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EnsemblEnsembl Home
Description

FTX transcript, XIST regulator [Source:HGNC Symbol;Acc:HGNC:37190]

Gene Synonyms

FLJ33139, LINC00182, MIR374AHG, NCRNA00182

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
FTX-204ENST00000430772.6919No protein-
 
lncRNA
--Ensembl CanonicalTSL:5
FTX-214ENST00000638437.112267No protein-
 
lncRNA
--GENCODE basicTSL:5
FTX-217ENST00000639539.111469No protein-
 
lncRNA
--TSL:5
FTX-213ENST00000638232.111246No protein-
 
lncRNA
--TSL:5
FTX-215ENST00000638681.19771No protein-
 
lncRNA
--GENCODE basicTSL:5
FTX-210ENST00000603037.28347No protein-
 
lncRNA
--GENCODE basicTSL:5
FTX-222ENST00000651703.14158No protein-
 
lncRNA
---
FTX-220ENST00000651392.14008No protein-
 
lncRNA
---
FTX-218ENST00000641360.13897No protein-
 
lncRNA
---
FTX-239ENST00000656041.13400No protein-
 
lncRNA
---
FTX-242ENST00000657327.13307No protein-
 
lncRNA
--GENCODE basic
FTX-230ENST00000652527.12849No protein-
 
lncRNA
--GENCODE basic
FTX-260ENST00000662864.12838No protein-
 
lncRNA
---
FTX-203ENST00000429124.62778No protein-
 
lncRNA
--TSL:2
FTX-258ENST00000662240.12728No protein-
 
lncRNA
---
FTX-252ENST00000660224.12697No protein-
 
lncRNA
---
FTX-262ENST00000664343.12690No protein-
 
lncRNA
---
FTX-267ENST00000668224.12519No protein-
 
lncRNA
---
FTX-268ENST00000669263.12488No protein-
 
lncRNA
---
FTX-209ENST00000602812.62359No protein-
 
lncRNA
--TSL:1
FTX-232ENST00000652609.12334No protein-
 
lncRNA
--GENCODE basic
FTX-221ENST00000651451.12322No protein-
 
lncRNA
---
FTX-231ENST00000652540.12304No protein-
 
lncRNA
---
FTX-266ENST00000666535.12179No protein-
 
lncRNA
---
FTX-243ENST00000657611.12143No protein-
 
lncRNA
---
FTX-226ENST00000652319.12137No protein-
 
lncRNA
--GENCODE basic
FTX-202ENST00000423992.31997No protein-
 
lncRNA
--TSL:5
FTX-228ENST00000652331.21996No protein-
 
lncRNA
---
FTX-245ENST00000658439.11980No protein-
 
lncRNA
---
FTX-229ENST00000652496.11973No protein-
 
lncRNA
---
FTX-225ENST00000652071.11964No protein-
 
lncRNA
---
FTX-264ENST00000665069.11958No protein-
 
lncRNA
---
FTX-238ENST00000654870.11950No protein-
 
lncRNA
---
FTX-261ENST00000664123.11925No protein-
 
lncRNA
---
FTX-257ENST00000661335.11909No protein-
 
lncRNA
---
FTX-236ENST00000653874.11877No protein-
 
lncRNA
---
FTX-256ENST00000661133.11850No protein-
 
lncRNA
---
FTX-233ENST00000652970.11796No protein-
 
lncRNA
---
FTX-265ENST00000665313.11790No protein-
 
lncRNA
---
FTX-223ENST00000651936.11768No protein-
 
lncRNA
---
FTX-241ENST00000657070.11757No protein-
 
lncRNA
---
FTX-253ENST00000660481.11663No protein-
 
lncRNA
---
FTX-237ENST00000654373.11662No protein-
 
lncRNA
---
FTX-271ENST00000671343.11658No protein-
 
lncRNA
---
FTX-247ENST00000659012.11630No protein-
 
lncRNA
---
FTX-240ENST00000656977.11627No protein-
 
lncRNA
---
FTX-219ENST00000651140.11618No protein-
 
lncRNA
---
FTX-224ENST00000652013.11578No protein-
 
lncRNA
---
FTX-248ENST00000659390.11556No protein-
 
lncRNA
---
FTX-263ENST00000664803.11529No protein-
 
lncRNA
---
FTX-234ENST00000653018.11486No protein-
 
lncRNA
---
FTX-270ENST00000671067.11477No protein-
 
lncRNA
---
FTX-205ENST00000455395.61435No protein-
 
lncRNA
--TSL:3
FTX-250ENST00000659574.11414No protein-
 
lncRNA
---
FTX-249ENST00000659407.11411No protein-
 
lncRNA
---
FTX-216ENST00000638985.11367No protein-
 
lncRNA
--GENCODE basicTSL:5
FTX-254ENST00000660829.11358No protein-
 
lncRNA
--GENCODE basic
FTX-255ENST00000661084.11328No protein-
 
lncRNA
---
FTX-251ENST00000660100.11262No protein-
 
lncRNA
---
FTX-206ENST00000602420.61246No protein-
 
lncRNA
--TSL:3
FTX-259ENST00000662494.11232No protein-
 
lncRNA
---
FTX-235ENST00000653390.11230No protein-
 
lncRNA
---
FTX-269ENST00000670936.11137No protein-
 
lncRNA
---
FTX-246ENST00000658448.11136No protein-
 
lncRNA
---
FTX-272ENST00000671385.11111No protein-
 
lncRNA
---
FTX-244ENST00000658203.11097No protein-
 
lncRNA
---
FTX-211ENST00000603672.51077No protein-
 
lncRNA
--TSL:5
FTX-212ENST00000603952.1905No protein-
 
lncRNA
--TSL:3
FTX-208ENST00000602776.6827No protein-
 
lncRNA
--TSL:4
FTX-201ENST00000418855.6745No protein-
 
lncRNA
--TSL:2
FTX-227ENST00000652327.1583No protein-
 
lncRNA
---
FTX-207ENST00000602576.5574No protein-
 
lncRNA
--TSL:4
Description

heterogeneous nuclear ribonucleoprotein A1 [Source:HGNC Symbol;Acc:HGNC:5031]

Gene Synonyms

ALS20, HNRPA1, hnRNP-A1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
HNRNPA1-202ENST00000340913.113744372aaENSP00000341826.7
 
Protein coding
CCDS44909P09651-1 NM_031157.4MANE Select v0.93Ensembl CanonicalGENCODE basicTSL:1
HNRNPA1-203ENST00000546500.54121320aaENSP00000448617.1
 
Protein coding
CCDS41793P09651-2 -GENCODE basicAPPRIS P1TSL:1
HNRNPA1-231ENST00000677210.12793372aaENSP00000503610.1
 
Protein coding
CCDS44909A0A024RAZ7 -GENCODE basic
HNRNPA1-209ENST00000550482.22596320aaENSP00000446486.2
 
Protein coding
CCDS41793A0A024RB53 H0YH80 -GENCODE basicAPPRIS P1TSL:2
HNRNPA1-238ENST00000677385.13999242aaENSP00000502985.1
 
Protein coding
---GENCODE basic
HNRNPA1-234ENST00000677249.12278319aaENSP00000503649.1
 
Protein coding
---GENCODE basic
HNRNPA1-250ENST00000678077.12067275aaENSP00000504814.1
 
Protein coding
---GENCODE basic
HNRNPA1-237ENST00000677375.11811326aaENSP00000503651.1
 
Protein coding
---GENCODE basic
HNRNPA1-204ENST00000547276.51539267aaENSP00000447260.1
 
Protein coding
-P09651-3 -GENCODE basicTSL:1
HNRNPA1-201ENST00000330752.121294307aaENSP00000333504.8
 
Protein coding
-F8W6I7 -GENCODE basicTSL:5
HNRNPA1-208ENST00000548688.5711231aaENSP00000447782.1
 
Protein coding
-F8VZ49 -TSL:3CDS 3' incomplete
HNRNPA1-206ENST00000547708.5530156aaENSP00000448229.1
 
Protein coding
-F8W646 -TSL:4CDS 3' incomplete
HNRNPA1-213ENST00000551702.5481145aaENSP00000448117.1
 
Protein coding
-F8VTQ5 -TSL:3CDS 3' incomplete
HNRNPA1-279ENST00000679101.139448aaENSP00000503166.1
 
Protein coding
---CDS 3' incomplete
HNRNPA1-247ENST00000677840.1362108aaENSP00000503273.1
 
Protein coding
---CDS 5' incomplete
HNRNPA1-227ENST00000676951.1312104aaENSP00000502981.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-266ENST00000678611.129799aaENSP00000504004.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-275ENST00000678970.129287aaENSP00000503825.1
 
Protein coding
---CDS 5' incomplete
HNRNPA1-223ENST00000676853.129197aaENSP00000503749.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-264ENST00000678581.129197aaENSP00000504251.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-260ENST00000678424.128896aaENSP00000503030.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-245ENST00000677778.128181aaENSP00000504642.1
 
Protein coding
---CDS 5' incomplete
HNRNPA1-278ENST00000679079.127756aaENSP00000504545.1
 
Protein coding
---CDS 5' incomplete
HNRNPA1-276ENST00000679026.127756aaENSP00000504539.1
 
Protein coding
---CDS 5' incomplete
HNRNPA1-221ENST00000676794.126445aaENSP00000504819.1
 
Protein coding
---GENCODE basic
HNRNPA1-272ENST00000678919.125475aaENSP00000504604.1
 
Protein coding
---CDS 3' incomplete
HNRNPA1-243ENST00000677645.124983aaENSP00000504753.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-242ENST00000677636.124983aaENSP00000503254.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-256ENST00000678347.124983aaENSP00000504511.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-270ENST00000678876.124983aaENSP00000503756.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-249ENST00000677945.123478aaENSP00000503056.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-269ENST00000678873.123177aaENSP00000503516.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-277ENST00000679063.123177aaENSP00000504683.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-258ENST00000678412.121670aaENSP00000503562.1
 
Protein coding
---CDS 5' incomplete
HNRNPA1-273ENST00000678934.121070aaENSP00000504850.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-219ENST00000676707.121070aaENSP00000504696.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-244ENST00000677666.119618aaENSP00000504664.1
 
Protein coding
---CDS 5' incomplete
HNRNPA1-215ENST00000676472.119565aaENSP00000503977.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-268ENST00000678690.119054aaENSP00000503229.1
 
Protein coding
---CDS 3' incomplete
HNRNPA1-263ENST00000678513.118361aaENSP00000503162.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-265ENST00000678597.118060aaENSP00000504089.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-236ENST00000677291.116856aaENSP00000504458.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-233ENST00000677224.116555aaENSP00000502876.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-235ENST00000677279.116254aaENSP00000503602.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-225ENST00000676886.114446aaENSP00000503468.1
 
Protein coding
---CDS 5' incomplete
HNRNPA1-262ENST00000678456.113543aaENSP00000504368.1
 
Protein coding
---CDS 5' incomplete
HNRNPA1-240ENST00000677518.112642aaENSP00000503537.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-248ENST00000677847.19632aaENSP00000503848.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-274ENST00000678947.14214aaENSP00000503733.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-239ENST00000677488.13612aaENSP00000504431.1
 
Protein coding
---CDS 5' and 3' incomplete
HNRNPA1-205ENST00000547566.51234320aaENSP00000449913.1
 
Nonsense mediated decay
CCDS41793P09651-2 -TSL:1
HNRNPA1-222ENST00000676842.148953aaENSP00000504036.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-230ENST00000677191.146367aaENSP00000503128.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-210ENST00000550994.245569aaENSP00000448917.2
 
Nonsense mediated decay
-F8VYN5 -TSL:4CDS 5' incomplete
HNRNPA1-241ENST00000677539.144532aaENSP00000504506.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-217ENST00000676572.134932aaENSP00000503865.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-232ENST00000677220.133849aaENSP00000502987.1
 
Nonsense mediated decay
----
HNRNPA1-284ENST00000679344.132428aaENSP00000504058.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-261ENST00000678448.131558aaENSP00000503619.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-254ENST00000678212.131131aaENSP00000503276.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-282ENST00000679273.130354aaENSP00000504626.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-253ENST00000678199.129318aaENSP00000504143.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-218ENST00000676661.127118aaENSP00000503829.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-226ENST00000676925.127018aaENSP00000504344.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-229ENST00000677072.126718aaENSP00000502915.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-246ENST00000677832.125918aaENSP00000503861.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-228ENST00000677061.124918aaENSP00000503520.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-281ENST00000679251.121518aaENSP00000502904.1
 
Nonsense mediated decay
---CDS 5' incomplete
HNRNPA1-214ENST00000551803.1372No protein-
 
Processed transcript
---TSL:3
HNRNPA1-252ENST00000678103.1242No protein-
 
Processed transcript
----
HNRNPA1-271ENST00000678900.1163No protein-
 
Processed transcript
----
HNRNPA1-255ENST00000678279.1142No protein-
 
Processed transcript
----
HNRNPA1-257ENST00000678365.1119No protein-
 
Processed transcript
----
HNRNPA1-224ENST00000676855.1111No protein-
 
Processed transcript
----
HNRNPA1-283ENST00000679319.1105No protein-
 
Processed transcript
----
HNRNPA1-216ENST00000676528.1105No protein-
 
Processed transcript
----
HNRNPA1-267ENST00000678687.1102No protein-
 
Processed transcript
----
HNRNPA1-251ENST00000678093.189No protein-
 
Processed transcript
----
HNRNPA1-280ENST00000679228.12515No protein-
 
Retained intron
----
HNRNPA1-259ENST00000678418.12008No protein-
 
Retained intron
----
HNRNPA1-220ENST00000676725.11987No protein-
 
Retained intron
----
HNRNPA1-207ENST00000547870.21610No protein-
 
Retained intron
---TSL:3
HNRNPA1-211ENST00000551665.1925No protein-
 
Retained intron
---TSL:2
HNRNPA1-212ENST00000551679.1359No protein-
 
Retained intron
---TSL:2
Description

cholinergic receptor, nicotinic, alpha polypeptide 9 [Source:MGI Symbol;Acc:MGI:1202403]

Gene Synonyms

2410015I05Rik, Acra9, Gm8311

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Chrna9-201ENSMUST00000031108.91843479aaENSMUSP00000031108.7
 
Protein coding
CCDS39101G3X8Z7 GENCODE basicAPPRIS P1TSL:1
Chrna9-204ENSMUST00000201814.4831258aaENSMUSP00000144364.2
 
Protein coding
-A0A0J9YUW0 TSL:3CDS 3' incomplete
Chrna9-207ENSMUST00000202957.240116aaENSMUSP00000144147.2
 
Protein coding
-D3Z2J9 TSL:3CDS 3' incomplete
Chrna9-203ENSMUST00000201664.2550No protein-
 
Processed transcript
--TSL:3
Chrna9-205ENSMUST00000202234.2501No protein-
 
Processed transcript
--TSL:1
Chrna9-206ENSMUST00000202735.2318No protein-
 
Processed transcript
--TSL:2
Chrna9-202ENSMUST00000200881.2600No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,843 bps, Translation length: 479 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39101

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000031108.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x253431f8)