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EnsemblEnsembl Home
Description

RAB, member RAS oncogene family-like 6 [Source:MGI Symbol;Acc:MGI:2442633]

Gene Synonyms

B230208H17Rik, Rbel1, Rbel1a, Rbel1b

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Rabl6-201ENSMUST00000058137.93230725aaENSMUSP00000058746.9
 
Protein coding
CCDS38076Q5U3K5 GENCODE basicAPPRIS P1TSL:1
Rabl6-209ENSMUST00000150206.83908No protein-
 
Processed transcript
--TSL:1
Rabl6-208ENSMUST00000146012.82190No protein-
 
Processed transcript
--TSL:1
Rabl6-204ENSMUST00000140635.81165No protein-
 
Processed transcript
--TSL:5
Rabl6-205ENSMUST00000140778.2734No protein-
 
Processed transcript
--TSL:5
Rabl6-206ENSMUST00000140785.2612No protein-
 
Processed transcript
--TSL:3
Rabl6-207ENSMUST00000143855.2600No protein-
 
Processed transcript
--TSL:3
Rabl6-203ENSMUST00000135084.2548No protein-
 
Processed transcript
--TSL:2
Rabl6-202ENSMUST00000128942.2312No protein-
 
Processed transcript
--TSL:2
Description

SS18 subunit of BAF chromatin remodeling complex [Source:HGNC Symbol;Acc:HGNC:11340]

Gene Synonyms

SSXT, SYT

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SS18-203ENST00000415083.73402418aaENSP00000414516.2
 
Protein coding
CCDS32807Q15532-1 NM_001007559.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
SS18-205ENST00000542420.62321395aaENSP00000438066.2
 
Protein coding
CCDS77168B4DLD3 -GENCODE basicTSL:2
SS18-201ENST00000269137.111836387aaENSP00000269137.7
 
Protein coding
CCDS54183Q15532-2 -GENCODE basicAPPRIS ALT1TSL:1
SS18-224ENST00000584083.5663130aaENSP00000463943.1
 
Protein coding
-J3QQX5 -TSL:4CDS 3' incomplete
SS18-212ENST00000579061.5646152aaENSP00000462766.1
 
Protein coding
-J3KT22 -TSL:3CDS 3' incomplete
SS18-218ENST00000581021.558870aaENSP00000463586.1
 
Protein coding
-J3QLJ7 -TSL:4CDS 3' incomplete
SS18-213ENST00000579640.5184058aaENSP00000462363.1
 
Nonsense mediated decay
-J3KRP6 -TSL:2
SS18-202ENST00000269138.9154861aaENSP00000269138.5
 
Nonsense mediated decay
-X6R3J2 -TSL:2
SS18-225ENST00000585121.5154584aaENSP00000462838.1
 
Nonsense mediated decay
-J3KT74 -TSL:2
SS18-204ENST00000539244.697741aaENSP00000441760.2
 
Nonsense mediated decay
-F5GWN1 -TSL:1
SS18-211ENST00000578954.575660aaENSP00000464664.1
 
Nonsense mediated decay
-J3QS72 -TSL:3
SS18-221ENST00000582448.558535aaENSP00000464609.1
 
Nonsense mediated decay
-J3QSB3 -TSL:5
SS18-207ENST00000577636.558055aaENSP00000463933.1
 
Nonsense mediated decay
-J3QQW6 -TSL:3
SS18-210ENST00000578700.557545aaENSP00000464673.1
 
Nonsense mediated decay
-J3QSG1 -TSL:5
SS18-219ENST00000581570.557160aaENSP00000464556.1
 
Nonsense mediated decay
-J3QS72 -TSL:5
SS18-216ENST00000580751.554760aaENSP00000464049.1
 
Nonsense mediated decay
-J3QS72 -TSL:4
SS18-215ENST00000580642.254558aaENSP00000462104.1
 
Nonsense mediated decay
-J3KRP6 -TSL:4
SS18-222ENST00000582792.553194aaENSP00000463928.1
 
Nonsense mediated decay
-J3QQW2 -TSL:5
SS18-206ENST00000577572.551068aaENSP00000463802.1
 
Nonsense mediated decay
-J3QQM2 -TSL:4
SS18-226ENST00000585241.5774No protein-
 
Processed transcript
---TSL:5
SS18-208ENST00000577751.5580No protein-
 
Processed transcript
---TSL:4
SS18-209ENST00000578595.1406No protein-
 
Processed transcript
---TSL:3
SS18-223ENST00000583595.1375No protein-
 
Processed transcript
---TSL:3
SS18-220ENST00000582092.1215No protein-
 
Processed transcript
---TSL:1
SS18-217ENST00000580958.5775No protein-
 
Retained intron
---TSL:2
SS18-214ENST00000580003.1609No protein-
 
Retained intron
---TSL:2
Description

transmembrane protein 260 [Source:HGNC Symbol;Acc:HGNC:20185]

Gene Synonyms

C14orf101, FLJ20392

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
TMEM260-201ENST00000261556.114259707aaENSP00000261556.6
 
Protein coding
CCDS9727Q9NX78-1 NM_017799.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:2
TMEM260-202ENST00000538838.51638409aaENSP00000441934.1
 
Protein coding
-Q9NX78-3 -GENCODE basicAPPRIS ALT2TSL:1
TMEM260-212ENST00000556810.566274aaENSP00000451677.1
 
Protein coding
-G3V4A2 -TSL:3CDS 3' incomplete
TMEM260-206ENST00000555046.161841aaENSP00000451695.1
 
Protein coding
-H0YJK2 -TSL:3CDS 5' incomplete
TMEM260-210ENST00000556422.53864253aaENSP00000450988.1
 
Nonsense mediated decay
-G3V320 -TSL:1
TMEM260-203ENST00000539559.62680324aaENSP00000442602.2
 
Nonsense mediated decay
-F5H7D0 -TSL:1
TMEM260-207ENST00000555497.52218115aaENSP00000452065.1
 
Nonsense mediated decay
-G3V4Y3 -TSL:2
TMEM260-208ENST00000555905.5766101aaENSP00000452441.1
 
Nonsense mediated decay
-H0YJX9 -TSL:5CDS 5' incomplete
TMEM260-213ENST00000556929.554720aaENSP00000452579.1
 
Nonsense mediated decay
-H0YK00 -TSL:4CDS 5' incomplete
TMEM260-204ENST00000553335.5560No protein-
 
Processed transcript
---TSL:3
TMEM260-214ENST00000556975.5543No protein-
 
Processed transcript
---TSL:4
TMEM260-216ENST00000557657.52572No protein-
 
Retained intron
---TSL:1
TMEM260-211ENST00000556648.12013No protein-
 
Retained intron
---TSL:2
TMEM260-215ENST00000557626.51262No protein-
 
Retained intron
---TSL:1
TMEM260-209ENST00000556079.1596No protein-
 
Retained intron
---TSL:2
TMEM260-205ENST00000554981.1549No protein-
 
Retained intron
---TSL:4
Description

TANK binding kinase 1 [Source:HGNC Symbol;Acc:HGNC:11584]

Gene Synonyms

NAK

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
TBK1-201ENST00000331710.103022729aaENSP00000329967.5
 
Protein coding
CCDS8968Q9UHD2 NM_013254.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
TBK1-212ENST00000650790.13006729aaENSP00000498995.1
 
Protein coding
CCDS8968Q9UHD2 -GENCODE basicAPPRIS P2
TBK1-214ENST00000651014.13046677aaENSP00000498885.1
 
Protein coding
-A0A494C167 -GENCODE basic
TBK1-246ENST00000677641.13001728aaENSP00000504637.1
 
Protein coding
---GENCODE basicAPPRIS ALT1
TBK1-245ENST00000677632.12959724aaENSP00000504586.1
 
Protein coding
---GENCODE basic
TBK1-234ENST00000676912.12956677aaENSP00000503567.1
 
Protein coding
---GENCODE basic
TBK1-221ENST00000652657.12944705aaENSP00000498887.1
 
Protein coding
-A0A494C148 -GENCODE basic
TBK1-256ENST00000678180.12869695aaENSP00000504132.1
 
Protein coding
---GENCODE basic
TBK1-235ENST00000676930.12649613aaENSP00000502899.1
 
Protein coding
---GENCODE basic
TBK1-210ENST00000650762.12459643aaENSP00000498758.1
 
Protein coding
-A0A494C0X2 -GENCODE basic
TBK1-228ENST00000676593.187743aaENSP00000503458.1
 
Protein coding
---CDS 5' incomplete
TBK1-227ENST00000676587.186440aaENSP00000504858.1
 
Protein coding
---CDS 5' incomplete
TBK1-203ENST00000538890.5547103aaENSP00000445834.1
 
Protein coding
-F5H1A3 -TSL:4CDS 3' incomplete
TBK1-205ENST00000540417.151398aaENSP00000445628.1
 
Protein coding
-F5H206 -TSL:4CDS 3' incomplete
TBK1-259ENST00000678368.148429aaENSP00000504296.1
 
Protein coding
---CDS 3' incomplete
TBK1-204ENST00000539810.141948aaENSP00000444428.1
 
Protein coding
-F5GZI4 -TSL:3CDS 3' incomplete
TBK1-236ENST00000676983.1308103aaENSP00000503561.1
 
Protein coding
---CDS 5' and 3' incomplete
TBK1-222ENST00000676469.124872aaENSP00000503155.1
 
Protein coding
---CDS 3' incomplete
TBK1-254ENST00000678079.123478aaENSP00000503613.1
 
Protein coding
---CDS 5' and 3' incomplete
TBK1-243ENST00000677545.120924aaENSP00000504729.1
 
Protein coding
---CDS 3' incomplete
TBK1-255ENST00000678125.111137aaENSP00000504253.1
 
Protein coding
---CDS 5' and 3' incomplete
TBK1-232ENST00000676809.13273511aaENSP00000504298.1
 
Nonsense mediated decay
----
TBK1-211ENST00000650786.1324440aaENSP00000498280.1
 
Nonsense mediated decay
-A0A494BZY3 --
TBK1-213ENST00000650997.13178731aaENSP00000498341.1
 
Nonsense mediated decay
-A0A494C045 --
TBK1-216ENST00000651878.13151240aaENSP00000499077.1
 
Nonsense mediated decay
-A0A494C1I2 --
TBK1-242ENST00000677499.13108575aaENSP00000502875.1
 
Nonsense mediated decay
----
TBK1-220ENST00000652537.13092575aaENSP00000499102.1
 
Nonsense mediated decay
-A0A494C1M6 --
TBK1-251ENST00000677831.12960541aaENSP00000503760.1
 
Nonsense mediated decay
----
TBK1-215ENST00000651262.12902551aaENSP00000498461.1
 
Nonsense mediated decay
-A0A494C0A8 --
TBK1-209ENST00000650708.12751542aaENSP00000498667.1
 
Nonsense mediated decay
-A0A494C0R4 -CDS 5' incomplete
TBK1-219ENST00000652389.12285519aaENSP00000498414.1
 
Nonsense mediated decay
-A0A494C079 --
TBK1-240ENST00000677313.1100830aaENSP00000503363.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-264ENST00000678738.187586aaENSP00000503263.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-237ENST00000677016.175786aaENSP00000504578.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-238ENST00000677112.159563aaENSP00000504208.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-250ENST00000677759.155886aaENSP00000503847.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-261ENST00000678567.150990aaENSP00000504755.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-269ENST00000679050.150250aaENSP00000503595.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-263ENST00000678718.147879aaENSP00000504038.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-253ENST00000677973.147362aaENSP00000503248.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-271ENST00000679302.146945aaENSP00000503553.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-265ENST00000678808.144364aaENSP00000503260.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-223ENST00000676490.143877aaENSP00000503569.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-224ENST00000676521.143364aaENSP00000503000.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-207ENST00000545025.237144aaENSP00000504046.1
 
Nonsense mediated decay
---TSL:2CDS 5' incomplete
TBK1-262ENST00000678582.135736aaENSP00000504002.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-252ENST00000677858.131247aaENSP00000502994.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-241ENST00000677435.130142aaENSP00000504836.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-225ENST00000676539.130040aaENSP00000504315.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-267ENST00000678996.123841aaENSP00000503169.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-218ENST00000651947.11786No protein-
 
Processed transcript
----
TBK1-266ENST00000678992.1756No protein-
 
Processed transcript
----
TBK1-233ENST00000676901.1232No protein-
 
Processed transcript
----
TBK1-258ENST00000678235.1210No protein-
 
Processed transcript
----
TBK1-239ENST00000677242.1191No protein-
 
Processed transcript
----
TBK1-247ENST00000677670.1145No protein-
 
Processed transcript
----
TBK1-249ENST00000677714.160No protein-
 
Processed transcript
----
TBK1-248ENST00000677686.15944No protein-
 
Retained intron
----
TBK1-230ENST00000676684.13629No protein-
 
Retained intron
----
TBK1-229ENST00000676654.13204No protein-
 
Retained intron
----
TBK1-257ENST00000678197.12906No protein-
 
Retained intron
----
TBK1-226ENST00000676551.12331No protein-
 
Retained intron
----
TBK1-244ENST00000677549.11987No protein-
 
Retained intron
----
TBK1-208ENST00000545392.21781No protein-
 
Retained intron
---TSL:3
TBK1-217ENST00000651889.11573No protein-
 
Retained intron
----
TBK1-206ENST00000541805.21380No protein-
 
Retained intron
---TSL:3
TBK1-260ENST00000678430.11261No protein-
 
Retained intron
----
TBK1-231ENST00000676774.11160No protein-
 
Retained intron
----
TBK1-270ENST00000679065.11075No protein-
 
Retained intron
----
TBK1-268ENST00000679010.1957No protein-
 
Retained intron
----
TBK1-202ENST00000536906.1756No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 4, Coding exons: 3, Transcript length: 558 bps, Translation length: 86 residues

Incomplete CDS

CDS 5' incomplete

Version

ENST00000677759.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred exon combination [Definitions]

RNA-Seq supported only

Transcript-based displays

    HASH(0x24a3ba60)