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EnsemblEnsembl Home
Description

spermine oxidase [Source:MGI Symbol;Acc:MGI:2445356]

Gene Synonyms

B130066H01Rik, SMO

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Smox-204ENSMUST00000110181.82299385aaENSMUSP00000105810.2
 
Protein coding
CCDS50722Q3TLR8 GENCODE basicTSL:1
Smox-201ENSMUST00000028806.122270555aaENSMUSP00000028806.6
 
Protein coding
CCDS16763Q99K82-1 GENCODE basicAPPRIS P1TSL:1
Smox-207ENSMUST00000110186.92170585aaENSMUSP00000105815.3
 
Protein coding
CCDS50719Q99K82-2 GENCODE basicTSL:1
Smox-208ENSMUST00000110188.81991536aaENSMUSP00000105817.2
 
Protein coding
CCDS50720Q99K82-6 GENCODE basicTSL:1
Smox-209ENSMUST00000110189.91919512aaENSMUSP00000105818.3
 
Protein coding
CCDS50721Q99K82-7 GENCODE basicTSL:1
Smox-203ENSMUST00000110180.21617419aaENSMUSP00000105809.2
 
Protein coding
CCDS50718Q99K82-8 GENCODE basicTSL:1
Smox-202ENSMUST00000110179.91320243aaENSMUSP00000105808.3
 
Protein coding
CCDS50723A2ANQ4 GENCODE basicTSL:1
Smox-206ENSMUST00000110183.91159248aaENSMUSP00000105812.3
 
Protein coding
CCDS50724Q99K82-5 GENCODE basicTSL:1
Smox-205ENSMUST00000110182.9985190aaENSMUSP00000105811.3
 
Protein coding
CCDS50725Q99K82-10 GENCODE basicTSL:1
Smox-210ENSMUST00000129143.8768194aaENSMUSP00000120237.2
 
Protein coding
-A2ANQ3 TSL:3CDS 3' incomplete
Smox-211ENSMUST00000131698.241456aaENSMUSP00000114956.2
 
Protein coding
-A2AP08 TSL:2CDS 3' incomplete
Smox-217ENSMUST00000183947.81437209aaENSMUSP00000139278.2
 
Nonsense mediated decay
-Q99K82-4 TSL:1
Smox-215ENSMUST00000183575.878280aaENSMUSP00000139099.2
 
Nonsense mediated decay
-V9GXD6 TSL:3
Smox-216ENSMUST00000183881.247168aaENSMUSP00000139111.2
 
Nonsense mediated decay
-V9GXE5 TSL:3CDS 5' incomplete
Smox-212ENSMUST00000149180.2326No protein-
 
Processed transcript
--TSL:3
Smox-214ENSMUST00000151627.82223No protein-
 
Retained intron
--TSL:1
Smox-213ENSMUST00000151143.2720No protein-
 
Retained intron
--TSL:2
Description

VAMP associated protein A [Source:HGNC Symbol;Acc:HGNC:12648]

Gene Synonyms

VAP-A, hVAP-33

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VAPA-202ENST00000400000.76801249aaENSP00000382880.3
 
Protein coding
CCDS11848Q9P0L0-1 NM_194434.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VAPA-201ENST00000340541.41227294aaENSP00000345656.4
 
Protein coding
CCDS11847Q9P0L0-2 -GENCODE basicAPPRIS ALT1TSL:5
VAPA-209ENST00000585042.556729aaENSP00000463155.1
 
Nonsense mediated decay
-J3QKM9 -TSL:4
VAPA-208ENST00000584796.5654No protein-
 
Processed transcript
---TSL:3
VAPA-205ENST00000578314.1532No protein-
 
Processed transcript
---TSL:3
VAPA-203ENST00000577539.13760No protein-
 
Retained intron
---TSL:NA
VAPA-206ENST00000583475.1939No protein-
 
Retained intron
---TSL:2
VAPA-204ENST00000577901.5917No protein-
 
Retained intron
---TSL:2
VAPA-207ENST00000583879.5719No protein-
 
Retained intron
---TSL:2
Description

BTB (POZ) domain containing 19 [Source:MGI Symbol;Acc:MGI:1925861]

Gene Synonyms

9530048O09Rik

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Btbd19-209ENSMUST00000183310.21620287aaENSMUSP00000138230.2
 
Protein coding
-S4R1I0 GENCODE basicAPPRIS P1TSL:5
Btbd19-205ENSMUST00000153257.271057aaENSMUSP00000121768.3
 
Nonsense mediated decay
-A9JD57 TSL:3
Btbd19-204ENSMUST00000143213.959733aaENSMUSP00000138246.2
 
Nonsense mediated decay
-S4R1J4 TSL:3
Btbd19-207ENSMUST00000153924.81956No protein-
 
Processed transcript
--TSL:2
Btbd19-201ENSMUST00000097915.41152No protein-
 
Processed transcript
--TSL:1
Btbd19-203ENSMUST00000125896.9421No protein-
 
Processed transcript
--TSL:2
Btbd19-202ENSMUST00000123346.2345No protein-
 
Processed transcript
--TSL:2
Btbd19-208ENSMUST00000181979.21149No protein-
 
Retained intron
--TSL:NA
Btbd19-206ENSMUST00000153303.2451No protein-
 
Retained intron
--TSL:2
Description

VPS53 subunit of GARP complex [Source:HGNC Symbol;Acc:HGNC:25608]

Gene Synonyms

FLJ10979, HCCS1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VPS53-204ENST00000437048.713089832aaENSP00000401435.2
 
Protein coding
CCDS45558Q5VIR6-4 NM_001128159.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VPS53-201ENST00000291074.102695670aaENSP00000291074.5
 
Protein coding
CCDS10995Q5VIR6-2 -GENCODE basicTSL:1
VPS53-251ENST00000681160.113499709aaENSP00000504905.1
 
Protein coding
---GENCODE basic
VPS53-243ENST00000680970.13813106aaENSP00000505263.1
 
Protein coding
---GENCODE basic
VPS53-217ENST00000575100.23402133aaENSP00000505967.1
 
Protein coding
---GENCODE basicTSL:NA
VPS53-211ENST00000571805.63070699aaENSP00000459312.1
 
Protein coding
-Q5VIR6-1 -GENCODE basicAPPRIS ALT2TSL:1
VPS53-219ENST00000576019.62939203aaENSP00000461429.2
 
Protein coding
-I3L4P9 -GENCODE basicTSL:3
VPS53-233ENST00000680241.12882166aaENSP00000505475.1
 
Protein coding
---GENCODE basic
VPS53-260ENST00000681510.12856782aaENSP00000505594.1
 
Protein coding
---GENCODE basic
VPS53-230ENST00000680069.12729672aaENSP00000505145.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VPS53-232ENST00000680128.12716631aaENSP00000506159.1
 
Protein coding
---GENCODE basic
VPS53-246ENST00000681096.12694546aaENSP00000506052.1
 
Protein coding
---GENCODE basic
VPS53-216ENST00000574029.6269081aaENSP00000459159.2
 
Protein coding
-I3L1W6 -GENCODE basicTSL:4
VPS53-256ENST00000681317.12671680aaENSP00000505190.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VPS53-249ENST00000681133.12269422aaENSP00000506475.1
 
Protein coding
---GENCODE basic
VPS53-270ENST00000681917.12241655aaENSP00000505944.1
 
Protein coding
---GENCODE basic
VPS53-221ENST00000679361.12237673aaENSP00000504978.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VPS53-250ENST00000681154.12161644aaENSP00000505866.1
 
Protein coding
---GENCODE basic
VPS53-224ENST00000679680.12155372aaENSP00000506269.1
 
Protein coding
---GENCODE basic
VPS53-269ENST00000681902.12149643aaENSP00000505328.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VPS53-239ENST00000680704.12125572aaENSP00000506453.1
 
Protein coding
---CDS 3' incomplete
VPS53-213ENST00000572334.71961572aaENSP00000506188.1
 
Protein coding
---TSL:5CDS 3' incomplete
VPS53-228ENST00000679961.11619135aaENSP00000505902.1
 
Protein coding
---GENCODE basic
VPS53-248ENST00000681120.1149980aaENSP00000506067.1
 
Protein coding
---GENCODE basic
VPS53-231ENST00000680114.11392464aaENSP00000505327.1
 
Protein coding
---CDS 5' and 3' incomplete
VPS53-226ENST00000679865.1138778aaENSP00000504898.1
 
Protein coding
---GENCODE basic
VPS53-210ENST00000571456.2136983aaENSP00000506589.1
 
Protein coding
---GENCODE basicTSL:3
VPS53-203ENST00000401468.71269422aaENSP00000384294.3
 
Protein coding
-E7EVT8 -GENCODE basicTSL:1
VPS53-255ENST00000681295.11264104aaENSP00000506514.1
 
Protein coding
---GENCODE basic
VPS53-208ENST00000570650.21050342aaENSP00000458651.2
 
Protein coding
-I3L184 -TSL:2CDS 5' incomplete
VPS53-266ENST00000681858.11012233aaENSP00000505044.1
 
Protein coding
---GENCODE basic
VPS53-247ENST00000681103.1926242aaENSP00000505892.1
 
Protein coding
---GENCODE basic
VPS53-225ENST00000679817.1589109aaENSP00000505032.1
 
Protein coding
---GENCODE basic
VPS53-235ENST00000680465.13235832aaENSP00000505997.1
 
Nonsense mediated decay
CCDS45558---
VPS53-264ENST00000681661.16682337aaENSP00000506596.1
 
Nonsense mediated decay
----
VPS53-240ENST00000680872.15413216aaENSP00000506605.1
 
Nonsense mediated decay
----
VPS53-236ENST00000680641.14536119aaENSP00000505237.1
 
Nonsense mediated decay
----
VPS53-215ENST00000573028.53204216aaENSP00000458311.1
 
Nonsense mediated decay
-I3L0S6 -TSL:2
VPS53-259ENST00000681478.13157119aaENSP00000505041.1
 
Nonsense mediated decay
----
VPS53-272ENST00000681946.12973337aaENSP00000505563.1
 
Nonsense mediated decay
----
VPS53-271ENST00000681943.12546253aaENSP00000504889.1
 
Nonsense mediated decay
---CDS 5' incomplete
VPS53-220ENST00000576149.5244451aaENSP00000505114.1
 
Nonsense mediated decay
---TSL:5
VPS53-212ENST00000572259.21925109aaENSP00000505287.1
 
Nonsense mediated decay
---TSL:3
VPS53-202ENST00000389040.91903547aaENSP00000373692.5
 
Nonsense mediated decay
-F6VX93 -TSL:1
VPS53-245ENST00000681050.11520237aaENSP00000506640.1
 
Nonsense mediated decay
---CDS 5' incomplete
VPS53-265ENST00000681830.1141597aaENSP00000505322.1
 
Nonsense mediated decay
---CDS 5' incomplete
VPS53-227ENST00000679959.11399293aaENSP00000506180.1
 
Nonsense mediated decay
---CDS 5' incomplete
VPS53-218ENST00000575207.61356133aaENSP00000504867.1
 
Nonsense mediated decay
---TSL:4
VPS53-254ENST00000681229.11261136aaENSP00000505837.1
 
Nonsense mediated decay
----
VPS53-257ENST00000681423.11057117aaENSP00000505115.1
 
Nonsense mediated decay
----
VPS53-267ENST00000681866.13892No protein-
 
Processed transcript
----
VPS53-253ENST00000681217.13785No protein-
 
Processed transcript
----
VPS53-222ENST00000679447.13546No protein-
 
Processed transcript
----
VPS53-242ENST00000680958.11872No protein-
 
Processed transcript
----
VPS53-262ENST00000681578.11870No protein-
 
Processed transcript
----
VPS53-237ENST00000680660.11563No protein-
 
Processed transcript
----
VPS53-261ENST00000681570.11370No protein-
 
Processed transcript
----
VPS53-214ENST00000572607.2890No protein-
 
Processed transcript
---TSL:3
VPS53-229ENST00000679978.1816No protein-
 
Processed transcript
----
VPS53-207ENST00000570510.6570No protein-
 
Processed transcript
---TSL:4
VPS53-223ENST00000679468.1559No protein-
 
Processed transcript
----
VPS53-252ENST00000681205.1506No protein-
 
Processed transcript
----
VPS53-205ENST00000541903.7490No protein-
 
Processed transcript
---TSL:1
VPS53-241ENST00000680944.16890No protein-
 
Retained intron
----
VPS53-206ENST00000570359.12781No protein-
 
Retained intron
---TSL:NA
VPS53-244ENST00000681035.12691No protein-
 
Retained intron
----
VPS53-268ENST00000681897.12644No protein-
 
Retained intron
----
VPS53-238ENST00000680702.12403No protein-
 
Retained intron
----
VPS53-234ENST00000680274.11967No protein-
 
Retained intron
----
VPS53-263ENST00000681600.11782No protein-
 
Retained intron
----
VPS53-258ENST00000681442.1957No protein-
 
Retained intron
----
VPS53-209ENST00000570771.1366No protein-
 
Retained intron
---TSL:3
Description

sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]

Gene Synonyms

DYT11

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SGCE-298ENST00000648936.21868437aaENSP00000497130.1
 
Protein coding
CCDS5637O43556-1 NM_003919.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4
SGCE-281ENST00000646489.11733473aaENSP00000496268.1
 
Protein coding
CCDS87523A0A2R8YGQ3 -GENCODE basicAPPRIS ALT1
SGCE-205ENST00000445866.71704462aaENSP00000398930.2
 
Protein coding
CCDS47643O43556-4 -GENCODE basicTSL:5
SGCE-231ENST00000643272.11677464aaENSP00000494488.1
 
Protein coding
CCDS87522A0A2R8Y5J3 -GENCODE basic
SGCE-206ENST00000447873.61672428aaENSP00000388734.1
 
Protein coding
CCDS87520C9JR67 -GENCODE basicTSL:1
SGCE-224ENST00000642933.11634451aaENSP00000496237.1
 
Protein coding
CCDS47642O43556-3 -GENCODE basic
SGCE-204ENST00000437425.71532396aaENSP00000394061.2
 
Protein coding
CCDS75634E9PEH6 -GENCODE basicTSL:2
SGCE-214ENST00000642394.11399387aaENSP00000493751.1
 
Protein coding
CCDS87519A0A2R8Y448 -GENCODE basic
SGCE-286ENST00000646879.13474426aaENSP00000495209.1
 
Protein coding
-A0A2R8Y628 -GENCODE basic
SGCE-262ENST00000645109.12949454aaENSP00000495931.1
 
Protein coding
-A0A2R8Y4E3 -GENCODE basic
SGCE-229ENST00000643193.12575458aaENSP00000496559.1
 
Protein coding
-A0A2R8YH84 -GENCODE basic
SGCE-201ENST00000415788.31979471aaENSP00000405313.2
 
Protein coding
-B7Z2R4 -GENCODE basicTSL:2
SGCE-295ENST00000647351.11977487aaENSP00000494556.1
 
Protein coding
-A0A2R8Y5M2 -GENCODE basic
SGCE-244ENST00000644122.11779482aaENSP00000495236.1
 
Protein coding
-A0A2R8Y638 -GENCODE basic
SGCE-261ENST00000645101.11739491aaENSP00000494975.1
 
Protein coding
-A0A2R8YFA5 -GENCODE basic
SGCE-257ENST00000644816.11733460aaENSP00000494898.1
 
Protein coding
-A0A2R8Y5X5 -GENCODE basicAPPRIS ALT1
SGCE-248ENST00000644375.11715473aaENSP00000494315.1
 
Protein coding
-A0A2R8YD68 -GENCODE basic
SGCE-250ENST00000644551.11713464aaENSP00000493981.1
 
Protein coding
-A0A2R8Y4P8 -GENCODE basic
SGCE-219ENST00000642707.11713489aaENSP00000495270.1
 
Protein coding
-A0A2R8YE48 -GENCODE basic
SGCE-255ENST00000644681.11701360aaENSP00000496455.1
 
Protein coding
-A0A2R8Y7Q5 -GENCODE basic
SGCE-227ENST00000643128.11692418aaENSP00000496678.1
 
Protein coding
-A0A2R8Y821 -GENCODE basic
SGCE-288ENST00000646943.11667485aaENSP00000494666.1
 
Protein coding
-A0A2R8Y5R7 -GENCODE basic
SGCE-276ENST00000646137.11656446aaENSP00000495199.1
 
Protein coding
-A0A2R8Y621 -GENCODE basic
SGCE-270ENST00000645725.11652455aaENSP00000495480.1
 
Protein coding
-A0A2R8Y6U6 -GENCODE basic
SGCE-240ENST00000643903.11637409aaENSP00000495165.1
 
Protein coding
-A0A2R8YE16 -GENCODE basic
SGCE-266ENST00000645535.11613360aaENSP00000493984.1
 
Protein coding
-A0A2R8Y7Q5 -GENCODE basic
SGCE-292ENST00000647096.11610500aaENSP00000494192.1
 
Protein coding
-A0A2R8Y504 -GENCODE basic
SGCE-215ENST00000642441.11592478aaENSP00000495994.1
 
Protein coding
-A0A2R8YEY2 -GENCODE basic
SGCE-251ENST00000644609.11586450aaENSP00000496045.1
 
Protein coding
-A0A2R8Y7J1 -GENCODE basic
SGCE-243ENST00000644116.11577476aaENSP00000495276.1
 
Protein coding
-A0A2R8Y652 -GENCODE basic
SGCE-274ENST00000646098.11566429aaENSP00000495591.1
 
Protein coding
-A0A2R8Y6V3 -GENCODE basic
SGCE-277ENST00000646265.11564481aaENSP00000494587.1
 
Protein coding
-A0A2R8Y5J6 -CDS 5' incomplete
SGCE-294ENST00000647334.11554482aaENSP00000495114.1
 
Protein coding
-A0A2R8Y5X0 -CDS 5' incomplete
SGCE-293ENST00000647110.11533453aaENSP00000494738.1
 
Protein coding
-A0A2R8Y5Q3 -CDS 5' incomplete
SGCE-289ENST00000647018.11532454aaENSP00000493722.1
 
Protein coding
-A0A2R8Y4E3 -GENCODE basic
SGCE-275ENST00000646119.11493447aaENSP00000494615.1
 
Protein coding
-A0A2R8Y5P8 -CDS 5' incomplete
SGCE-256ENST00000644682.11492450aaENSP00000493509.1
 
Protein coding
-A0A2R8Y2R1 -CDS 5' incomplete
SGCE-265ENST00000645445.11475420aaENSP00000493603.1
 
Protein coding
-A0A2R8Y416 -CDS 5' incomplete
SGCE-263ENST00000645262.11417410aaENSP00000494164.1
 
Protein coding
-A0A2R8YE99 -GENCODE basic
SGCE-203ENST00000428696.71368444aaENSP00000397536.3
 
Protein coding
-A0A2U3TZN7 -GENCODE basicTSL:1
SGCE-291ENST00000647048.11284388aaENSP00000495468.1
 
Protein coding
-A0A2R8Y6D4 -CDS 5' incomplete
SGCE-225ENST00000643020.11204402aaENSP00000494457.1
 
Protein coding
-A0A2R8Y5H7 -CDS 5' and 3' incomplete
SGCE-228ENST00000643160.1927197aaENSP00000493950.1
 
Protein coding
-A0A2R8YCT2 -CDS 5' incomplete
SGCE-210ENST00000522045.540841aaENSP00000431080.1
 
Protein coding
-H0YC75 -TSL:3CDS 5' incomplete
SGCE-272ENST00000645804.138638aaENSP00000494688.1
 
Protein coding
-A0A2R8YDK8 -CDS 5' incomplete
SGCE-202ENST00000425444.2197943aaENSP00000391892.1
 
Nonsense mediated decay
-A0A2R8Y6I4 -TSL:3
SGCE-237ENST00000643605.1176062aaENSP00000496480.1
 
Nonsense mediated decay
-A0A2R8YH48 --
SGCE-279ENST00000646434.1175543aaENSP00000496613.1
 
Nonsense mediated decay
-A0A2R8Y831 -CDS 5' incomplete
SGCE-238ENST00000643610.11745454aaENSP00000494350.1
 
Nonsense mediated decay
-A0A2R8Y4X1 --
SGCE-280ENST00000646466.1172443aaENSP00000493511.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-242ENST00000644087.1169743aaENSP00000495249.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-252ENST00000644639.11696161aaENSP00000496391.1
 
Nonsense mediated decay
-A0A2R8Y7M6 --
SGCE-282ENST00000646559.1168643aaENSP00000495838.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-283ENST00000646600.1167043aaENSP00000494041.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-218ENST00000642638.1164643aaENSP00000495555.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-226ENST00000643041.11601370aaENSP00000495311.1
 
Nonsense mediated decay
-A0A2R8Y6G8 --
SGCE-241ENST00000643991.1143682aaENSP00000494489.1
 
Nonsense mediated decay
-A0A2R8Y5F3 -CDS 5' incomplete
SGCE-212ENST00000642291.11382324aaENSP00000495656.1
 
Nonsense mediated decay
-A0A2R8Y6Y5 -CDS 5' incomplete
SGCE-278ENST00000646301.1136014aaENSP00000495603.1
 
Nonsense mediated decay
-A0A2R8Y6Z8 -CDS 5' incomplete
SGCE-230ENST00000643206.1135945aaENSP00000496172.1
 
Nonsense mediated decay
-A0A2R8YGV6 --
SGCE-236ENST00000643568.11323309aaENSP00000495735.1
 
Nonsense mediated decay
-A0A2R8Y6S4 -CDS 5' incomplete
SGCE-284ENST00000646682.199843aaENSP00000496461.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-253ENST00000644658.1891161aaENSP00000494540.1
 
Nonsense mediated decay
-A0A2R8Y5L4 -CDS 5' incomplete
SGCE-259ENST00000644966.1872105aaENSP00000495105.1
 
Nonsense mediated decay
-A0A2R8YDZ5 -CDS 5' incomplete
SGCE-245ENST00000644201.1837173aaENSP00000495044.1
 
Nonsense mediated decay
-A0A2R8Y696 -CDS 5' incomplete
SGCE-273ENST00000645920.180443aaENSP00000494490.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-207ENST00000450385.669060aaENSP00000398344.2
 
Nonsense mediated decay
-C9J4J9 -TSL:3
SGCE-211ENST00000642169.166145aaENSP00000496346.1
 
Nonsense mediated decay
-A0A2R8YGV6 --
SGCE-254ENST00000644674.11369No protein-
 
Processed transcript
----
SGCE-268ENST00000645624.1903No protein-
 
Processed transcript
----
SGCE-296ENST00000647379.1815No protein-
 
Processed transcript
----
SGCE-234ENST00000643368.1519No protein-
 
Processed transcript
----
SGCE-258ENST00000644924.1395No protein-
 
Processed transcript
----
SGCE-220ENST00000642754.16270No protein-
 
Retained intron
----
SGCE-290ENST00000647031.14072No protein-
 
Retained intron
----
SGCE-297ENST00000647533.13082No protein-
 
Retained intron
----
SGCE-264ENST00000645390.12607No protein-
 
Retained intron
----
SGCE-287ENST00000646910.12473No protein-
 
Retained intron
----
SGCE-232ENST00000643324.12420No protein-
 
Retained intron
----
SGCE-239ENST00000643714.12390No protein-
 
Retained intron
----
SGCE-235ENST00000643491.12361No protein-
 
Retained intron
----
SGCE-249ENST00000644533.12356No protein-
 
Retained intron
----
SGCE-260ENST00000645027.12353No protein-
 
Retained intron
----
SGCE-247ENST00000644373.12332No protein-
 
Retained intron
----
SGCE-216ENST00000642497.12325No protein-
 
Retained intron
----
SGCE-267ENST00000645579.12292No protein-
 
Retained intron
----
SGCE-246ENST00000644268.12036No protein-
 
Retained intron
----
SGCE-223ENST00000642904.11895No protein-
 
Retained intron
----
SGCE-221ENST00000642759.11830No protein-
 
Retained intron
----
SGCE-213ENST00000642353.11781No protein-
 
Retained intron
----
SGCE-233ENST00000643358.11722No protein-
 
Retained intron
----
SGCE-271ENST00000645767.11538No protein-
 
Retained intron
----
SGCE-285ENST00000646761.11477No protein-
 
Retained intron
----
SGCE-217ENST00000642564.11462No protein-
 
Retained intron
----
SGCE-222ENST00000642802.11359No protein-
 
Retained intron
----
SGCE-269ENST00000645665.1805No protein-
 
Retained intron
----
SGCE-209ENST00000472326.2453No protein-
 
Retained intron
---TSL:2
SGCE-208ENST00000462731.2418No protein-
 
Retained intron
---TSL:2
Description

long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]

Gene Synonyms

onco-lncRNA-12

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
LINC00511-279ENST00000650033.13766No protein-
 
Retained intron
---
LINC00511-278ENST00000650016.1508No protein-
 
Retained intron
---
LINC00511-244ENST00000648631.12929No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
LINC00511-220ENST00000647652.13700No protein-
 
lncRNA
--GENCODE basic
LINC00511-215ENST00000582712.22586No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-221ENST00000647706.22532No protein-
 
lncRNA
---
LINC00511-261ENST00000649350.12527No protein-
 
lncRNA
---
LINC00511-243ENST00000648623.22522No protein-
 
lncRNA
---
LINC00511-225ENST00000647953.12292No protein-
 
lncRNA
--GENCODE basic
LINC00511-283ENST00000650131.22282No protein-
 
lncRNA
---
LINC00511-213ENST00000581549.22266No protein-
 
lncRNA
--GENCODE basicTSL:2
LINC00511-235ENST00000648401.12214No protein-
 
lncRNA
--GENCODE basic
LINC00511-274ENST00000649793.22208No protein-
 
lncRNA
---
LINC00511-280ENST00000650051.12207No protein-
 
lncRNA
---
LINC00511-289ENST00000650212.12174No protein-
 
lncRNA
--GENCODE basic
LINC00511-276ENST00000649881.12078No protein-
 
lncRNA
---
LINC00511-294ENST00000650371.12061No protein-
 
lncRNA
---
LINC00511-272ENST00000649647.12060No protein-
 
lncRNA
---
LINC00511-302ENST00000650550.22041No protein-
 
lncRNA
--GENCODE basic
LINC00511-262ENST00000649366.12028No protein-
 
lncRNA
---
LINC00511-292ENST00000650313.11995No protein-
 
lncRNA
--GENCODE basic
LINC00511-255ENST00000649250.11978No protein-
 
lncRNA
---
LINC00511-224ENST00000647871.21958No protein-
 
lncRNA
--GENCODE basic
LINC00511-252ENST00000649074.11905No protein-
 
lncRNA
--GENCODE basic
LINC00511-249ENST00000648952.11893No protein-
 
lncRNA
---
LINC00511-299ENST00000650483.11888No protein-
 
lncRNA
---
LINC00511-240ENST00000648520.11888No protein-
 
lncRNA
--GENCODE basic
LINC00511-237ENST00000648411.11843No protein-
 
lncRNA
--GENCODE basic
LINC00511-264ENST00000649433.11836No protein-
 
lncRNA
--GENCODE basic
LINC00511-234ENST00000648297.11823No protein-
 
lncRNA
---
LINC00511-257ENST00000649311.11815No protein-
 
lncRNA
---
LINC00511-253ENST00000649172.11788No protein-
 
lncRNA
---
LINC00511-216ENST00000583460.21778No protein-
 
lncRNA
--GENCODE basicTSL:5
LINC00511-275ENST00000649833.11772No protein-
 
lncRNA
---
LINC00511-245ENST00000648667.11751No protein-
 
lncRNA
--GENCODE basic
LINC00511-273ENST00000649733.11742No protein-
 
lncRNA
---
LINC00511-205ENST00000578206.21732No protein-
 
lncRNA
--TSL:3
LINC00511-201ENST00000453722.61716No protein-
 
lncRNA
--TSL:2
LINC00511-227ENST00000648069.11713No protein-
 
lncRNA
--GENCODE basic
LINC00511-218ENST00000647593.11690No protein-
 
lncRNA
---
LINC00511-266ENST00000649489.11682No protein-
 
lncRNA
---
LINC00511-230ENST00000648176.21647No protein-
 
lncRNA
---
LINC00511-202ENST00000457958.71626No protein-
 
lncRNA
--TSL:1
LINC00511-236ENST00000648403.11556No protein-
 
lncRNA
--GENCODE basic
LINC00511-260ENST00000649343.11552No protein-
 
lncRNA
---
LINC00511-306ENST00000650602.21510No protein-
 
lncRNA
--GENCODE basic
LINC00511-233ENST00000648248.11468No protein-
 
lncRNA
---
LINC00511-296ENST00000650423.11455No protein-
 
lncRNA
---
LINC00511-241ENST00000648522.11351No protein-
 
lncRNA
---
LINC00511-281ENST00000650083.11329No protein-
 
lncRNA
---
LINC00511-229ENST00000648104.21264No protein-
 
lncRNA
---
LINC00511-270ENST00000649597.11206No protein-
 
lncRNA
---
LINC00511-298ENST00000650482.11202No protein-
 
lncRNA
---
LINC00511-265ENST00000649440.21159No protein-
 
lncRNA
---
LINC00511-290ENST00000650227.11126No protein-
 
lncRNA
---
LINC00511-271ENST00000649614.11098No protein-
 
lncRNA
---
LINC00511-267ENST00000649532.11045No protein-
 
lncRNA
---
LINC00511-263ENST00000649407.11045No protein-
 
lncRNA
---
LINC00511-226ENST00000648054.11027No protein-
 
lncRNA
---
LINC00511-288ENST00000650211.1977No protein-
 
lncRNA
---
LINC00511-286ENST00000650191.1951No protein-
 
lncRNA
---
LINC00511-254ENST00000649197.1937No protein-
 
lncRNA
--GENCODE basic
LINC00511-291ENST00000650289.2862No protein-
 
lncRNA
---
LINC00511-212ENST00000581183.3860No protein-
 
lncRNA
--TSL:3
LINC00511-295ENST00000650419.1853No protein-
 
lncRNA
---
LINC00511-246ENST00000648672.2841No protein-
 
lncRNA
---
LINC00511-297ENST00000650476.1826No protein-
 
lncRNA
---
LINC00511-268ENST00000649553.1819No protein-
 
lncRNA
---
LINC00511-277ENST00000649936.1796No protein-
 
lncRNA
---
LINC00511-284ENST00000650161.1791No protein-
 
lncRNA
---
LINC00511-256ENST00000649269.1789No protein-
 
lncRNA
---
LINC00511-238ENST00000648428.1780No protein-
 
lncRNA
---
LINC00511-219ENST00000647611.1762No protein-
 
lncRNA
---
LINC00511-287ENST00000650194.2762No protein-
 
lncRNA
---
LINC00511-214ENST00000581801.6749No protein-
 
lncRNA
--TSL:3
LINC00511-231ENST00000648203.1746No protein-
 
lncRNA
---
LINC00511-248ENST00000648907.1736No protein-
 
lncRNA
---
LINC00511-210ENST00000580861.2701No protein-
 
lncRNA
--GENCODE basicTSL:4
LINC00511-301ENST00000650510.1692No protein-
 
lncRNA
---
LINC00511-285ENST00000650180.1691No protein-
 
lncRNA
---
LINC00511-250ENST00000648954.1689No protein-
 
lncRNA
---
LINC00511-208ENST00000580199.7678No protein-
 
lncRNA
--TSL:3
LINC00511-228ENST00000648088.1669No protein-
 
lncRNA
---
LINC00511-232ENST00000648220.1668No protein-
 
lncRNA
---
LINC00511-204ENST00000577828.6656No protein-
 
lncRNA
--TSL:3
LINC00511-304ENST00000650570.1617No protein-
 
lncRNA
---
LINC00511-209ENST00000580500.5561No protein-
 
lncRNA
--TSL:4
LINC00511-203ENST00000577773.2532No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-303ENST00000650554.1514No protein-
 
lncRNA
---
LINC00511-259ENST00000649332.1509No protein-
 
lncRNA
---
LINC00511-247ENST00000648840.1502No protein-
 
lncRNA
---
LINC00511-222ENST00000647735.1496No protein-
 
lncRNA
--GENCODE basic
LINC00511-211ENST00000580948.1475No protein-
 
lncRNA
--TSL:3
LINC00511-269ENST00000649595.2471No protein-
 
lncRNA
---
LINC00511-206ENST00000579631.2448No protein-
 
lncRNA
--TSL:2
LINC00511-293ENST00000650357.1325No protein-
 
lncRNA
---
LINC00511-251ENST00000649013.1266No protein-
 
lncRNA
---
LINC00511-242ENST00000648559.1261No protein-
 
lncRNA
---
LINC00511-300ENST00000650499.1231No protein-
 
lncRNA
---
LINC00511-258ENST00000649330.1230No protein-
 
lncRNA
---
LINC00511-239ENST00000648500.1219No protein-
 
lncRNA
---
LINC00511-207ENST00000580175.2208No protein-
 
lncRNA
--TSL:3
LINC00511-217ENST00000584749.2173No protein-
 
lncRNA
--TSL:3
LINC00511-305ENST00000650600.1117No protein-
 
lncRNA
---
LINC00511-223ENST00000647850.1111No protein-
 
lncRNA
---
LINC00511-282ENST00000650121.1108No protein-
 
lncRNA
---
Statistics

Exons: 7, Coding exons: 0, Transcript length: 937 bps,

Version

ENST00000649197.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x24e71cf8)