE basicTSL:5
DMD-204ENST00000358062.667731386aaENSP00000350765.2
 
Protein coding
-H0Y304 -TSL:5CDS 5' incomplete
DMD-202ENST00000343523.75806970aaENSP00000340057.4
 
Protein coding
-A0A5H1ZRP7 -GENCODE basicTSL:5
DMD-220ENST00000474231.552091243aaENSP00000417123.1
 
Protein coding
-A0A5H1ZRQ8 -GENCODE basicTSL:5
DMD-262ENST00000682600.14633604aaENSP00000507640.1
 
Protein coding
---GENCODE basic
DMD-258ENST00000682322.14567582aaENSP00000507690.1
 
Protein coding
---GENCODE basic
DMD-237ENST00000680162.24535600aaENSP00000506634.2
 
Protein coding
---GENCODE basic
DMD-239ENST00000680355.14342507aaENSP00000506257.1
 
Protein coding
---GENCODE basic
DMD-201ENST00000288447.94024772aaENSP00000288447.4
 
Protein coding
-Q4G0X0 -GENCODE basicTSL:1
DMD-242ENST00000680768.23889584aaENSP00000506359.2
 
Protein coding
---GENCODE basic
DMD-231ENST00000679437.13711257aaENSP00000506629.1
 
Protein coding
---GENCODE basic
DMD-244ENST00000681026.13550257aaENSP00000506689.1
 
Protein coding
---GENCODE basic
DMD-240ENST00000680557.13367216aaENSP00000505164.1
 
Protein coding
-A0A0S2Z3B2 -GENCODE basic
DMD-250ENST00000681870.1268929aaENSP00000506709.1
 
Protein coding
---GENCODE basic
DMD-252ENST00000682071.12287524aaENSP00000508133.1
 
Protein coding
---CDS 3' incomplete
DMD-245ENST00000681153.12210594aaENSP00000505124.1
 
Protein coding
---GENCODE basic
DMD-208ENST00000378680.61858525aaENSP00000367951.2
 
Protein coding
-P11532-9 -GENCODE basicTSL:1
DMD-285ENST00000684237.11658491aaENSP00000507277.1
 
Protein coding
---CDS 3' incomplete
DMD-246ENST00000681334.11296227aaENSP00000506066.1
 
Protein coding
---GENCODE basic
DMD-249ENST00000681839.1996285aaENSP00000505228.1
 
Protein coding
---CDS 3' incomplete
DMD-235ENST00000679706.1873257aaENSP00000506310.1
 
Protein coding
---CDS 5' incomplete
DMD-210ENST00000378705.3714238aaENSP00000367977.3
 
Protein coding
-H0Y3E8 -TSL:5CDS 5' and 3' incomplete
DMD-225ENST00000493412.1616134aaENSP00000417725.1
 
Protein coding
-H0Y864 -TSL:2CDS 5' incomplete
DMD-214ENST00000447523.1375125aaENSP00000395904.1
 
Protein coding
-Q14174 -TSL:1CDS 5' and 3' incomplete
DMD-213ENST00000420596.5303101aaENSP00000399897.1
 
Protein coding
-Q14172 -TSL:5CDS 3' incomplete
DMD-238ENST00000680216.124231aaENSP00000506462.1
 
Protein coding
---CDS 5' incomplete
DMD-215ENST00000448370.512341aaENSP00000388559.1
 
Protein coding
-A0A0B4J1W6 -TSL:5CDS 3' incomplete
DMD-243ENST00000680961.17161816aaENSP00000506386.1
 
Nonsense mediated decay
----
DMD-233ENST00000679641.14139208aaENSP00000506135.1
 
Nonsense mediated decay
----
DMD-267ENST00000682924.11975449aaENSP00000508187.1
 
Nonsense mediated decay
----
DMD-217ENST00000471779.136230aaENSP00000417075.1
 
Nonsense mediated decay
-A0A0C4DH61 -TSL:1CDS 5' incomplete
DMD-274ENST00000683675.14837No protein-
 
Processed transcript
----
DMD-251ENST00000681989.14524No protein-
 
Processed transcript
----
DMD-275ENST00000683709.14470No protein-
 
Processed transcript
----
DMD-277ENST00000683957.14250No protein-
 
Processed transcript
----
DMD-264ENST00000682769.13629No protein-
 
Processed transcript
----
DMD-272ENST00000683509.12867No protein-
 
Processed transcript
----
DMD-269ENST00000683309.11855No protein-
 
Processed transcript
----
DMD-224ENST00000488902.5771No protein-
 
Processed transcript
---TSL:2
DMD-230ENST00000634315.1655No protein-
 
Processed transcript
---TSL:2
DMD-223ENST00000481143.2621No protein-
 
Processed transcript
---TSL:3
DMD-216ENST00000463609.2618No protein-
 
Processed transcript
---TSL:4
DMD-218ENST00000472266.1380No protein-
 
Processed transcript
---TSL:5
DMD-219ENST00000472681.1371No protein-
 
Processed transcript
---TSL:2
DMD-222ENST00000480751.1234No protein-
 
Processed transcript
---TSL:1
DMD-236ENST00000679850.18749No protein-
 
Retained intron
----
DMD-271ENST00000683503.17004No protein-
 
Retained intron
----
DMD-288ENST00000684342.16233No protein-
 
Retained intron
----
DMD-282ENST00000684103.15597No protein-
 
Retained intron
----
DMD-279ENST00000683995.15334No protein-
 
Retained intron
----
DMD-289ENST00000684350.14852No protein-
 
Retained intron
----
DMD-266ENST00000682899.14650No protein-
 
Retained intron
----
DMD-286ENST00000684247.14446No protein-
 
Retained intron
----
DMD-268ENST00000683117.14022No protein-
 
Retained intron
----
DMD-281ENST00000684072.13806No protein-
 
Retained intron
----
DMD-247ENST00000681646.13648No protein-
 
Retained intron
----
DMD-241ENST00000680701.13513No protein-
 
Retained intron
----
DMD-232ENST00000679482.13278No protein-
 
Retained intron
----
DMD-278ENST00000683985.13159No protein-
 
Retained intron
----
DMD-255ENST00000682207.13157No protein-
 
Retained intron
----
DMD-270ENST00000683450.13151No protein-
 
Retained intron
----
DMD-234ENST00000679669.12811No protein-
 
Retained intron
----
DMD-221ENST00000475732.32668No protein-
 
Retained intron
---TSL:5
DMD-280ENST00000684056.12625No protein-
 
Retained intron
----
DMD-263ENST00000682746.12427No protein-
 
Retained intron
----
DMD-253ENST00000682135.12405No protein-
 
Retained intron
----
DMD-284ENST00000684165.12341No protein-
 
Retained intron
----
DMD-287ENST00000684292.12291No protein-
 
Retained intron
----
DMD-276ENST00000683851.12257No protein-
 
Retained intron
----
DMD-273ENST00000683658.12000No protein-
 
Retained intron
----
DMD-257ENST00000682307.11899No protein-
 
Retained intron
----
DMD-261ENST00000682584.11706No protein-
 
Retained intron
----
DMD-265ENST00000682870.11632No protein-
 
Retained intron
----
DMD-290ENST00000684357.11560No protein-
 
Retained intron
----
DMD-291ENST00000684660.11525No protein-
 
Retained intron
----
DMD-248ENST00000681654.11400No protein-
 
Retained intron
----
DMD-254ENST00000682183.11286No protein-
 
Retained intron
----
DMD-260ENST00000682439.11109No protein-
 
Retained intron
----
DMD-259ENST00000682437.11056No protein-
 
Retained intron
----
DMD-229ENST00000634285.1671No protein-
 
Retained intron
---TSL:NA
Description

VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VRK1-201ENST00000216639.81663396aaENSP00000216639.3
 
Protein coding
CCDS9947Q99986 NM_003384.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VRK1-240ENST00000680756.12783396aaENSP00000506648.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-251ENST00000681344.11960396aaENSP00000506151.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-220ENST00000679816.11765396aaENSP00000506525.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-252ENST00000681355.11719396aaENSP00000506214.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-230ENST00000680335.15188375aaENSP00000505806.1
 
Protein coding
---GENCODE basic
VRK1-250ENST00000681249.12411395aaENSP00000506013.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-254ENST00000681419.11823393aaENSP00000505512.1
 
Protein coding
---GENCODE basic
VRK1-204ENST00000553683.21816420aaENSP00000451412.2
 
Protein coding
-H0YJF7 -GENCODE basicTSL:3
VRK1-239ENST00000680724.11813395aaENSP00000504891.1
 
Protein coding
---GENCODE basic
VRK1-219ENST00000679770.11704448aaENSP00000505214.1
 
Protein coding
---GENCODE basic
VRK1-249ENST00000681195.11697395aaENSP00000504933.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-238ENST00000680683.11682403aaENSP00000506334.1
 
Protein coding
---GENCODE basic
VRK1-216ENST00000679727.11673394aaENSP00000505844.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-223ENST00000679918.11638420aaENSP00000505439.1
 
Protein coding
---GENCODE basic
VRK1-241ENST00000680849.11634395aaENSP00000505602.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-256ENST00000681493.11625394aaENSP00000506429.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-212ENST00000679462.11527437aaENSP00000506011.1
 
Protein coding
---GENCODE basic
VRK1-226ENST00000680007.11525420aaENSP00000505683.1
 
Protein coding
---GENCODE basic
VRK1-242ENST00000680851.11511395aaENSP00000505159.1
 
Protein coding
---GENCODE basic
VRK1-222ENST00000679903.11444393aaENSP00000506022.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-237ENST00000680538.11435366aaENSP00000505611.1
 
Protein coding
---GENCODE basic
VRK1-263ENST00000681785.11375356aaENSP00000505166.1
 
Protein coding
---CDS 3' incomplete
VRK1-209ENST00000557352.21320394aaENSP00000451682.2
 
Protein coding
-H0YJJ9 -GENCODE basicTSL:5
VRK1-217ENST00000679736.11202244aaENSP00000506517.1
 
Protein coding
---GENCODE basic
VRK1-235ENST00000680509.11130356aaENSP00000505209.1
 
Protein coding
---CDS 3' incomplete
VRK1-248ENST00000681176.11009314aaENSP00000505454.1
 
Protein coding
---GENCODE basic
VRK1-208ENST00000557222.6922228aaENSP00000450820.2
 
Protein coding
-H0YJ50 -TSL:5CDS 3' incomplete
VRK1-257ENST00000681524.16456244aaENSP00000505783.1
 
Nonsense mediated decay
----
VRK1-234ENST00000680387.12689444aaENSP00000504908.1
 
Nonsense mediated decay
----
VRK1-247ENST00000681101.12040413aaENSP00000506564.1
 
Nonsense mediated decay
----
VRK1-224ENST00000679941.12036375aaENSP00000506520.1
 
Nonsense mediated decay
----
VRK1-244ENST00000680993.11932172aaENSP00000505511.1
 
Nonsense mediated decay
----
VRK1-253ENST00000681363.11882372aaENSP00000505564.1
 
Nonsense mediated decay
----
VRK1-262ENST00000681778.11869375aaENSP00000506049.1
 
Nonsense mediated decay
----
VRK1-218ENST00000679758.11681362aaENSP00000505539.1
 
Nonsense mediated decay
----
VRK1-225ENST00000679977.11657249aaENSP00000504897.1
 
Nonsense mediated decay
----
VRK1-210ENST00000679365.11635442aaENSP00000505882.1
 
Nonsense mediated decay
----
VRK1-258ENST00000681538.11580321aaENSP00000506662.1
 
Nonsense mediated decay
----
VRK1-215ENST00000679650.11528101aaENSP00000505156.1
 
Nonsense mediated decay
----
VRK1-243ENST00000680922.11520244aaENSP00000506480.1
 
Nonsense mediated decay
----
VRK1-261ENST00000681695.1140283aaENSP00000506225.1
 
Nonsense mediated decay
----
VRK1-259ENST00000681598.1139683aaENSP00000506128.1
 
Nonsense mediated decay
----
VRK1-236ENST00000680526.1134783aaENSP00000505595.1
 
Nonsense mediated decay
----
VRK1-260ENST00000681677.1129746aaENSP00000505010.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-214ENST00000679533.1128772aaENSP00000505873.1
 
Nonsense mediated decay
----
VRK1-255ENST00000681474.11280302aaENSP00000505569.1
 
Nonsense mediated decay
----
VRK1-245ENST00000681061.1121146aaENSP00000506083.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-246ENST00000681077.11193161aaENSP00000505642.1
 
Nonsense mediated decay
----
VRK1-233ENST00000680384.1118272aaENSP00000506237.1
 
Nonsense mediated decay
----
VRK1-232ENST00000680348.11070170aaENSP00000504922.1
 
Nonsense mediated decay
----
VRK1-228ENST00000680222.1100381aaENSP00000506647.1
 
Nonsense mediated decay
----
VRK1-231ENST00000680339.1947101aaENSP00000506470.1
 
Nonsense mediated decay
----
VRK1-221ENST00000679843.187352aaENSP00000506467.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-211ENST00000679452.178599aaENSP00000505395.1
 
Nonsense mediated decay
----
VRK1-229ENST00000680319.1750No protein-
 
Processed transcript
----
VRK1-205ENST00000555067.211646No protein-
 
Retained intron
---TSL:3
VRK1-213ENST00000679506.13648No protein-
 
Retained intron
----
VRK1-202ENST00000435624.32131No protein-
 
Retained intron
---TSL:5
VRK1-227ENST00000680084.12013No protein-
 
Retained intron
----
VRK1-203ENST00000495064.21829No protein-
 
Retained intron
---TSL:5
VRK1-206ENST00000555351.2968No protein-
 
Retained intron
---TSL:2
VRK1-207ENST00000555402.1415No protein-
 
Retained intron
---TSL:3
Description

SMG1 nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]

Gene Synonyms

ATX, KIAA0421, LIP

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SMG1-202ENST00000446231.7160623661aaENSP00000402515.3
 
Protein coding
CCDS45430Q96Q15-1 NM_015092.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
SMG1-211ENST00000565324.5124653551aaENSP00000456259.1
 
Protein coding
-J3KRA9 -TSL:1CDS 5' incomplete
SMG1-207ENST00000563235.52910853aaENSP00000455861.2
 
Protein coding
-H3BQN7 -TSL:2CDS 5' incomplete
SMG1-205ENST00000561947.52664551aaENSP00000460854.1
 
Protein coding
-I3L400 -TSL:5CDS 5' incomplete
SMG1-210ENST00000565224.52372607aaENSP00000458380.1
 
Protein coding
-I3L0W2 -GENCODE basicTSL:5
SMG1-201ENST00000330588.41588197aaENSP00000481150.1
 
Protein coding
-A0A087WXM7 -GENCODE basicTSL:5
SMG1-203ENST00000532700.61259335aaENSP00000432825.2
 
Protein coding
-E9PNP6 -TSL:2CDS 3' incomplete
SMG1-209ENST00000563836.156556aaENSP00000456025.1
 
Protein coding
-H3BR09 -TSL:5CDS 3' incomplete
SMG1-216ENST00000569122.156262aaENSP00000455453.2
 
Protein coding
-H3BPS6 -TSL:5CDS 3' incomplete
SMG1-212ENST00000566328.255085aaENSP00000484278.1
 
Protein coding
-A0A087X1K8 -TSL:5CDS 5' incomplete
SMG1-214ENST00000568038.11210321aaENSP00000458558.1
 
Nonsense mediated decay
-I3L144 -TSL:2CDS 5' incomplete
SMG1-213ENST00000567737.1721No protein-
 
Processed transcript
---TSL:3
SMG1-217ENST00000569764.14187No protein-
 
Retained intron
---TSL:5
SMG1-215ENST00000568239.12978No protein-
 
Retained intron
---TSL:1
SMG1-208ENST00000563448.12016No protein-
 
Retained intron
---TSL:2
SMG1-204ENST00000561940.1964No protein-
 
Retained intron
---TSL:2
SMG1-206ENST00000562668.1449No protein-
 
Retained intron
---TSL:3
Description

long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]

Gene Synonyms

onco-lncRNA-12

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
LINC00511-279ENST00000650033.13766No protein-
 
Retained intron
---
LINC00511-278ENST00000650016.1508No protein-
 
Retained intron
---
LINC00511-244ENST00000648631.12929No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
LINC00511-220ENST00000647652.13700No protein-
 
lncRNA
--GENCODE basic
LINC00511-215ENST00000582712.22586No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-221ENST00000647706.22532No protein-
 
lncRNA
---
LINC00511-261ENST00000649350.12527No protein-
 
lncRNA
---
LINC00511-243ENST00000648623.22522No protein-
 
lncRNA
---
LINC00511-225ENST00000647953.12292No protein-
 
lncRNA
--GENCODE basic
LINC00511-283ENST00000650131.22282No protein-
 
lncRNA
---
LINC00511-213ENST00000581549.22266No protein-
 
lncRNA
--GENCODE basicTSL:2
LINC00511-235ENST00000648401.12214No protein-
 
lncRNA
--GENCODE basic
LINC00511-274ENST00000649793.22208No protein-
 
lncRNA
---
LINC00511-280ENST00000650051.12207No protein-
 
lncRNA
---
LINC00511-289ENST00000650212.12174No protein-
 
lncRNA
--GENCODE basic
LINC00511-276ENST00000649881.12078No protein-
 
lncRNA
---
LINC00511-294ENST00000650371.12061No protein-
 
lncRNA
---
LINC00511-272ENST00000649647.12060No protein-
 
lncRNA
---
LINC00511-302ENST00000650550.22041No protein-
 
lncRNA
--GENCODE basic
LINC00511-262ENST00000649366.12028No protein-
 
lncRNA
---
LINC00511-292ENST00000650313.11995No protein-
 
lncRNA
--GENCODE basic
LINC00511-255ENST00000649250.11978No protein-
 
lncRNA
---
LINC00511-224ENST00000647871.21958No protein-
 
lncRNA
--GENCODE basic
LINC00511-252ENST00000649074.11905No protein-
 
lncRNA
--GENCODE basic
LINC00511-249ENST00000648952.11893No protein-
 
lncRNA
---
LINC00511-299ENST00000650483.11888No protein-
 
lncRNA
---
LINC00511-240ENST00000648520.11888No protein-
 
lncRNA
--GENCODE basic
LINC00511-237ENST00000648411.11843No protein-
 
lncRNA
--GENCODE basic
LINC00511-264ENST00000649433.11836No protein-
 
lncRNA
--GENCODE basic
LINC00511-234ENST00000648297.11823No protein-
 
lncRNA
---
LINC00511-257ENST00000649311.11815No protein-
 
lncRNA
---
LINC00511-253ENST00000649172.11788No protein-
 
lncRNA
---
LINC00511-216ENST00000583460.21778No protein-
 
lncRNA
--GENCODE basicTSL:5
LINC00511-275ENST00000649833.11772No protein-
 
lncRNA
---
LINC00511-245ENST00000648667.11751No protein-
 
lncRNA
--GENCODE basic
LINC00511-273ENST00000649733.11742No protein-
 
lncRNA
---
LINC00511-205ENST00000578206.21732No protein-
 
lncRNA
--TSL:3
LINC00511-201ENST00000453722.61716No protein-
 
lncRNA
--TSL:2
LINC00511-227ENST00000648069.11713No protein-
 
lncRNA
--GENCODE basic
LINC00511-218ENST00000647593.11690No protein-
 
lncRNA
---
LINC00511-266ENST00000649489.11682No protein-
 
lncRNA
---
LINC00511-230ENST00000648176.21647No protein-
 
lncRNA
---
LINC00511-202ENST00000457958.71626No protein-
 
lncRNA
--TSL:1
LINC00511-236ENST00000648403.11556No protein-
 
lncRNA
--GENCODE basic
LINC00511-260ENST00000649343.11552No protein-
 
lncRNA
---
LINC00511-306ENST00000650602.21510No protein-
 
lncRNA
--GENCODE basic
LINC00511-233ENST00000648248.11468No protein-
 
lncRNA
---
LINC00511-296ENST00000650423.11455No protein-
 
lncRNA
---
LINC00511-241ENST00000648522.11351No protein-
 
lncRNA
---
LINC00511-281ENST00000650083.11329No protein-
 
lncRNA
---
LINC00511-229ENST00000648104.21264No protein-
 
lncRNA
---
LINC00511-270ENST00000649597.11206No protein-
 
lncRNA
---
LINC00511-298ENST00000650482.11202No protein-
 
lncRNA
---
LINC00511-265ENST00000649440.21159No protein-
 
lncRNA
---
LINC00511-290ENST00000650227.11126No protein-
 
lncRNA
---
LINC00511-271ENST00000649614.11098No protein-
 
lncRNA
---
LINC00511-267ENST00000649532.11045No protein-
 
lncRNA
---
LINC00511-263ENST00000649407.11045No protein-
 
lncRNA
---
LINC00511-226ENST00000648054.11027No protein-
 
lncRNA
---
LINC00511-288ENST00000650211.1977No protein-
 
lncRNA
---
LINC00511-286ENST00000650191.1951No protein-
 
lncRNA
---
LINC00511-254ENST00000649197.1937No protein-
 
lncRNA
--GENCODE basic
LINC00511-291ENST00000650289.2862No protein-
 
lncRNA
---
LINC00511-212ENST00000581183.3860No protein-
 
lncRNA
--TSL:3
LINC00511-295ENST00000650419.1853No protein-
 
lncRNA
---
LINC00511-246ENST00000648672.2841No protein-
 
lncRNA
---
LINC00511-297ENST00000650476.1826No protein-
 
lncRNA
---
LINC00511-268ENST00000649553.1819No protein-
 
lncRNA
---
LINC00511-277ENST00000649936.1796No protein-
 
lncRNA
---
LINC00511-284ENST00000650161.1791No protein-
 
lncRNA
---
LINC00511-256ENST00000649269.1789No protein-
 
lncRNA
---
LINC00511-238ENST00000648428.1780No protein-
 
lncRNA
---
LINC00511-219ENST00000647611.1762No protein-
 
lncRNA
---
LINC00511-287ENST00000650194.2762No protein-
 
lncRNA
---
LINC00511-214ENST00000581801.6749No protein-
 
lncRNA
--TSL:3
LINC00511-231ENST00000648203.1746No protein-
 
lncRNA
---
LINC00511-248ENST00000648907.1736No protein-
 
lncRNA
---
LINC00511-210ENST00000580861.2701No protein-
 
lncRNA
--GENCODE basicTSL:4
LINC00511-301ENST00000650510.1692No protein-
 
lncRNA
---
LINC00511-285ENST00000650180.1691No protein-
 
lncRNA
---
LINC00511-250ENST00000648954.1689No protein-
 
lncRNA
---
LINC00511-208ENST00000580199.7678No protein-
 
lncRNA
--TSL:3
LINC00511-228ENST00000648088.1669No protein-
 
lncRNA
---
LINC00511-232ENST00000648220.1668No protein-
 
lncRNA
---
LINC00511-204ENST00000577828.6656No protein-
 
lncRNA
--TSL:3
LINC00511-304ENST00000650570.1617No protein-
 
lncRNA
---
LINC00511-209ENST00000580500.5561No protein-
 
lncRNA
--TSL:4
LINC00511-203ENST00000577773.2532No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-303ENST00000650554.1514No protein-
 
lncRNA
---
LINC00511-259ENST00000649332.1509No protein-
 
lncRNA
---
LINC00511-247ENST00000648840.1502No protein-
 
lncRNA
---
LINC00511-222ENST00000647735.1496No protein-
 
lncRNA
--GENCODE basic
LINC00511-211ENST00000580948.1475No protein-
 
lncRNA
--TSL:3
LINC00511-269ENST00000649595.2471No protein-
 
lncRNA
---
LINC00511-206ENST00000579631.2448No protein-
 
lncRNA
--TSL:2
LINC00511-293ENST00000650357.1325No protein-
 
lncRNA
---
LINC00511-251ENST00000649013.1266No protein-
 
lncRNA
---
LINC00511-242ENST00000648559.1261No protein-
 
lncRNA
---
LINC00511-300ENST00000650499.1231No protein-
 
lncRNA
---
LINC00511-258ENST00000649330.1230No protein-
 
lncRNA
---
LINC00511-239ENST00000648500.1219No protein-
 
lncRNA
---
LINC00511-207ENST00000580175.2208No protein-
 
lncRNA
--TSL:3
LINC00511-217ENST00000584749.2173No protein-
 
lncRNA
--TSL:3
LINC00511-305ENST00000650600.1117No protein-
 
lncRNA
---
LINC00511-223ENST00000647850.1111No protein-
 
lncRNA
---
LINC00511-282ENST00000650121.1108No protein-
 
lncRNA
---
Statistics

Exons: 3, Coding exons: 0, Transcript length: 780 bps,

Version

ENST00000648428.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x252d5ea8)