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EnsemblEnsembl Home
Description

cancer susceptibility 15 [Source:HGNC Symbol;Acc:HGNC:28245]

Gene Synonyms

LINC00340, lnc-SOX4-1

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
CASC15-303ENST00000671160.11321No protein-
 
lncRNA
--Ensembl Canonical
CASC15-204ENST00000605917.14461No protein-
 
lncRNA
--TSL:NA
CASC15-285ENST00000666379.14400No protein-
 
lncRNA
--GENCODE basic
CASC15-205ENST00000606197.24297No protein-
 
lncRNA
--GENCODE basicTSL:2
CASC15-223ENST00000652717.14025No protein-
 
lncRNA
---
CASC15-262ENST00000661893.13911No protein-
 
lncRNA
---
CASC15-218ENST00000651751.23629No protein-
 
lncRNA
---
CASC15-220ENST00000652000.13486No protein-
 
lncRNA
--GENCODE basic
CASC15-222ENST00000652256.13456No protein-
 
lncRNA
--GENCODE basic
CASC15-239ENST00000655700.13415No protein-
 
lncRNA
---
CASC15-246ENST00000657828.13331No protein-
 
lncRNA
---
CASC15-254ENST00000659780.13172No protein-
 
lncRNA
---
CASC15-284ENST00000666201.13047No protein-
 
lncRNA
---
CASC15-271ENST00000664406.12765No protein-
 
lncRNA
---
CASC15-216ENST00000651569.12438No protein-
 
lncRNA
--GENCODE basic
CASC15-221ENST00000652081.12387No protein-
 
lncRNA
--GENCODE basic
CASC15-203ENST00000567753.22162No protein-
 
lncRNA
--GENCODE basicTSL:NA
CASC15-252ENST00000659457.12076No protein-
 
lncRNA
---
CASC15-297ENST00000669448.12069No protein-
 
lncRNA
---
CASC15-212ENST00000651007.11967No protein-
 
lncRNA
---
CASC15-207ENST00000606851.51889No protein-
 
lncRNA
--TSL:2
CASC15-243ENST00000657548.11811No protein-
 
lncRNA
---
CASC15-244ENST00000657660.11795No protein-
 
lncRNA
--GENCODE basic
CASC15-236ENST00000655154.11742No protein-
 
lncRNA
---
CASC15-211ENST00000650782.11676No protein-
 
lncRNA
--GENCODE basic
CASC15-277ENST00000664756.11667No protein-
 
lncRNA
---
CASC15-291ENST00000668137.11661No protein-
 
lncRNA
---
CASC15-210ENST00000650720.21652No protein-
 
lncRNA
---
CASC15-289ENST00000667719.11644No protein-
 
lncRNA
---
CASC15-227ENST00000653320.11639No protein-
 
lncRNA
---
CASC15-224ENST00000653010.11635No protein-
 
lncRNA
---
CASC15-208ENST00000607048.51634No protein-
 
lncRNA
--GENCODE basicTSL:2
CASC15-278ENST00000664780.11621No protein-
 
lncRNA
---
CASC15-229ENST00000653997.11616No protein-
 
lncRNA
--GENCODE basic
CASC15-300ENST00000670293.11573No protein-
 
lncRNA
--GENCODE basic
CASC15-301ENST00000670467.11523No protein-
 
lncRNA
---
CASC15-305ENST00000671659.11513No protein-
 
lncRNA
---
CASC15-231ENST00000654774.11499No protein-
 
lncRNA
---
CASC15-201ENST00000444265.61497No protein-
 
lncRNA
--GENCODE basicTSL:1
CASC15-235ENST00000654942.11497No protein-
 
lncRNA
--GENCODE basic
CASC15-281ENST00000665014.11492No protein-
 
lncRNA
---
CASC15-213ENST00000651125.11487No protein-
 
lncRNA
---
CASC15-202ENST00000561912.31484No protein-
 
lncRNA
--GENCODE basicTSL:5
CASC15-250ENST00000658974.11484No protein-
 
lncRNA
---
CASC15-279ENST00000664808.11480No protein-
 
lncRNA
---
CASC15-268ENST00000663957.11470No protein-
 
lncRNA
---
CASC15-257ENST00000660518.11464No protein-
 
lncRNA
---
CASC15-253ENST00000659720.11455No protein-
 
lncRNA
---
CASC15-293ENST00000668355.11445No protein-
 
lncRNA
---
CASC15-299ENST00000669942.11442No protein-
 
lncRNA
--GENCODE basic
CASC15-274ENST00000664560.11435No protein-
 
lncRNA
--GENCODE basic
CASC15-298ENST00000669670.11435No protein-
 
lncRNA
---
CASC15-258ENST00000660934.11413No protein-
 
lncRNA
---
CASC15-302ENST00000671013.11402No protein-
 
lncRNA
---
CASC15-233ENST00000654807.11397No protein-
 
lncRNA
---
CASC15-270ENST00000664020.11378No protein-
 
lncRNA
---
CASC15-294ENST00000668404.11373No protein-
 
lncRNA
--GENCODE basic
CASC15-255ENST00000659886.11361No protein-
 
lncRNA
---
CASC15-219ENST00000651758.11357No protein-
 
lncRNA
---
CASC15-286ENST00000666875.11356No protein-
 
lncRNA
---
CASC15-267ENST00000663874.11343No protein-
 
lncRNA
---
CASC15-225ENST00000653161.11341No protein-
 
lncRNA
---
CASC15-264ENST00000662187.11316No protein-
 
lncRNA
--GENCODE basic
CASC15-217ENST00000651620.11310No protein-
 
lncRNA
---
CASC15-237ENST00000655292.11309No protein-
 
lncRNA
---
CASC15-296ENST00000669171.11306No protein-
 
lncRNA
---
CASC15-206ENST00000606336.51288No protein-
 
lncRNA
--GENCODE basicTSL:1
CASC15-280ENST00000664889.11274No protein-
 
lncRNA
---
CASC15-292ENST00000668219.11271No protein-
 
lncRNA
---
CASC15-266ENST00000662805.11269No protein-
 
lncRNA
---
CASC15-245ENST00000657825.11268No protein-
 
lncRNA
---
CASC15-272ENST00000664431.11264No protein-
 
lncRNA
---
CASC15-256ENST00000660187.11257No protein-
 
lncRNA
---
CASC15-228ENST00000653763.11234No protein-
 
lncRNA
---
CASC15-273ENST00000664500.11230No protein-
 
lncRNA
---
CASC15-242ENST00000655886.11226No protein-
 
lncRNA
---
CASC15-260ENST00000661662.11224No protein-
 
lncRNA
---
CASC15-238ENST00000655498.11204No protein-
 
lncRNA
---
CASC15-259ENST00000661200.11189No protein-
 
lncRNA
---
CASC15-290ENST00000667830.11188No protein-
 
lncRNA
--GENCODE basic
CASC15-209ENST00000636388.11174No protein-
 
lncRNA
--TSL:5
CASC15-275ENST00000664625.11167No protein-
 
lncRNA
---
CASC15-230ENST00000654262.11154No protein-
 
lncRNA
---
CASC15-276ENST00000664716.11116No protein-
 
lncRNA
---
CASC15-282ENST00000665902.11098No protein-
 
lncRNA
---
CASC15-288ENST00000667291.11078No protein-
 
lncRNA
--GENCODE basic
CASC15-226ENST00000653246.11062No protein-
 
lncRNA
---
CASC15-232ENST00000654782.11036No protein-
 
lncRNA
---
CASC15-283ENST00000666108.1985No protein-
 
lncRNA
---
CASC15-240ENST00000655702.1982No protein-
 
lncRNA
---
CASC15-263ENST00000662172.1979No protein-
 
lncRNA
--GENCODE basic
CASC15-241ENST00000655824.1974No protein-
 
lncRNA
---
CASC15-249ENST00000658841.1959No protein-
 
lncRNA
---
CASC15-251ENST00000659237.1952No protein-
 
lncRNA
---
CASC15-214ENST00000651277.1831No protein-
 
lncRNA
---
CASC15-295ENST00000668839.1815No protein-
 
lncRNA
---
CASC15-304ENST00000671524.1805No protein-
 
lncRNA
---
CASC15-234ENST00000654918.1752No protein-
 
lncRNA
---
CASC15-247ENST00000658187.1740No protein-
 
lncRNA
---
CASC15-215ENST00000651481.1732No protein-
 
lncRNA
---
CASC15-248ENST00000658810.1710No protein-
 
lncRNA
---
CASC15-287ENST00000667176.1704No protein-
 
lncRNA
---
CASC15-261ENST00000661722.1633No protein-
 
lncRNA
---
CASC15-265ENST00000662510.1600No protein-
 
lncRNA
---
CASC15-269ENST00000663998.1550No protein-
 
lncRNA
---
Description

MIA SH3 domain ER export factor 2 [Source:MGI Symbol;Acc:MGI:2159614]

Gene Synonyms

Ctage5, D12Bwg0579e, MEA6, Mgea, Mgea6

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Mia2-201ENSMUST00000069430.152869794aaENSMUSP00000070572.9
 
Protein coding
CCDS36458E9Q3S2 GENCODE basicTSL:1
Mia2-202ENSMUST00000170992.92785772aaENSMUSP00000126538.3
 
Protein coding
CCDS49071E9PY90 GENCODE basicTSL:1
Mia2-216ENSMUST00000176892.82784761aaENSMUSP00000135245.2
 
Protein coding
CCDS56840H3BK44 GENCODE basicTSL:1
Mia2-212ENSMUST00000176464.84434796aaENSMUSP00000135390.2
 
Protein coding
-H3BKH2 GENCODE basicTSL:5
Mia2-222ENSMUST00000219140.341941397aaENSMUSP00000151482.3
 
Protein coding
-A0A1W2P711 GENCODE basicAPPRIS P1TSL:5
Mia2-208ENSMUST00000175912.82885785aaENSMUSP00000135251.2
 
Protein coding
-H3BK48 GENCODE basicTSL:5
Mia2-219ENSMUST00000177225.82872725aaENSMUSP00000135618.2
 
Protein coding
-H3BL19 GENCODE basicTSL:5
Mia2-217ENSMUST00000177162.82728753aaENSMUSP00000135001.2
 
Protein coding
-H3BJI6 GENCODE basicTSL:5
Mia2-210ENSMUST00000176322.82649805aaENSMUSP00000135100.2
 
Protein coding
-H3BJS0 GENCODE basicTSL:5
Mia2-207ENSMUST00000175877.82612701aaENSMUSP00000135440.2
 
Protein coding
-H3BKL6 GENCODE basicTSL:5
Mia2-220ENSMUST00000177370.8660185aaENSMUSP00000135179.2
 
Protein coding
-H3BJY7 TSL:3CDS 3' incomplete
Mia2-221ENSMUST00000177460.8466136aaENSMUSP00000134887.2
 
Protein coding
-H3BJ84 TSL:3CDS 3' incomplete
Mia2-215ENSMUST00000176752.8284465aaENSMUSP00000134972.2
 
Nonsense mediated decay
-H3BL86 TSL:5
Mia2-211ENSMUST00000176336.82291514aaENSMUSP00000134872.2
 
Nonsense mediated decay
-H3BJ71 TSL:5CDS 5' incomplete
Mia2-213ENSMUST00000176617.81935269aaENSMUSP00000135105.2
 
Nonsense mediated decay
-H3BJS5 TSL:1CDS 5' incomplete
Mia2-214ENSMUST00000176727.8122265aaENSMUSP00000135694.2
 
Nonsense mediated decay
-H3BL86 TSL:1
Mia2-206ENSMUST00000175837.2796147aaENSMUSP00000134828.2
 
Nonsense mediated decay
-H3BJ35 TSL:5CDS 5' incomplete
Mia2-203ENSMUST00000175659.83815No protein-
 
Retained intron
--TSL:1
Mia2-223ENSMUST00000221093.21629No protein-
 
Retained intron
--TSL:1
Mia2-204ENSMUST00000175685.2881No protein-
 
Retained intron
--TSL:2
Mia2-218ENSMUST00000177222.8758No protein-
 
Retained intron
--TSL:5
Mia2-205ENSMUST00000175803.2644No protein-
 
Retained intron
--TSL:3
Mia2-209ENSMUST00000176223.2206No protein-
 
Retained intron
--TSL:3
Description

sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]

Gene Synonyms

SDP1, SH3PX1, SH3PXD3A

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SNX9-201ENST00000392185.84216595aaENSP00000376024.3
 
Protein coding
CCDS5253Q9Y5X1 NM_016224.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
SNX9-205ENST00000679732.14231628aaENSP00000505311.1
 
Protein coding
---GENCODE basic
SNX9-215ENST00000680863.13828625aaENSP00000505291.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
SNX9-209ENST00000680078.13634585aaENSP00000505598.1
 
Protein coding
---GENCODE basic
SNX9-204ENST00000679691.13548588aaENSP00000505486.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
SNX9-221ENST00000681534.13448632aaENSP00000505127.1
 
Protein coding
---GENCODE basic
SNX9-218ENST00000681183.13434591aaENSP00000505072.1
 
Protein coding
---GENCODE basic
SNX9-217ENST00000681138.13358499aaENSP00000505392.1
 
Protein coding
---GENCODE basic
SNX9-219ENST00000681186.13196577aaENSP00000506632.1
 
Protein coding
---GENCODE basic
SNX9-213ENST00000680495.12703270aaENSP00000505186.1
 
Protein coding
---GENCODE basic
SNX9-203ENST00000614800.455363aaENSP00000479382.1
 
Protein coding
-A0A087WVE4 -TSL:4CDS 3' incomplete
SNX9-202ENST00000614703.454284aaENSP00000482920.1
 
Protein coding
-A0A087WZW2 -TSL:4CDS 3' incomplete
SNX9-207ENST00000679814.13079595aaENSP00000506326.1
 
Nonsense mediated decay
CCDS5253---
SNX9-222ENST00000681651.13978122aaENSP00000505173.1
 
Nonsense mediated decay
----
SNX9-206ENST00000679790.1318047aaENSP00000506493.1
 
Nonsense mediated decay
----
SNX9-223ENST00000681881.18152No protein-
 
Retained intron
----
SNX9-210ENST00000680089.17116No protein-
 
Retained intron
----
SNX9-212ENST00000680464.15806No protein-
 
Retained intron
----
SNX9-216ENST00000680974.14752No protein-
 
Retained intron
----
SNX9-214ENST00000680680.14745No protein-
 
Retained intron
----
SNX9-220ENST00000681469.13103No protein-
 
Retained intron
----
SNX9-211ENST00000680095.11979No protein-
 
Retained intron
----
SNX9-208ENST00000680015.11484No protein-
 
Retained intron
----
Description

eukaryotic translation initiation factor 4E family member 2 [Source:RGD Symbol;Acc:1307790]

Gene Synonyms

Eif4el3, LOC363275

Location
NameTranscript IDbpProteinTranslation IDBiotypeUniProt MatchFlags
Eif4e2-202ENSRNOT00000065743.31444174aaENSRNOP00000061077.1
 
Protein coding
D4A174 -
Eif4e2-206ENSRNOT00000092534.11108230aaENSRNOP00000075812.1
 
Protein coding
A0A0U1RRU1 APPRIS ALT2CDS 5' incomplete
Eif4e2-204ENSRNOT00000085476.11044256aaENSRNOP00000074842.1
 
Protein coding
A0A0G2K933 APPRIS P5
Eif4e2-201ENSRNOT00000026646.51035240aaENSRNOP00000026646.3
 
Protein coding
F1M470 APPRIS ALT2
Eif4e2-203ENSRNOT00000077005.11020227aaENSRNOP00000068342.1
 
Protein coding
A0A096MK14 APPRIS ALT2CDS 5' incomplete
Eif4e2-205ENSRNOT00000092493.133686aaENSRNOP00000075858.1
 
Protein coding
A0A0U1RRY1 CDS 5' incomplete
Description

Pvt1 oncogene [Source:HGNC Symbol;Acc:HGNC:9709]

Gene Synonyms

LINC00079, MIR1204HG, NCRNA00079, onco-lncRNA-100

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
PVT1-224ENST00000651587.12444No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
PVT1-293ENST00000660438.12450No protein-
 
lncRNA
--GENCODE basic
PVT1-216ENST00000523068.22255No protein-
 
lncRNA
--GENCODE basicTSL:5
PVT1-323ENST00000664995.12230No protein-
 
lncRNA
--GENCODE basic
PVT1-283ENST00000659106.12187No protein-
 
lncRNA
---
PVT1-295ENST00000660631.12161No protein-
 
lncRNA
---
PVT1-265ENST00000657449.12149No protein-
 
lncRNA
--GENCODE basic
PVT1-347ENST00000667418.12143No protein-
 
lncRNA
--GENCODE basic
PVT1-336ENST00000666147.12097No protein-
 
lncRNA
---
PVT1-254ENST00000656693.11990No protein-
 
lncRNA
--GENCODE basic
PVT1-351ENST00000668098.11985No protein-
 
lncRNA
---
PVT1-331ENST00000665856.11965No protein-
 
lncRNA
--GENCODE basic
PVT1-253ENST00000656532.11909No protein-
 
lncRNA
---
PVT1-368ENST00000670532.11840No protein-
 
lncRNA
--GENCODE basic
PVT1-294ENST00000660456.11814No protein-
 
lncRNA
---
PVT1-372ENST00000670714.11756No protein-
 
lncRNA
---
PVT1-288ENST00000659912.11744No protein-
 
lncRNA
---
PVT1-282ENST00000658840.11738No protein-
 
lncRNA
--GENCODE basic
PVT1-308ENST00000662413.11727No protein-
 
lncRNA
---
PVT1-317ENST00000664265.11720No protein-
 
lncRNA
--GENCODE basic
PVT1-284ENST00000659326.11706No protein-
 
lncRNA
--GENCODE basic
PVT1-346ENST00000667305.11701No protein-
 
lncRNA
---
PVT1-203ENST00000513868.61699No protein-
 
lncRNA
--GENCODE basicTSL:1
PVT1-263ENST00000657356.11697No protein-
 
lncRNA
--GENCODE basic
PVT1-357ENST00000668619.11685No protein-
 
lncRNA
---
PVT1-307ENST00000662410.11668No protein-
 
lncRNA
---
PVT1-349ENST00000667630.11634No protein-
 
lncRNA
---
PVT1-340ENST00000666776.11628No protein-
 
lncRNA
--GENCODE basic
PVT1-215ENST00000522963.61619No protein-
 
lncRNA
--GENCODE basicTSL:4
PVT1-229ENST00000652816.11610No protein-
 
lncRNA
---
PVT1-366ENST00000670204.11600No protein-
 
lncRNA
--GENCODE basic
PVT1-250ENST00000656402.11585No protein-
 
lncRNA
---
PVT1-261ENST00000657289.11581No protein-
 
lncRNA
---
PVT1-305ENST00000661988.11580No protein-
 
lncRNA
---
PVT1-210ENST00000521122.21578No protein-
 
lncRNA
--GENCODE basicTSL:3
PVT1-341ENST00000666777.11555No protein-
 
lncRNA
---
PVT1-300ENST00000661160.11546No protein-
 
lncRNA
---
PVT1-212ENST00000521951.11535No protein-
 
lncRNA
--TSL:1
PVT1-286ENST00000659666.11533No protein-
 
lncRNA
--GENCODE basic
PVT1-303ENST00000661625.11519No protein-
 
lncRNA
--GENCODE basic
PVT1-362ENST00000669416.11516No protein-
 
lncRNA
---
PVT1-205ENST00000517790.21513No protein-
 
lncRNA
--TSL:2
PVT1-258ENST00000657112.11499No protein-
 
lncRNA
---
PVT1-304ENST00000661830.11490No protein-
 
lncRNA
---
PVT1-237ENST00000653853.11490No protein-
 
lncRNA
---
PVT1-364ENST00000669951.11485No protein-
 
lncRNA
---
PVT1-242ENST00000654369.11482No protein-
 
lncRNA
---
PVT1-334ENST00000666080.11481No protein-
 
lncRNA
---
PVT1-312ENST00000663461.11471No protein-
 
lncRNA
---
PVT1-344ENST00000667149.11463No protein-
 
lncRNA
---
PVT1-240ENST00000654105.11460No protein-
 
lncRNA
---
PVT1-268ENST00000657596.11455No protein-
 
lncRNA
---
PVT1-266ENST00000657451.11454No protein-
 
lncRNA
---
PVT1-301ENST00000661205.11449No protein-
 
lncRNA
---
PVT1-352ENST00000668123.11433No protein-
 
lncRNA
---
PVT1-360ENST00000669272.11417No protein-
 
lncRNA
---
PVT1-241ENST00000654324.11411No protein-
 
lncRNA
---
PVT1-330ENST00000665737.11410No protein-
 
lncRNA
---
PVT1-279ENST00000658350.11402No protein-
 
lncRNA
---
PVT1-319ENST00000664299.11396No protein-
 
lncRNA
---
PVT1-375ENST00000671092.11393No protein-
 
lncRNA
---
PVT1-269ENST00000657667.11378No protein-
 
lncRNA
---
PVT1-285ENST00000659625.11363No protein-
 
lncRNA
---
PVT1-260ENST00000657211.11353No protein-
 
lncRNA
---
PVT1-373ENST00000670795.11348No protein-
 
lncRNA
---
PVT1-311ENST00000663059.11330No protein-
 
lncRNA
---
PVT1-238ENST00000653990.11329No protein-
 
lncRNA
---
PVT1-367ENST00000670223.11321No protein-
 
lncRNA
---
PVT1-257ENST00000656999.11314No protein-
 
lncRNA
---
PVT1-338ENST00000666353.11312No protein-
 
lncRNA
---
PVT1-239ENST00000654091.11311No protein-
 
lncRNA
---
PVT1-251ENST00000656411.11281No protein-
 
lncRNA
---
PVT1-358ENST00000669082.11280No protein-
 
lncRNA
---
PVT1-233ENST00000653497.11278No protein-
 
lncRNA
---
PVT1-234ENST00000653522.11275No protein-
 
lncRNA
---
PVT1-350ENST00000667714.11269No protein-
 
lncRNA
---
PVT1-236ENST00000653845.11262No protein-
 
lncRNA
---
PVT1-267ENST00000657517.11253No protein-
 
lncRNA
---
PVT1-318ENST00000664293.11206No protein-
 
lncRNA
---
PVT1-314ENST00000663753.11206No protein-
 
lncRNA
---
PVT1-321ENST00000664742.11200No protein-
 
lncRNA
---
PVT1-290ENST00000660122.11199No protein-
 
lncRNA
---
PVT1-204ENST00000517525.21194No protein-
 
lncRNA
--TSL:3
PVT1-374ENST00000671088.11191No protein-
 
lncRNA
---
PVT1-259ENST00000657183.11172No protein-
 
lncRNA
--GENCODE basic
PVT1-252ENST00000656491.11167No protein-
 
lncRNA
---
PVT1-281ENST00000658556.11163No protein-
 
lncRNA
---
PVT1-329ENST00000665721.11162No protein-
 
lncRNA
---
PVT1-359ENST00000669132.11156No protein-
 
lncRNA
---
PVT1-310ENST00000662766.11152No protein-
 
lncRNA
---
PVT1-292ENST00000660200.11139No protein-
 
lncRNA
--GENCODE basic
PVT1-306ENST00000662061.11139No protein-
 
lncRNA
---
PVT1-213ENST00000522414.21132No protein-
 
lncRNA
--TSL:2
PVT1-298ENST00000660896.11128No protein-
 
lncRNA
---
PVT1-227ENST00000652695.11126No protein-
 
lncRNA
---
PVT1-370ENST00000670602.11124No protein-
 
lncRNA
---
PVT1-246ENST00000655783.11118No protein-
 
lncRNA
---
PVT1-220ENST00000524165.61114No protein-
 
lncRNA
--TSL:2
PVT1-320ENST00000664610.11114No protein-
 
lncRNA
---
PVT1-371ENST00000670626.11114No protein-
 
lncRNA
---
PVT1-202ENST00000512617.71109No protein-
 
lncRNA
--TSL:3
PVT1-247ENST00000656077.11109No protein-
 
lncRNA
--GENCODE basic
PVT1-326ENST00000665246.11096No protein-
 
lncRNA
---
PVT1-355ENST00000668479.11091No protein-
 
lncRNA
---
PVT1-264ENST00000657384.11068No protein-
 
lncRNA
---
PVT1-363ENST00000669509.11066No protein-
 
lncRNA
---
PVT1-333ENST00000666076.11062No protein-
 
lncRNA
---
PVT1-218ENST00000523328.61047No protein-
 
lncRNA
--TSL:1
PVT1-348ENST00000667539.11041No protein-
 
lncRNA
---
PVT1-315ENST00000664139.11036No protein-
 
lncRNA
---
PVT1-221ENST00000650846.11020No protein-
 
lncRNA
---
PVT1-342ENST00000666842.11019No protein-
 
lncRNA
---
PVT1-226ENST00000652492.11017No protein-
 
lncRNA
--GENCODE basic
PVT1-255ENST00000656880.11017No protein-
 
lncRNA
---
PVT1-201ENST00000504719.71017No protein-
 
lncRNA
--TSL:2
PVT1-208ENST00000519481.61010No protein-
 
lncRNA
--TSL:2
PVT1-339ENST00000666452.11001No protein-
 
lncRNA
---
PVT1-328ENST00000665698.11000No protein-
 
lncRNA
---
PVT1-207ENST00000518528.2995No protein-
 
lncRNA
--TSL:3
PVT1-245ENST00000655594.1978No protein-
 
lncRNA
---
PVT1-271ENST00000657693.1977No protein-
 
lncRNA
---
PVT1-223ENST00000651568.1971No protein-
 
lncRNA
--GENCODE basic
PVT1-324ENST00000665166.1965No protein-
 
lncRNA
---
PVT1-325ENST00000665175.1964No protein-
 
lncRNA
---
PVT1-217ENST00000523190.6963No protein-
 
lncRNA
--TSL:3
PVT1-337ENST00000666223.1963No protein-
 
lncRNA
---
PVT1-356ENST00000668480.1956No protein-
 
lncRNA
---
PVT1-249ENST00000656396.1938No protein-
 
lncRNA
---
PVT1-248ENST00000656168.1935No protein-
 
lncRNA
--GENCODE basic
PVT1-302ENST00000661391.1924No protein-
 
lncRNA
---
PVT1-214ENST00000522875.5922No protein-
 
lncRNA
--TSL:5
PVT1-225ENST00000651664.1914No protein-
 
lncRNA
---
PVT1-276ENST00000658158.1909No protein-
 
lncRNA
--GENCODE basic
PVT1-262ENST00000657297.1907No protein-
 
lncRNA
---
PVT1-235ENST00000653608.1906No protein-
 
lncRNA
---
PVT1-256ENST00000656948.1904No protein-
 
lncRNA
---
PVT1-345ENST00000667204.1897No protein-
 
lncRNA
---
PVT1-361ENST00000669407.1890No protein-
 
lncRNA
---
PVT1-322ENST00000664924.1886No protein-
 
lncRNA
---
PVT1-369ENST00000670535.1876No protein-
 
lncRNA
---
PVT1-289ENST00000660069.1870No protein-
 
lncRNA
---
PVT1-231ENST00000652993.1866No protein-
 
lncRNA
---
PVT1-316ENST00000664214.1861No protein-
 
lncRNA
---
PVT1-309ENST00000662709.1858No protein-
 
lncRNA
---
PVT1-243ENST00000655099.1855No protein-
 
lncRNA
---
PVT1-297ENST00000660781.1854No protein-
 
lncRNA
---
PVT1-219ENST00000523427.2837No protein-
 
lncRNA
--TSL:3
PVT1-209ENST00000520913.2835No protein-
 
lncRNA
--TSL:2
PVT1-343ENST00000666878.1830No protein-
 
lncRNA
---
PVT1-230ENST00000652883.1821No protein-
 
lncRNA
---
PVT1-206ENST00000517838.6821No protein-
 
lncRNA
--TSL:2
PVT1-274ENST00000658018.1820No protein-
 
lncRNA
---
PVT1-228ENST00000652728.1812No protein-
 
lncRNA
---
PVT1-376ENST00000671587.1803No protein-
 
lncRNA
---
PVT1-287ENST00000659892.1782No protein-
 
lncRNA
---
PVT1-222ENST00000650930.1777No protein-
 
lncRNA
---
PVT1-291ENST00000660146.1764No protein-
 
lncRNA
---
PVT1-327ENST00000665372.1762No protein-
 
lncRNA
---
PVT1-280ENST00000658429.1760No protein-
 
lncRNA
---
PVT1-354ENST00000668351.1759No protein-
 
lncRNA
---
PVT1-299ENST00000660912.1754No protein-
 
lncRNA
---
PVT1-275ENST00000658065.1745No protein-
 
lncRNA
---
PVT1-244ENST00000655148.1724No protein-
 
lncRNA
---
PVT1-273ENST00000657945.1678No protein-
 
lncRNA
---
PVT1-296ENST00000660659.1673No protein-
 
lncRNA
---
PVT1-278ENST00000658305.1641No protein-
 
lncRNA
---
PVT1-232ENST00000653406.1619No protein-
 
lncRNA
---
PVT1-313ENST00000663715.1615No protein-
 
lncRNA
---
PVT1-270ENST00000657682.1611No protein-
 
lncRNA
---
PVT1-272ENST00000657844.1609No protein-
 
lncRNA
---
PVT1-335ENST00000666105.1608No protein-
 
lncRNA
---
PVT1-353ENST00000668215.1590No protein-
 
lncRNA
---
PVT1-332ENST00000666039.1520No protein-
 
lncRNA
---
PVT1-365ENST00000670009.1456No protein-
 
lncRNA
---
PVT1-277ENST00000658242.1432No protein-
 
lncRNA
---
PVT1-211ENST00000521600.5408No protein-
 
lncRNA
--TSL:2
Description

BCAS3 microtubule associated cell migration factor [Source:HGNC Symbol;Acc:HGNC:14347]

Gene Synonyms

FLJ20128

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
BCAS3-202ENST00000407086.83517913aaENSP00000385323.2
 
Protein coding
CCDS11626Q9H6U6-2 NM_017679.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
BCAS3-222ENST00000589222.53673928aaENSP00000466078.1
 
Protein coding
CCDS82177Q9H6U6-7 -GENCODE basicAPPRIS ALT2TSL:1
BCAS3-217ENST00000588462.53559950aaENSP00000468592.1
 
Protein coding
CCDS82176Q9H6U6-8 -GENCODE basicTSL:5
BCAS3-201ENST00000390652.93531928aaENSP00000375067.4
 
Protein coding
CCDS45749Q9H6U6-1 -GENCODE basicTSL:1
BCAS3-203ENST00000408905.73514935aaENSP00000386173.2
 
Protein coding
CCDS82178Q9H6U6-3 -GENCODE basicAPPRIS ALT2TSL:5
BCAS3-221ENST00000588874.52948684aaENSP00000464825.1
 
Protein coding
-Q9H6U6-6 -GENCODE basicAPPRIS ALT2TSL:2
BCAS3-204ENST00000585744.52203699aaENSP00000468682.1
 
Protein coding
-K7ESE9 -GENCODE basicTSL:5
BCAS3-209ENST00000586484.1747184aaENSP00000466552.1
 
Protein coding
-K7EML5 -TSL:5CDS 3' incomplete
BCAS3-224ENST00000590128.5633178aaENSP00000465175.1
 
Protein coding
-K7EJH7 -TSL:3CDS 3' incomplete
BCAS3-210ENST00000586705.5562145aaENSP00000465539.1
 
Protein coding
-K7EKB0 -TSL:4CDS 3' incomplete
BCAS3-211ENST00000587002.1550183aaENSP00000464711.1
 
Protein coding
-K7EIE2 -TSL:3CDS 5' and 3' incomplete
BCAS3-216ENST00000588168.5545135aaENSP00000465328.1
 
Protein coding
-K7EJU7 -TSL:5CDS 3' incomplete
BCAS3-233ENST00000626960.222753aaENSP00000486318.1
 
Protein coding
-K7EQA6 -GENCODE basicTSL:5
BCAS3-234ENST00000639611.110836aaENSP00000492306.1
 
Protein coding
-K7EIR7 -GENCODE basicTSL:5
BCAS3-231ENST00000592848.591853aaENSP00000467743.1
 
Nonsense mediated decay
-K7EQA6 -TSL:5
BCAS3-218ENST00000588532.559453aaENSP00000465441.1
 
Nonsense mediated decay
-K7EQA6 -TSL:5
BCAS3-226ENST00000591147.559056aaENSP00000466075.1
 
Nonsense mediated decay
-K7ELH0 -TSL:3
BCAS3-208ENST00000586241.155836aaENSP00000464864.1
 
Nonsense mediated decay
-K7EIR7 -TSL:5
BCAS3-205ENST00000585812.52214No protein-
 
Processed transcript
---TSL:2
BCAS3-229ENST00000592702.52094No protein-
 
Processed transcript
---TSL:1
BCAS3-213ENST00000587294.5937No protein-
 
Processed transcript
---TSL:5
BCAS3-206ENST00000585979.5919No protein-
 
Processed transcript
---TSL:5
BCAS3-219ENST00000588569.1875No protein-
 
Processed transcript
---TSL:3
BCAS3-225ENST00000590352.1586No protein-
 
Processed transcript
---TSL:4
BCAS3-232ENST00000593004.5572No protein-
 
Processed transcript
---TSL:4
BCAS3-228ENST00000592393.5569No protein-
 
Processed transcript
---TSL:5
BCAS3-230ENST00000592827.1569No protein-
 
Processed transcript
---TSL:4
BCAS3-212ENST00000587037.5552No protein-
 
Processed transcript
---TSL:5
BCAS3-207ENST00000586041.1542No protein-
 
Processed transcript
---TSL:5
BCAS3-227ENST00000591371.5527No protein-
 
Processed transcript
---TSL:5
BCAS3-215ENST00000588008.1411No protein-
 
Processed transcript
---TSL:3
BCAS3-220ENST00000588720.14556No protein-
 
Retained intron
---TSL:NA
BCAS3-214ENST00000587872.12743No protein-
 
Retained intron
---TSL:NA
BCAS3-223ENST00000589916.5546No protein-
 
Retained intron
---TSL:2
Description

VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VRK1-201ENST00000216639.81663396aaENSP00000216639.3
 
Protein coding
CCDS9947Q99986 NM_003384.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VRK1-240ENST00000680756.12783396aaENSP00000506648.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-251ENST00000681344.11960396aaENSP00000506151.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-220ENST00000679816.11765396aaENSP00000506525.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-252ENST00000681355.11719396aaENSP00000506214.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-230ENST00000680335.15188375aaENSP00000505806.1
 
Protein coding
---GENCODE basic
VRK1-250ENST00000681249.12411395aaENSP00000506013.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-254ENST00000681419.11823393aaENSP00000505512.1
 
Protein coding
---GENCODE basic
VRK1-204ENST00000553683.21816420aaENSP00000451412.2
 
Protein coding
-H0YJF7 -GENCODE basicTSL:3
VRK1-239ENST00000680724.11813395aaENSP00000504891.1
 
Protein coding
---GENCODE basic
VRK1-219ENST00000679770.11704448aaENSP00000505214.1
 
Protein coding
---GENCODE basic
VRK1-249ENST00000681195.11697395aaENSP00000504933.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-238ENST00000680683.11682403aaENSP00000506334.1
 
Protein coding
---GENCODE basic
VRK1-216ENST00000679727.11673394aaENSP00000505844.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-223ENST00000679918.11638420aaENSP00000505439.1
 
Protein coding
---GENCODE basic
VRK1-241ENST00000680849.11634395aaENSP00000505602.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-256ENST00000681493.11625394aaENSP00000506429.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-212ENST00000679462.11527437aaENSP00000506011.1
 
Protein coding
---GENCODE basic
VRK1-226ENST00000680007.11525420aaENSP00000505683.1
 
Protein coding
---GENCODE basic
VRK1-242ENST00000680851.11511395aaENSP00000505159.1
 
Protein coding
---GENCODE basic
VRK1-222ENST00000679903.11444393aaENSP00000506022.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-237ENST00000680538.11435366aaENSP00000505611.1
 
Protein coding
---GENCODE basic
VRK1-263ENST00000681785.11375356aaENSP00000505166.1
 
Protein coding
---CDS 3' incomplete
VRK1-209ENST00000557352.21320394aaENSP00000451682.2
 
Protein coding
-H0YJJ9 -GENCODE basicTSL:5
VRK1-217ENST00000679736.11202244aaENSP00000506517.1
 
Protein coding
---GENCODE basic
VRK1-235ENST00000680509.11130356aaENSP00000505209.1
 
Protein coding
---CDS 3' incomplete
VRK1-248ENST00000681176.11009314aaENSP00000505454.1
 
Protein coding
---GENCODE basic
VRK1-208ENST00000557222.6922228aaENSP00000450820.2
 
Protein coding
-H0YJ50 -TSL:5CDS 3' incomplete
VRK1-257ENST00000681524.16456244aaENSP00000505783.1
 
Nonsense mediated decay
----
VRK1-234ENST00000680387.12689444aaENSP00000504908.1
 
Nonsense mediated decay
----
VRK1-247ENST00000681101.12040413aaENSP00000506564.1
 
Nonsense mediated decay
----
VRK1-224ENST00000679941.12036375aaENSP00000506520.1
 
Nonsense mediated decay
----
VRK1-244ENST00000680993.11932172aaENSP00000505511.1
 
Nonsense mediated decay
----
VRK1-253ENST00000681363.11882372aaENSP00000505564.1
 
Nonsense mediated decay
----
VRK1-262ENST00000681778.11869375aaENSP00000506049.1
 
Nonsense mediated decay
----
VRK1-218ENST00000679758.11681362aaENSP00000505539.1
 
Nonsense mediated decay
----
VRK1-225ENST00000679977.11657249aaENSP00000504897.1
 
Nonsense mediated decay
----
VRK1-210ENST00000679365.11635442aaENSP00000505882.1
 
Nonsense mediated decay
----
VRK1-258ENST00000681538.11580321aaENSP00000506662.1
 
Nonsense mediated decay
----
VRK1-215ENST00000679650.11528101aaENSP00000505156.1
 
Nonsense mediated decay
----
VRK1-243ENST00000680922.11520244aaENSP00000506480.1
 
Nonsense mediated decay
----
VRK1-261ENST00000681695.1140283aaENSP00000506225.1
 
Nonsense mediated decay
----
VRK1-259ENST00000681598.1139683aaENSP00000506128.1
 
Nonsense mediated decay
----
VRK1-236ENST00000680526.1134783aaENSP00000505595.1
 
Nonsense mediated decay
----
VRK1-260ENST00000681677.1129746aaENSP00000505010.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-214ENST00000679533.1128772aaENSP00000505873.1
 
Nonsense mediated decay
----
VRK1-255ENST00000681474.11280302aaENSP00000505569.1
 
Nonsense mediated decay
----
VRK1-245ENST00000681061.1121146aaENSP00000506083.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-246ENST00000681077.11193161aaENSP00000505642.1
 
Nonsense mediated decay
----
VRK1-233ENST00000680384.1118272aaENSP00000506237.1
 
Nonsense mediated decay
----
VRK1-232ENST00000680348.11070170aaENSP00000504922.1
 
Nonsense mediated decay
----
VRK1-228ENST00000680222.1100381aaENSP00000506647.1
 
Nonsense mediated decay
----
VRK1-231ENST00000680339.1947101aaENSP00000506470.1
 
Nonsense mediated decay
----
VRK1-221ENST00000679843.187352aaENSP00000506467.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-211ENST00000679452.178599aaENSP00000505395.1
 
Nonsense mediated decay
----
VRK1-229ENST00000680319.1750No protein-
 
Processed transcript
----
VRK1-205ENST00000555067.211646No protein-
 
Retained intron
---TSL:3
VRK1-213ENST00000679506.13648No protein-
 
Retained intron
----
VRK1-202ENST00000435624.32131No protein-
 
Retained intron
---TSL:5
VRK1-227ENST00000680084.12013No protein-
 
Retained intron
----
VRK1-203ENST00000495064.21829No protein-
 
Retained intron
---TSL:5
VRK1-206ENST00000555351.2968No protein-
 
Retained intron
---TSL:2
VRK1-207ENST00000555402.1415No protein-
 
Retained intron
---TSL:3
Description

ubiquinol-cytochrome c reductase complex assembly factor 1 [Source:MGI Symbol;Acc:MGI:1929472]

Gene Synonyms

2310079L17Rik, 2410003P15Rik, 3110038N19Rik, Bfzp, Cbp3, Uqcc, mbFZb

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Uqcc1-204ENSMUST00000109636.112633295aaENSMUSP00000105264.5
 
Protein coding
CCDS16957Q9CWU6-1 GENCODE basicAPPRIS P2TSL:1
Uqcc1-203ENSMUST00000109632.82313269aaENSMUSP00000105260.2
 
Protein coding
-A6PWX9 GENCODE basicTSL:5
Uqcc1-213ENSMUST00000152766.81234262aaENSMUSP00000122886.2
 
Protein coding
-A6PWX8 TSL:5CDS 5' incomplete
Uqcc1-202ENSMUST00000109631.81091227aaENSMUSP00000105259.2
 
Protein coding
-A6PWX7 GENCODE basicAPPRIS ALT2TSL:5
Uqcc1-201ENSMUST00000006036.13808215aaENSMUSP00000006036.7
 
Protein coding
-A6PWX5 GENCODE basicTSL:5
Uqcc1-208ENSMUST00000139232.8730243aaENSMUSP00000123019.2
 
Protein coding
-F6V305 TSL:5CDS 5' and 3' incomplete
Uqcc1-210ENSMUST00000142655.248733aaENSMUSP00000118094.3
 
Protein coding
-D6RJ23 TSL:5CDS 3' incomplete
Uqcc1-216ENSMUST00000159238.215945aaENSMUSP00000125200.2
 
Protein coding
-E0CXL8 TSL:5CDS 3' incomplete
Uqcc1-207ENSMUST00000136933.8241371aaENSMUSP00000116390.2
 
Nonsense mediated decay
-D6RHP7 TSL:1
Uqcc1-212ENSMUST00000151078.8210752aaENSMUSP00000123111.2
 
Nonsense mediated decay
-D6RDC3 TSL:5
Uqcc1-206ENSMUST00000133726.8679120aaENSMUSP00000121610.2
 
Nonsense mediated decay
-D6RJ83 TSL:5
Uqcc1-214ENSMUST00000152818.81997No protein-
 
Processed transcript
--TSL:1
Uqcc1-211ENSMUST00000146995.8630No protein-
 
Processed transcript
--TSL:3
Uqcc1-219ENSMUST00000162749.8624No protein-
 
Processed transcript
--TSL:3
Uqcc1-217ENSMUST00000161484.2480No protein-
 
Processed transcript
--TSL:3
Uqcc1-215ENSMUST00000155680.83067No protein-
 
Retained intron
--TSL:2
Uqcc1-205ENSMUST00000123790.81436No protein-
 
Retained intron
--TSL:2
Uqcc1-209ENSMUST00000141501.8757No protein-
 
Retained intron
--TSL:2
Uqcc1-218ENSMUST00000162258.8478No protein-
 
Retained intron
--TSL:2
Description

nucleoporin 214 [Source:HGNC Symbol;Acc:HGNC:8064]

Gene Synonyms

CAIN, CAN, D9S46E, N214

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
NUP214-201ENST00000359428.1075682090aaENSP00000352400.5
 
Protein coding
CCDS6940P35658-1 NM_005085.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
NUP214-202ENST00000411637.675382080aaENSP00000396576.2
 
Protein coding
CCDS83429P35658-4 -GENCODE basicAPPRIS ALT2TSL:1
NUP214-208ENST00000483497.63275916aaENSP00000436793.1
 
Protein coding
CCDS83430B7ZAV2 -GENCODE basicTSL:2
NUP214-232ENST00000652454.165372078aaENSP00000499001.1
 
Protein coding
-A0A494C1F2 -GENCODE basicAPPRIS ALT2
NUP214-203ENST00000451030.550211519aaENSP00000405014.2
 
Protein coding
-A0A0A0MSW3 -GENCODE basicTSL:1
NUP214-229ENST00000651022.12160720aaENSP00000498226.1
 
Protein coding
-A0A494BZU9 -CDS 5' and 3' incomplete
NUP214-226ENST00000531600.11775495aaENSP00000435364.1
 
Protein coding
-E9PKD2 -TSL:2CDS 3' incomplete
NUP214-231ENST00000651639.1907187aaENSP00000498545.1
 
Protein coding
-A0A494C0J0 -CDS 3' incomplete
NUP214-230ENST00000651334.1609203aaENSP00000498792.1
 
Protein coding
-A0A494C104 -CDS 5' and 3' incomplete
NUP214-224ENST00000530863.1560187aaENSP00000434223.1
 
Protein coding
-H0YDS4 -TSL:5CDS 5' and 3' incomplete
NUP214-225ENST00000531584.154552aaENSP00000435874.1
 
Protein coding
-E9PS86 -TSL:4CDS 3' incomplete
NUP214-207ENST00000476004.5502145aaENSP00000433606.1
 
Protein coding
-H0YDH2 -TSL:3CDS 5' incomplete
NUP214-219ENST00000528406.139378aaENSP00000433654.1
 
Protein coding
-H0YDI2 -TSL:3CDS 5' incomplete
NUP214-211ENST00000498010.2388113aaENSP00000435583.1
 
Protein coding
-H0YED3 -TSL:5CDS 5' incomplete
NUP214-204ENST00000453861.63208967aaENSP00000416934.2
 
Nonsense mediated decay
-H0Y837 -TSL:5CDS 5' incomplete
NUP214-228ENST00000650694.11655437aaENSP00000498774.1
 
Nonsense mediated decay
-A0A494C0Y1 -CDS 5' incomplete
NUP214-216ENST00000526346.5577140aaENSP00000437139.1
 
Nonsense mediated decay
-H0YF36 -TSL:4CDS 5' incomplete
NUP214-205ENST00000465486.61068No protein-
 
Processed transcript
---TSL:1
NUP214-206ENST00000470765.5620No protein-
 
Processed transcript
---TSL:5
NUP214-227ENST00000531929.5593No protein-
 
Processed transcript
---TSL:4
NUP214-218ENST00000528114.1575No protein-
 
Processed transcript
---TSL:4
NUP214-217ENST00000526412.1551No protein-
 
Processed transcript
---TSL:5
NUP214-222ENST00000530630.1536No protein-
 
Processed transcript
---TSL:3
NUP214-220ENST00000529286.1493No protein-
 
Processed transcript
---TSL:3
NUP214-223ENST00000530843.1189No protein-
 
Processed transcript
---TSL:5
NUP214-210ENST00000496921.22977No protein-
 
Retained intron
---TSL:1
NUP214-215ENST00000525980.52274No protein-
 
Retained intron
---TSL:2
NUP214-213ENST00000525384.1840No protein-
 
Retained intron
---TSL:1
NUP214-209ENST00000489260.1649No protein-
 
Retained intron
---TSL:3
NUP214-212ENST00000524578.5524No protein-
 
Retained intron
---TSL:3
NUP214-221ENST00000530491.1502No protein-
 
Retained intron
---TSL:3
NUP214-214ENST00000525561.1487No protein-
 
Retained intron
---TSL:4
Description

IKAROS family zinc finger 5 [Source:MGI Symbol;Acc:MGI:1914393]

Gene Synonyms

2610034F18Rik, Zfpn1a5

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Ikzf5-201ENSMUST00000046306.154430419aaENSMUSP00000035583.9
 
Protein coding
CCDS21915Q8BU00-1 GENCODE basicAPPRIS P1TSL:1
Ikzf5-202ENSMUST00000121033.82231266aaENSMUSP00000113714.2
 
Protein coding
-Q8BU00-3 GENCODE basicTSL:1
Ikzf5-203ENSMUST00000128432.3714107aaENSMUSP00000139528.2
 
Protein coding
-A0A087WNW9 GENCODE basicTSL:3
Ikzf5-206ENSMUST00000207243.2526129aaENSMUSP00000146590.2
 
Protein coding
-A0A140LHX6 TSL:3CDS 3' incomplete
Ikzf5-205ENSMUST00000154602.8487123aaENSMUSP00000123530.2
 
Protein coding
-D3YYG0 TSL:3CDS 3' incomplete
Ikzf5-204ENSMUST00000142349.327820aaENSMUSP00000117823.2
 
Protein coding
-D3YVZ8 TSL:5CDS 3' incomplete
Ikzf5-207ENSMUST00000208966.22470No protein-
 
Retained intron
--TSL:NA
Description

nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]

Gene Synonyms

MGC23410, MGC8688, NAP1, NAP1L, NRP

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
NAP1L1-226ENST00000618691.513159391aaENSP00000477538.1
 
Protein coding
CCDS9013P55209-1 NM_004537.7MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
NAP1L1-209ENST00000547773.51967328aaENSP00000448167.1
 
Protein coding
CCDS81715F8W543 -GENCODE basicTSL:5
NAP1L1-201ENST00000393263.71896391aaENSP00000376947.3
 
Protein coding
CCDS9013P55209-1 -GENCODE basicAPPRIS P4TSL:1
NAP1L1-203ENST00000535020.61686383aaENSP00000445008.2
 
Protein coding
CCDS76581F5H4R6 -GENCODE basicAPPRIS ALT1TSL:2
NAP1L1-202ENST00000431879.72031323aaENSP00000409795.3
 
Protein coding
-P55209-3 -GENCODE basicTSL:2
NAP1L1-223ENST00000552056.51981385aaENSP00000450236.1
 
Protein coding
-H0YIV4 -TSL:5CDS 5' incomplete
NAP1L1-215ENST00000549596.51838368aaENSP00000447793.1
 
Protein coding
-P55209-2 -GENCODE basicTSL:2
NAP1L1-204ENST00000542344.51675349aaENSP00000444759.1
 
Protein coding
-B7Z9C2 -GENCODE basicTSL:2
NAP1L1-205ENST00000544816.51597208aaENSP00000437507.1
 
Protein coding
-B7Z4K9 -GENCODE basicTSL:2
NAP1L1-225ENST00000552342.51526379aaENSP00000447196.1
 
Protein coding
-F8W0J6 -GENCODE basicTSL:5
NAP1L1-212ENST00000548044.51339327aaENSP00000449649.1
 
Protein coding
-F8VV59 -GENCODE basicTSL:5
NAP1L1-221ENST00000551992.51074264aaENSP00000448764.1
 
Protein coding
-F8VY35 -TSL:5CDS 3' incomplete
NAP1L1-217ENST00000550934.5851237aaENSP00000448133.1
 
Protein coding
-F8VUX1 -TSL:5CDS 3' incomplete
NAP1L1-213ENST00000548273.5818209aaENSP00000446787.1
 
Protein coding
-F8W118 -TSL:3CDS 3' incomplete
NAP1L1-220ENST00000551600.5786215aaENSP00000448836.1
 
Protein coding
-F8VXI6 -TSL:5CDS 3' incomplete
NAP1L1-208ENST00000547704.5760207aaENSP00000446756.1
 
Protein coding
-F8W020 -TSL:5CDS 3' incomplete
NAP1L1-206ENST00000547479.5623161aaENSP00000449333.1
 
Protein coding
-F8VVB5 -TSL:5CDS 3' incomplete
NAP1L1-219ENST00000551524.5460114aaENSP00000448661.1
 
Protein coding
-F8VRJ2 -TSL:2CDS 3' incomplete
NAP1L1-224ENST00000552147.51009198aaENSP00000446804.1
 
Nonsense mediated decay
-H0YHC3 -TSL:5CDS 5' incomplete
NAP1L1-207ENST00000547529.6892177aaENSP00000446520.1
 
Nonsense mediated decay
-H0YH88 -TSL:5CDS 5' incomplete
NAP1L1-211ENST00000547993.52481No protein-
 
Retained intron
---TSL:1
NAP1L1-222ENST00000552013.1679No protein-
 
Retained intron
---TSL:2
NAP1L1-214ENST00000549479.1573No protein-
 
Retained intron
---TSL:2
NAP1L1-218ENST00000551500.1552No protein-
 
Retained intron
---TSL:1
NAP1L1-216ENST00000549988.5544No protein-
 
Retained intron
---TSL:3
NAP1L1-210ENST00000547969.5543No protein-
 
Retained intron
---TSL:4
Description

RIKEN cDNA 4932438A13 gene [Source:MGI Symbol;Acc:MGI:2444631]

Gene Synonyms

FSA, Tweek

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
4932438A13Rik-201ENSMUST00000057272.15158835005aaENSMUSP00000060199.9
 
Protein coding
CCDS50894A2AAE1-1 GENCODE basicAPPRIS P1TSL:5
4932438A13Rik-217ENSMUST00000152564.8155415005aaENSMUSP00000117808.2
 
Protein coding
CCDS50894A2AAE1-1 GENCODE basicAPPRIS P1TSL:5
4932438A13Rik-223ENSMUST00000211820.285942864aaENSMUSP00000148720.2
 
Protein coding
-A0A1D5RMC4 TSL:5CDS 3' incomplete
4932438A13Rik-215ENSMUST00000146948.856101711aaENSMUSP00000121356.2
 
Protein coding
-F6RPM4 TSL:5CDS 5' incomplete
4932438A13Rik-213ENSMUST00000141740.852361586aaENSMUSP00000117814.2
 
Protein coding
-F6YAT5 TSL:1CDS 5' incomplete
4932438A13Rik-210ENSMUST00000138950.849981507aaENSMUSP00000118092.2
 
Protein coding
-A2AB97 TSL:5CDS 5' incomplete
4932438A13Rik-209ENSMUST00000138152.2681227aaENSMUSP00000117809.2
 
Protein coding
-F6YB09 TSL:3CDS 5' and 3' incomplete
4932438A13Rik-218ENSMUST00000152881.84658329aaENSMUSP00000118366.2
 
Nonsense mediated decay
-D6RI50 TSL:1
4932438A13Rik-204ENSMUST00000128061.22945243aaENSMUSP00000116345.2
 
Nonsense mediated decay
-F6Q4Y5 TSL:5CDS 5' incomplete
4932438A13Rik-216ENSMUST00000148698.24301No protein-
 
Retained intron
--TSL:1
4932438A13Rik-212ENSMUST00000140480.24172No protein-
 
Retained intron
--TSL:1
4932438A13Rik-203ENSMUST00000123916.83958No protein-
 
Retained intron
--TSL:1
4932438A13Rik-219ENSMUST00000195933.23906No protein-
 
Retained intron
--TSL:NA
4932438A13Rik-221ENSMUST00000198742.53599No protein-
 
Retained intron
--TSL:1
4932438A13Rik-202ENSMUST00000108145.93551No protein-
 
Retained intron
--TSL:1
4932438A13Rik-220ENSMUST00000196036.22750No protein-
 
Retained intron
--TSL:NA
4932438A13Rik-208ENSMUST00000136746.22441No protein-
 
Retained intron
--TSL:1
4932438A13Rik-222ENSMUST00000200245.22413No protein-
 
Retained intron
--TSL:NA
4932438A13Rik-207ENSMUST00000136287.82327No protein-
 
Retained intron
--TSL:1
4932438A13Rik-205ENSMUST00000129721.22022No protein-
 
Retained intron
--TSL:1
4932438A13Rik-211ENSMUST00000139219.2695No protein-
 
Retained intron
--TSL:2
4932438A13Rik-214ENSMUST00000143675.2650No protein-
 
Retained intron
--TSL:3
4932438A13Rik-206ENSMUST00000129787.2332No protein-
 
Retained intron
--TSL:3
Description

TANK binding kinase 1 [Source:HGNC Symbol;Acc:HGNC:11584]

Gene Synonyms

NAK

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
TBK1-201ENST00000331710.103022729aaENSP00000329967.5
 
Protein coding
CCDS8968Q9UHD2 NM_013254.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
TBK1-212ENST00000650790.13006729aaENSP00000498995.1
 
Protein coding
CCDS8968Q9UHD2 -GENCODE basicAPPRIS P2
TBK1-214ENST00000651014.13046677aaENSP00000498885.1
 
Protein coding
-A0A494C167 -GENCODE basic
TBK1-246ENST00000677641.13001728aaENSP00000504637.1
 
Protein coding
---GENCODE basicAPPRIS ALT1
TBK1-245ENST00000677632.12959724aaENSP00000504586.1
 
Protein coding
---GENCODE basic
TBK1-234ENST00000676912.12956677aaENSP00000503567.1
 
Protein coding
---GENCODE basic
TBK1-221ENST00000652657.12944705aaENSP00000498887.1
 
Protein coding
-A0A494C148 -GENCODE basic
TBK1-256ENST00000678180.12869695aaENSP00000504132.1
 
Protein coding
---GENCODE basic
TBK1-235ENST00000676930.12649613aaENSP00000502899.1
 
Protein coding
---GENCODE basic
TBK1-210ENST00000650762.12459643aaENSP00000498758.1
 
Protein coding
-A0A494C0X2 -GENCODE basic
TBK1-228ENST00000676593.187743aaENSP00000503458.1
 
Protein coding
---CDS 5' incomplete
TBK1-227ENST00000676587.186440aaENSP00000504858.1
 
Protein coding
---CDS 5' incomplete
TBK1-203ENST00000538890.5547103aaENSP00000445834.1
 
Protein coding
-F5H1A3 -TSL:4CDS 3' incomplete
TBK1-205ENST00000540417.151398aaENSP00000445628.1
 
Protein coding
-F5H206 -TSL:4CDS 3' incomplete
TBK1-259ENST00000678368.148429aaENSP00000504296.1
 
Protein coding
---CDS 3' incomplete
TBK1-204ENST00000539810.141948aaENSP00000444428.1
 
Protein coding
-F5GZI4 -TSL:3CDS 3' incomplete
TBK1-236ENST00000676983.1308103aaENSP00000503561.1
 
Protein coding
---CDS 5' and 3' incomplete
TBK1-222ENST00000676469.124872aaENSP00000503155.1
 
Protein coding
---CDS 3' incomplete
TBK1-254ENST00000678079.123478aaENSP00000503613.1
 
Protein coding
---CDS 5' and 3' incomplete
TBK1-243ENST00000677545.120924aaENSP00000504729.1
 
Protein coding
---CDS 3' incomplete
TBK1-255ENST00000678125.111137aaENSP00000504253.1
 
Protein coding
---CDS 5' and 3' incomplete
TBK1-232ENST00000676809.13273511aaENSP00000504298.1
 
Nonsense mediated decay
----
TBK1-211ENST00000650786.1324440aaENSP00000498280.1
 
Nonsense mediated decay
-A0A494BZY3 --
TBK1-213ENST00000650997.13178731aaENSP00000498341.1
 
Nonsense mediated decay
-A0A494C045 --
TBK1-216ENST00000651878.13151240aaENSP00000499077.1
 
Nonsense mediated decay
-A0A494C1I2 --
TBK1-242ENST00000677499.13108575aaENSP00000502875.1
 
Nonsense mediated decay
----
TBK1-220ENST00000652537.13092575aaENSP00000499102.1
 
Nonsense mediated decay
-A0A494C1M6 --
TBK1-251ENST00000677831.12960541aaENSP00000503760.1
 
Nonsense mediated decay
----
TBK1-215ENST00000651262.12902551aaENSP00000498461.1
 
Nonsense mediated decay
-A0A494C0A8 --
TBK1-209ENST00000650708.12751542aaENSP00000498667.1
 
Nonsense mediated decay
-A0A494C0R4 -CDS 5' incomplete
TBK1-219ENST00000652389.12285519aaENSP00000498414.1
 
Nonsense mediated decay
-A0A494C079 --
TBK1-240ENST00000677313.1100830aaENSP00000503363.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-264ENST00000678738.187586aaENSP00000503263.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-237ENST00000677016.175786aaENSP00000504578.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-238ENST00000677112.159563aaENSP00000504208.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-250ENST00000677759.155886aaENSP00000503847.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-261ENST00000678567.150990aaENSP00000504755.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-269ENST00000679050.150250aaENSP00000503595.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-263ENST00000678718.147879aaENSP00000504038.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-253ENST00000677973.147362aaENSP00000503248.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-271ENST00000679302.146945aaENSP00000503553.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-265ENST00000678808.144364aaENSP00000503260.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-223ENST00000676490.143877aaENSP00000503569.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-224ENST00000676521.143364aaENSP00000503000.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-207ENST00000545025.237144aaENSP00000504046.1
 
Nonsense mediated decay
---TSL:2CDS 5' incomplete
TBK1-262ENST00000678582.135736aaENSP00000504002.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-252ENST00000677858.131247aaENSP00000502994.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-241ENST00000677435.130142aaENSP00000504836.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-225ENST00000676539.130040aaENSP00000504315.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-267ENST00000678996.123841aaENSP00000503169.1
 
Nonsense mediated decay
---CDS 5' incomplete
TBK1-218ENST00000651947.11786No protein-
 
Processed transcript
----
TBK1-266ENST00000678992.1756No protein-
 
Processed transcript
----
TBK1-233ENST00000676901.1232No protein-
 
Processed transcript
----
TBK1-258ENST00000678235.1210No protein-
 
Processed transcript
----
TBK1-239ENST00000677242.1191No protein-
 
Processed transcript
----
TBK1-247ENST00000677670.1145No protein-
 
Processed transcript
----
TBK1-249ENST00000677714.160No protein-
 
Processed transcript
----
TBK1-248ENST00000677686.15944No protein-
 
Retained intron
----
TBK1-230ENST00000676684.13629No protein-
 
Retained intron
----
TBK1-229ENST00000676654.13204No protein-
 
Retained intron
----
TBK1-257ENST00000678197.12906No protein-
 
Retained intron
----
TBK1-226ENST00000676551.12331No protein-
 
Retained intron
----
TBK1-244ENST00000677549.11987No protein-
 
Retained intron
----
TBK1-208ENST00000545392.21781No protein-
 
Retained intron
---TSL:3
TBK1-217ENST00000651889.11573No protein-
 
Retained intron
----
TBK1-206ENST00000541805.21380No protein-
 
Retained intron
---TSL:3
TBK1-260ENST00000678430.11261No protein-
 
Retained intron
----
TBK1-231ENST00000676774.11160No protein-
 
Retained intron
----
TBK1-270ENST00000679065.11075No protein-
 
Retained intron
----
TBK1-268ENST00000679010.1957No protein-
 
Retained intron
----
TBK1-202ENST00000536906.1756No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 2, Coding exons: 0, Transcript length: 210 bps,

Version

ENST00000678235.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x37bfb998)