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EnsemblEnsembl Home
Description

DEP domain containing 5, GATOR1 subcomplex subunit [Source:HGNC Symbol;Acc:HGNC:18423]

Gene Synonyms

DEP.5, KIAA0645

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000651528.2DEPDC5-26465541603aaENSP00000498382.1
 
Protein coding
CCDS74849O75140-10 NM_001242896.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1
ENST00000642696.1DEPDC5-22664791572aaENSP00000495917.1
 
Protein coding
CCDS43006O75140-1 -GENCODE basicAPPRIS P3
ENST00000645711.1DEPDC5-24854501594aaENSP00000493489.1
 
Protein coding
CCDS46692O75140-9 -GENCODE basicAPPRIS ALT1
ENST00000382112.8DEPDC5-20253901603aaENSP00000371546.4
 
Protein coding
CCDS74849O75140-10 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000644331.1DEPDC5-23953831581aaENSP00000494406.1
 
Protein coding
CCDS87017O75140-4 -GENCODE basicAPPRIS ALT1
ENST00000400249.7DEPDC5-20653501581aaENSP00000383108.3
 
Protein coding
CCDS87017O75140-4 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000400248.7DEPDC5-20553191572aaENSP00000383107.1
 
Protein coding
CCDS43006O75140-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000646969.1DEPDC5-25952861525aaENSP00000496724.1
 
Protein coding
CCDS87018A0A2R8Y6H3 -GENCODE basic
ENST00000645560.1DEPDC5-24552071525aaENSP00000495544.1
 
Protein coding
CCDS87018A0A2R8Y6H3 -GENCODE basic
ENST00000535622.6DEPDC5-22151971503aaENSP00000440210.1
 
Protein coding
CCDS56229O75140-8 -GENCODE basicTSL:2
ENST00000400242.8DEPDC5-2032448559aaENSP00000383101.3
 
Protein coding
CCDS43007O75140-2 -GENCODE basicTSL:1
ENST00000646755.1DEPDC5-2572317559aaENSP00000496532.1
 
Protein coding
CCDS43007O75140-2 -GENCODE basic
ENST00000433147.2DEPDC5-20753311575aaENSP00000410544.2
 
Protein coding
-H0Y770 -GENCODE basicTSL:1
ENST00000646465.1DEPDC5-25552581496aaENSP00000495655.1
 
Protein coding
-A0A2R8Y721 -GENCODE basic
ENST00000382111.6DEPDC5-20152121552aaENSP00000371545.2
 
Protein coding
-O75140-5 -GENCODE basicTSL:5
ENST00000645407.1DEPDC5-24250101589aaENSP00000496252.1
 
Protein coding
-A0A2R8Y7U0 -GENCODE basic
ENST00000647343.1DEPDC5-26246641484aaENSP00000494879.1
 
Protein coding
-A0A2R8Y5K9 -CDS 3' incomplete
ENST00000642974.1DEPDC5-2302682829aaENSP00000496395.1
 
Protein coding
-A0A2R8Y7U6 -GENCODE basic
ENST00000645564.1DEPDC5-2462542795aaENSP00000494484.1
 
Protein coding
-A0A2R8Y5E9 -CDS 3' incomplete
ENST00000645693.1DEPDC5-2472403748aaENSP00000496281.1
 
Protein coding
-A0A2R8YF97 -CDS 3' incomplete
ENST00000647438.1DEPDC5-2632221531aaENSP00000494714.1
 
Protein coding
-A0A2R8Y5P2 -GENCODE basic
ENST00000437411.6DEPDC5-2081478193aaENSP00000416314.2
 
Protein coding
-C9JGS4 -GENCODE basicTSL:5
ENST00000645015.1DEPDC5-2411278193aaENSP00000494299.1
 
Protein coding
-C9JGS4 -GENCODE basic
ENST00000458532.2DEPDC5-211914135aaENSP00000412057.2
 
Protein coding
-H7C3I3 -TSL:5CDS 5' incomplete
ENST00000456178.6DEPDC5-21054937aaENSP00000405351.2
 
Protein coding
-F8WAX3 -TSL:5CDS 3' incomplete
ENST00000473802.1DEPDC5-21650348aaENSP00000494372.1
 
Protein coding
-A0A2R8YEI8 -TSL:3CDS 3' incomplete
ENST00000497340.1DEPDC5-22028830aaENSP00000496596.1
 
Protein coding
-A0A2R8Y7X0 -TSL:5CDS 5' incomplete
ENST00000400246.7DEPDC5-20457251343aaENSP00000383105.3
 
Nonsense mediated decay
-A0A5F9UWT1 -TSL:1
ENST00000646515.1DEPDC5-25654721198aaENSP00000494700.1
 
Nonsense mediated decay
-A0A2R8Y5T1 --
ENST00000642684.1DEPDC5-225541095aaENSP00000494554.1
 
Nonsense mediated decay
-A0A2R8YET0 --
ENST00000645494.1DEPDC5-2435371638aaENSP00000495338.1
 
Nonsense mediated decay
-A0A2R8Y6H8 --
ENST00000646998.1DEPDC5-26053021285aaENSP00000494662.1
 
Nonsense mediated decay
-A0A2R8YEW8 --
ENST00000642771.1DEPDC5-2275301638aaENSP00000496278.1
 
Nonsense mediated decay
-A0A2R8Y6H8 --
ENST00000644162.1DEPDC5-2385224405aaENSP00000495371.1
 
Nonsense mediated decay
-A0A2R8YFS1 --
ENST00000645755.1DEPDC5-2495214333aaENSP00000495873.1
 
Nonsense mediated decay
-A0A2R8Y6Y2 --
ENST00000643751.2DEPDC5-23650671187aaENSP00000495496.1
 
Nonsense mediated decay
-A0A2R8Y6V4 --
ENST00000643395.1DEPDC5-23547901207aaENSP00000496630.1
 
Nonsense mediated decay
-A0A2R8Y842 --
ENST00000448753.6DEPDC5-2093256659aaENSP00000402173.1
 
Nonsense mediated decay
-H7C1T0 -TSL:1CDS 5' incomplete
ENST00000645547.1DEPDC5-2442084228aaENSP00000496023.1
 
Nonsense mediated decay
-A0A2R8Y7C9 -CDS 5' incomplete
ENST00000645967.1DEPDC5-2521675153aaENSP00000495187.1
 
Nonsense mediated decay
-A0A2R8Y6F4 --
ENST00000469974.6DEPDC5-214880116aaENSP00000494860.1
 
Nonsense mediated decay
-A0A2R8Y5V3 -TSL:5CDS 5' incomplete
ENST00000643021.1DEPDC5-2312249No protein-
 
Processed transcript
----
ENST00000643097.1DEPDC5-2332211No protein-
 
Processed transcript
----
ENST00000644690.1DEPDC5-2402052No protein-
 
Processed transcript
----
ENST00000646830.1DEPDC5-2581518No protein-
 
Processed transcript
----
ENST00000494060.1DEPDC5-219750No protein-
 
Processed transcript
---TSL:5
ENST00000642551.1DEPDC5-2234516No protein-
 
Retained intron
----
ENST00000645893.1DEPDC5-2513375No protein-
 
Retained intron
----
ENST00000646135.1DEPDC5-2532776No protein-
 
Retained intron
----
ENST00000642212.1DEPDC5-2222624No protein-
 
Retained intron
----
ENST00000643166.1DEPDC5-2342300No protein-
 
Retained intron
----
ENST00000479261.2DEPDC5-2172173No protein-
 
Retained intron
---TSL:2
ENST00000646383.1DEPDC5-2542160No protein-
 
Retained intron
----
ENST00000647289.1DEPDC5-2612112No protein-
 
Retained intron
----
ENST00000642915.1DEPDC5-2282064No protein-
 
Retained intron
----
ENST00000643948.1DEPDC5-2371424No protein-
 
Retained intron
----
ENST00000642956.1DEPDC5-2291397No protein-
 
Retained intron
----
ENST00000642605.1DEPDC5-224741No protein-
 
Retained intron
----
ENST00000469969.2DEPDC5-213679No protein-
 
Retained intron
---TSL:5
ENST00000490731.1DEPDC5-218602No protein-
 
Retained intron
---TSL:4
ENST00000645785.1DEPDC5-250584No protein-
 
Retained intron
----
ENST00000471914.5DEPDC5-215569No protein-
 
Retained intron
---TSL:4
ENST00000643075.1DEPDC5-232356No protein-
 
Retained intron
----
ENST00000462414.1DEPDC5-212231No protein-
 
Retained intron
---TSL:5
Description

low density lipoprotein-related protein 12 [Source:MGI Symbol;Acc:MGI:2443132]

Gene Synonyms

C820005L12Rik

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000110305.3Lrp12-2024244839aaENSMUSP00000105934.3
 
Protein coding
CCDS84168Q8BUJ9-2 GENCODE basicTSL:1
ENSMUST00000022916.13Lrp12-2014109858aaENSMUSP00000022916.6
 
Protein coding
CCDS27446Q8BUJ9-1 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000228575.2Lrp12-20480643aaENSMUSP00000154273.2
 
Nonsense mediated decay
-A0A2I3BQR2 -
ENSMUST00000146714.2Lrp12-203433No protein-
 
Retained intron
--TSL:3
Description

protein tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:9611]

Gene Synonyms

FADK, FAK, FAK1, PPP1R71

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000522684.5PTK2-24049551052aaENSP00000429911.1
 
Protein coding
CCDS6381Q05397-1 -Ensembl CanonicalGENCODE basicTSL:1
ENST00000340930.7PTK2-20144141065aaENSP00000341189.3
 
Protein coding
CCDS56557Q05397-5 -GENCODE basicTSL:2
ENST00000521059.5PTK2-22844051052aaENSP00000429474.1
 
Protein coding
CCDS6381Q05397-1 -GENCODE basicTSL:1
ENST00000430260.6PTK2-2031940362aaENSP00000403416.2
 
Protein coding
CCDS87628B4DWJ1 -GENCODE basicTSL:2
ENST00000517887.5PTK2-20746611096aaENSP00000429082.1
 
Protein coding
-E7ESA6 -GENCODE basicAPPRIS P1TSL:5
ENST00000519419.5PTK2-21244391096aaENSP00000429129.1
 
Protein coding
-E7ESA6 -GENCODE basicAPPRIS P1TSL:5
ENST00000395218.3PTK2-20244151006aaENSP00000378644.3
 
Protein coding
-Q05397-7 -GENCODE basicTSL:5
ENST00000519654.5PTK2-21541291017aaENSP00000429929.1
 
Protein coding
-H0YBP1 -TSL:1CDS 5' incomplete
ENST00000517712.5PTK2-2063351115aaENSP00000430916.1
 
Protein coding
-E5RHD8 -GENCODE basicTSL:2
ENST00000519465.5PTK2-2133279680aaENSP00000429170.1
 
Protein coding
-E9PEI4 -GENCODE basicTSL:1
ENST00000523539.5PTK2-2463236724aaENSP00000428492.1
 
Protein coding
-H0YB16 -TSL:2CDS 5' incomplete
ENST00000521986.5PTK2-2382393753aaENSP00000430603.1
 
Protein coding
-H0YBZ1 -TSL:2CDS 5' incomplete
ENST00000519881.5PTK2-216863121aaENSP00000430277.1
 
Protein coding
-E5RFW9 -GENCODE basicTSL:3
ENST00000523803.5PTK2-252750120aaENSP00000429530.1
 
Protein coding
-E5RI72 -TSL:3CDS 3' incomplete
ENST00000521562.5PTK2-233678132aaENSP00000431106.1
 
Protein coding
-E5RJQ2 -TSL:4CDS 3' incomplete
ENST00000521332.5PTK2-23163065aaENSP00000429409.1
 
Protein coding
-E5RIK4 -TSL:4CDS 3' incomplete
ENST00000523435.1PTK2-244629120aaENSP00000430828.1
 
Protein coding
-E5RI03 -TSL:4CDS 3' incomplete
ENST00000520045.5PTK2-219602117aaENSP00000430044.1
 
Protein coding
-E5RH01 -TSL:4CDS 3' incomplete
ENST00000523388.5PTK2-24358167aaENSP00000429702.1
 
Protein coding
-E5RHK7 -TSL:2CDS 3' incomplete
ENST00000519024.5PTK2-210576168aaENSP00000428232.1
 
Protein coding
-E5RJI4 -TSL:4CDS 3' incomplete
ENST00000520828.5PTK2-22357459aaENSP00000427762.1
 
Protein coding
-E5RG86 -TSL:4CDS 3' incomplete
ENST00000520151.5PTK2-220573124aaENSP00000428482.1
 
Protein coding
-E5RI29 -GENCODE basicTSL:4
ENST00000520892.5PTK2-225571121aaENSP00000427904.1
 
Protein coding
-E5RFW9 -GENCODE basicTSL:4
ENST00000517453.5PTK2-205571117aaENSP00000430951.1
 
Protein coding
-E5RH01 -TSL:4CDS 3' incomplete
ENST00000520475.5PTK2-222570156aaENSP00000428792.1
 
Protein coding
-E5RGA6 -TSL:5CDS 3' incomplete
ENST00000522424.5PTK2-239569133aaENSP00000427774.1
 
Protein coding
-E5RG80 -TSL:4CDS 3' incomplete
ENST00000522950.1PTK2-24154867aaENSP00000429437.1
 
Protein coding
-E5RII9 -GENCODE basicTSL:4
ENST00000521907.5PTK2-235542119aaENSP00000427795.1
 
Protein coding
-E5RG66 -TSL:4CDS 3' incomplete
ENST00000521395.5PTK2-232540107aaENSP00000429907.1
 
Protein coding
-E5RH48 -TSL:4CDS 3' incomplete
ENST00000524357.5PTK2-257535122aaENSP00000429001.1
 
Protein coding
-E5RJP0 -TSL:4CDS 3' incomplete
ENST00000523679.1PTK2-24950414aaENSP00000429028.1
 
Protein coding
-E5RJN1 -TSL:3CDS 3' incomplete
ENST00000524040.5PTK2-25447551aaENSP00000430037.1
 
Protein coding
-E5RH08 -TSL:2CDS 3' incomplete
ENST00000524257.5PTK2-2564308aaENSP00000431023.1
 
Protein coding
-A0A1D5RMT1 -TSL:4CDS 3' incomplete
ENST00000519993.5PTK2-218438866aaENSP00000428570.1
 
Nonsense mediated decay
-E5RG54 -TSL:1
ENST00000524202.5PTK2-2553014319aaENSP00000429023.1
 
Nonsense mediated decay
-H0YB99 -TSL:1CDS 5' incomplete
ENST00000521250.5PTK2-23059272aaENSP00000427972.1
 
Nonsense mediated decay
-H0YAS0 -TSL:4CDS 5' incomplete
ENST00000521029.5PTK2-22758479aaENSP00000429958.1
 
Nonsense mediated decay
-E5RGP1 -TSL:4
ENST00000521791.5PTK2-23455666aaENSP00000427825.1
 
Nonsense mediated decay
-E5RG54 -TSL:4
ENST00000521981.5PTK2-236552128aaENSP00000428593.1
 
Nonsense mediated decay
-H0YB33 -TSL:5CDS 5' incomplete
ENST00000523670.5PTK2-24754272aaENSP00000428380.1
 
Nonsense mediated decay
-E5RIR5 -TSL:4
ENST00000523067.5PTK2-24248866aaENSP00000429895.1
 
Nonsense mediated decay
-E5RG54 -TSL:4
ENST00000519635.1PTK2-214578No protein-
 
Processed transcript
---TSL:4
ENST00000523746.5PTK2-250574No protein-
 
Processed transcript
---TSL:4
ENST00000520460.1PTK2-221572No protein-
 
Processed transcript
---TSL:4
ENST00000518509.5PTK2-209569No protein-
 
Processed transcript
---TSL:4
ENST00000523474.5PTK2-245567No protein-
 
Processed transcript
---TSL:5
ENST00000519361.5PTK2-211553No protein-
 
Processed transcript
---TSL:5
ENST00000521985.1PTK2-237538No protein-
 
Processed transcript
---TSL:3
ENST00000521172.1PTK2-229507No protein-
 
Processed transcript
---TSL:5
ENST00000523805.5PTK2-253440No protein-
 
Processed transcript
---TSL:3
ENST00000520843.5PTK2-224438No protein-
 
Processed transcript
---TSL:5
ENST00000523797.1PTK2-251405No protein-
 
Processed transcript
---TSL:3
ENST00000519899.5PTK2-217762No protein-
 
Retained intron
---TSL:2
ENST00000520917.1PTK2-226653No protein-
 
Retained intron
---TSL:4
ENST00000523675.1PTK2-248650No protein-
 
Retained intron
---TSL:3
ENST00000510126.2PTK2-204580No protein-
 
Retained intron
---TSL:4
ENST00000518173.5PTK2-208441No protein-
 
Retained intron
---TSL:2
Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:10866]

Gene Synonyms

MRT12, SIAT6

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000347631.8ST3GAL3-2052254375aaENSP00000317192.6
 
Protein coding
CCDS492Q11203-1 NM_006279.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENST00000642331.1ST3GAL3-2412487449aaENSP00000493823.1
 
Protein coding
CCDS85965A0A2R8YDJ6 -GENCODE basic
ENST00000643252.1ST3GAL3-2462422434aaENSP00000495333.1
 
Protein coding
CCDS85962A0A2R8Y6H4 -GENCODE basic
ENST00000262915.8ST3GAL3-2012412444aaENSP00000262915.3
 
Protein coding
CCDS493Q11203-4 -GENCODE basicTSL:5
ENST00000351035.8ST3GAL3-2062388429aaENSP00000316999.6
 
Protein coding
CCDS496Q11203-13 -GENCODE basicTSL:5
ENST00000646971.1ST3GAL3-2782343375aaENSP00000495887.1
 
Protein coding
CCDS492Q11203-1 -GENCODE basicAPPRIS ALT1
ENST00000644195.1ST3GAL3-2532312375aaENSP00000494201.1
 
Protein coding
CCDS492Q11203-1 -GENCODE basicAPPRIS ALT1
ENST00000361392.9ST3GAL3-2082297390aaENSP00000355341.5
 
Protein coding
CCDS494Q11203-2 -GENCODE basicTSL:1
ENST00000361400.9ST3GAL3-2092212359aaENSP00000354748.4
 
Protein coding
CCDS497Q11203-15 -GENCODE basicAPPRIS P3TSL:1
ENST00000372374.7ST3GAL3-2192124344aaENSP00000361449.2
 
Protein coding
CCDS57989Q11203-7 -GENCODE basicTSL:5
ENST00000372372.7ST3GAL3-2182109413aaENSP00000361447.2
 
Protein coding
CCDS498Q11203-19 -GENCODE basicTSL:1
ENST00000647237.1ST3GAL3-2822103331aaENSP00000495624.1
 
Protein coding
CCDS85961A0A2R8Y6L4 -GENCODE basic
ENST00000353126.8ST3GAL3-2071942277aaENSP00000330463.3
 
Protein coding
CCDS495Q11203-8 -GENCODE basicTSL:5
ENST00000642934.1ST3GAL3-2441885261aaENSP00000494146.1
 
Protein coding
CCDS57990Q11203-16 -GENCODE basic
ENST00000335430.10ST3GAL3-2041805185aaENSP00000335633.7
 
Protein coding
CCDS57994Q11203-23 -GENCODE basicTSL:5
ENST00000545417.5ST3GAL3-2391667170aaENSP00000439634.1
 
Protein coding
CCDS499Q11203-3 -GENCODE basicTSL:5
ENST00000330208.6ST3GAL3-2021479101aaENSP00000333494.3
 
Protein coding
CCDS57992Q11203-22 -GENCODE basicTSL:5
ENST00000372366.6ST3GAL3-2141421185aaENSP00000361441.1
 
Protein coding
CCDS57994Q11203-23 -GENCODE basicTSL:1
ENST00000372369.5ST3GAL3-2171038345aaENSP00000361444.1
 
Protein coding
CCDS57988Q11203-5 -GENCODE basicTSL:1
ENST00000361812.9ST3GAL3-2111020170aaENSP00000355201.4
 
Protein coding
CCDS499Q11203-3 -GENCODE basicTSL:1
ENST00000531993.6ST3GAL3-234693230aaENSP00000432682.2
 
Protein coding
CCDS85964Q11203-21 -GENCODE basicTSL:1
ENST00000372367.5ST3GAL3-215644201aaENSP00000361442.1
 
Protein coding
CCDS57993Q11203-24 -GENCODE basicTSL:1
ENST00000528371.5ST3GAL3-229599186aaENSP00000434876.1
 
Protein coding
CCDS57991Q11203-17 -GENCODE basicTSL:1
ENST00000372362.6ST3GAL3-212468155aaENSP00000361437.2
 
Protein coding
CCDS500Q11203-12 -GENCODE basicTSL:1
ENST00000531451.5ST3GAL3-232420139aaENSP00000435603.1
 
Protein coding
CCDS53310Q11203-18 -GENCODE basicTSL:1
ENST00000531816.1ST3GAL3-233344101aaENSP00000434378.1
 
Protein coding
CCDS57992Q11203-22 -GENCODE basicTSL:1
ENST00000645161.1ST3GAL3-2623282172aaENSP00000495013.1
 
Protein coding
-A0A2R8Y682 -CDS 5' incomplete
ENST00000647148.1ST3GAL3-2812354411aaENSP00000495939.1
 
Protein coding
-A0A2R8Y7D8 -GENCODE basic
ENST00000645034.1ST3GAL3-2592256453aaENSP00000496350.1
 
Protein coding
-A0A2R8Y7Z2 -GENCODE basic
ENST00000361746.9ST3GAL3-2102229406aaENSP00000354657.5
 
Protein coding
-A0A2U3TZK9 -GENCODE basicTSL:1
ENST00000646686.1ST3GAL3-2762221418aaENSP00000495683.1
 
Protein coding
-A0A2R8Y732 -GENCODE basic
ENST00000372368.7ST3GAL3-2162074380aaENSP00000361443.3
 
Protein coding
-A0A2U3TZM2 -GENCODE basicTSL:1
ENST00000644287.1ST3GAL3-2541905344aaENSP00000496054.1
 
Protein coding
-A0A2R8Y7J2 -CDS 5' incomplete
ENST00000533933.6ST3GAL3-2371844307aaENSP00000432965.2
 
Protein coding
-A0A2U3U052 -TSL:1CDS 5' incomplete
ENST00000644922.1ST3GAL3-2571719266aaENSP00000496289.1
 
Protein coding
-A0A2R8YFA0 -CDS 5' incomplete
ENST00000332628.11ST3GAL3-2031681304aaENSP00000329755.7
 
Protein coding
-A0A2U3TZH9 -TSL:1CDS 5' incomplete
ENST00000647503.1ST3GAL3-2851435163aaENSP00000494118.1
 
Protein coding
-A0A2R8Y4W6 -CDS 5' incomplete
ENST00000645117.1ST3GAL3-2601148165aaENSP00000495252.1
 
Protein coding
-A0A2R8YE42 -CDS 5' incomplete
ENST00000484868.2ST3GAL3-2241053102aaENSP00000496035.1
 
Protein coding
-A0A2R8Y7D5 -GENCODE basicTSL:3
ENST00000643989.1ST3GAL3-25173390aaENSP00000496568.1
 
Protein coding
-A0A2R8YH87 -CDS 5' incomplete
ENST00000372365.5ST3GAL3-213673186aaENSP00000361440.1
 
Protein coding
-Q11203-10 -GENCODE basicTSL:1
ENST00000490502.1ST3GAL3-226592197aaENSP00000436298.1
 
Protein coding
-H0YEP7 -TSL:3CDS 5' and 3' incomplete
ENST00000646109.1ST3GAL3-27352475aaENSP00000493476.1
 
Protein coding
-A0A2R8Y244 -CDS 3' incomplete
ENST00000645640.1ST3GAL3-2652602121aaENSP00000494852.1
 
Nonsense mediated decay
-Q11203-11 --
ENST00000645142.1ST3GAL3-2612458189aaENSP00000496550.1
 
Nonsense mediated decay
-Q11203-6 --
ENST00000642949.1ST3GAL3-2452278189aaENSP00000495709.1
 
Nonsense mediated decay
-Q11203-6 --
ENST00000645705.1ST3GAL3-2682266130aaENSP00000496492.1
 
Nonsense mediated decay
-A0A2R8YFI8 --
ENST00000645165.1ST3GAL3-2632261121aaENSP00000493660.1
 
Nonsense mediated decay
-Q11203-11 --
ENST00000643283.1ST3GAL3-2472242204aaENSP00000494746.1
 
Nonsense mediated decay
-A0A2R8YF05 --
ENST00000647134.1ST3GAL3-280221799aaENSP00000495797.1
 
Nonsense mediated decay
-A0A2R8Y6U8 --
ENST00000647482.1ST3GAL3-2842210142aaENSP00000495567.1
 
Nonsense mediated decay
-A0A2R8Y6U3 --
ENST00000646027.1ST3GAL3-2692179298aaENSP00000494396.1
 
Nonsense mediated decay
-A0A2R8YDB0 --
ENST00000646069.1ST3GAL3-2712106276aaENSP00000496585.1
 
Nonsense mediated decay
-A0A2R8YFM5 --
ENST00000642504.1ST3GAL3-2422098115aaENSP00000494857.1
 
Nonsense mediated decay
-Q11203-9 --
ENST00000643813.1ST3GAL3-249209855aaENSP00000496646.1
 
Nonsense mediated decay
-A0A2R8Y847 -CDS 5' incomplete
ENST00000643597.1ST3GAL3-2482007202aaENSP00000495977.1
 
Nonsense mediated decay
-A0A2R8Y7B2 --
ENST00000645394.1ST3GAL3-2642007158aaENSP00000495299.1
 
Nonsense mediated decay
-A0A2R8Y6K5 --
ENST00000642194.1ST3GAL3-2401762166aaENSP00000493708.1
 
Nonsense mediated decay
-A0A2R8YDA9 --
ENST00000642780.1ST3GAL3-2431684119aaENSP00000494013.1
 
Nonsense mediated decay
-A0A2R8YCV7 -CDS 5' incomplete
ENST00000530154.5ST3GAL3-2301670106aaENSP00000434686.1
 
Nonsense mediated decay
-E9PNN5 -TSL:2
ENST00000644645.1ST3GAL3-2561538106aaENSP00000495647.1
 
Nonsense mediated decay
-A0A2R8Y717 -CDS 5' incomplete
ENST00000469715.6ST3GAL3-222127773aaENSP00000431700.2
 
Nonsense mediated decay
-Q11203-26 -TSL:1
ENST00000533997.6ST3GAL3-2381191115aaENSP00000432071.1
 
Nonsense mediated decay
-Q11203-9 -TSL:1
ENST00000490541.6ST3GAL3-227103743aaENSP00000435018.2
 
Nonsense mediated decay
-Q11203-25 -TSL:1
ENST00000489897.6ST3GAL3-2251000121aaENSP00000437206.1
 
Nonsense mediated decay
-Q11203-11 -TSL:5
ENST00000646096.1ST3GAL3-27298185aaENSP00000496444.1
 
Nonsense mediated decay
-E9PJI3 --
ENST00000530581.5ST3GAL3-231893228aaENSP00000437293.1
 
Nonsense mediated decay
-Q11203-20 -TSL:1
ENST00000479383.6ST3GAL3-22388385aaENSP00000432214.1
 
Nonsense mediated decay
-E9PJI3 -TSL:3
ENST00000533212.5ST3GAL3-236781151aaENSP00000435621.1
 
Nonsense mediated decay
-Q11203-14 -TSL:1
ENST00000647128.1ST3GAL3-279708105aaENSP00000494374.1
 
Nonsense mediated decay
-A0A2R8Y4Y4 --
ENST00000532911.6ST3GAL3-23570385aaENSP00000431816.1
 
Nonsense mediated decay
-E9PJI3 -TSL:5
ENST00000461066.6ST3GAL3-220692100aaENSP00000433668.1
 
Nonsense mediated decay
-E9PJX2 -TSL:5
ENST00000646032.1ST3GAL3-27056621aaENSP00000496117.1
 
Nonsense mediated decay
-A0A2R8Y7H6 -CDS 5' incomplete
ENST00000643886.1ST3GAL3-25055954aaENSP00000495313.1
 
Nonsense mediated decay
-A0A2R8YFP6 --
ENST00000461375.2ST3GAL3-221853No protein-
 
Processed transcript
---TSL:5
ENST00000646416.1ST3GAL3-2754776No protein-
 
Retained intron
----
ENST00000647299.1ST3GAL3-2833416No protein-
 
Retained intron
----
ENST00000646776.1ST3GAL3-2773218No protein-
 
Retained intron
----
ENST00000645670.1ST3GAL3-2672718No protein-
 
Retained intron
----
ENST00000495482.2ST3GAL3-2282593No protein-
 
Retained intron
---TSL:2
ENST00000644016.1ST3GAL3-2522008No protein-
 
Retained intron
----
ENST00000645644.1ST3GAL3-2661707No protein-
 
Retained intron
----
ENST00000644378.1ST3GAL3-2551222No protein-
 
Retained intron
----
ENST00000645012.1ST3GAL3-258837No protein-
 
Retained intron
----
ENST00000646113.1ST3GAL3-274492No protein-
 
Retained intron
----
Description

Sp3 transcription factor [Source:HGNC Symbol;Acc:HGNC:11208]

Gene Synonyms

SPR-2

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000310015.12SP3-20111714781aaENSP00000310301.6
 
Protein coding
CCDS2254Q02447-1 NM_003111.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000418194.7SP3-2033937713aaENSP00000406140.3
 
Protein coding
CCDS46452Q02447-5 -GENCODE basicTSL:1
ENST00000652005.2SP3-2113801727aaENSP00000498392.2
 
Protein coding
-A0A494C070 -GENCODE basic
ENST00000416195.1SP3-2023627738aaENSP00000413665.1
 
Protein coding
-H0Y7L6 -TSL:1CDS 5' incomplete
ENST00000650743.1SP3-2092621617aaENSP00000498794.1
 
Nonsense mediated decay
-A0A494C0Z6 -CDS 5' incomplete
ENST00000651846.1SP3-2101088137aaENSP00000499057.1
 
Nonsense mediated decay
-A0A494C1G8 -CDS 5' incomplete
ENST00000483084.1SP3-207567No protein-
 
Processed transcript
---TSL:4
ENST00000462904.1SP3-205535No protein-
 
Processed transcript
---TSL:4
ENST00000490182.1SP3-208459No protein-
 
Processed transcript
---TSL:4
ENST00000418620.1SP3-204456No protein-
 
Processed transcript
---TSL:5
ENST00000465379.1SP3-2065489No protein-
 
Retained intron
---TSL:1
Description

Pvt1 oncogene [Source:HGNC Symbol;Acc:HGNC:9709]

Gene Synonyms

LINC00079, MIR1204HG, NCRNA00079, onco-lncRNA-100

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000651587.1PVT1-2242444No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000660438.1PVT1-2932450No protein-
 
lncRNA
--GENCODE basic
ENST00000523068.2PVT1-2162255No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000664995.1PVT1-3232230No protein-
 
lncRNA
--GENCODE basic
ENST00000659106.1PVT1-2832187No protein-
 
lncRNA
---
ENST00000660631.1PVT1-2952161No protein-
 
lncRNA
---
ENST00000657449.1PVT1-2652149No protein-
 
lncRNA
--GENCODE basic
ENST00000667418.1PVT1-3472143No protein-
 
lncRNA
--GENCODE basic
ENST00000666147.1PVT1-3362097No protein-
 
lncRNA
---
ENST00000656693.1PVT1-2541990No protein-
 
lncRNA
--GENCODE basic
ENST00000668098.1PVT1-3511985No protein-
 
lncRNA
---
ENST00000665856.1PVT1-3311965No protein-
 
lncRNA
--GENCODE basic
ENST00000656532.1PVT1-2531909No protein-
 
lncRNA
---
ENST00000670532.1PVT1-3681840No protein-
 
lncRNA
--GENCODE basic
ENST00000660456.1PVT1-2941814No protein-
 
lncRNA
---
ENST00000670714.1PVT1-3721756No protein-
 
lncRNA
---
ENST00000659912.1PVT1-2881744No protein-
 
lncRNA
---
ENST00000658840.1PVT1-2821738No protein-
 
lncRNA
--GENCODE basic
ENST00000662413.1PVT1-3081727No protein-
 
lncRNA
---
ENST00000664265.1PVT1-3171720No protein-
 
lncRNA
--GENCODE basic
ENST00000659326.1PVT1-2841706No protein-
 
lncRNA
--GENCODE basic
ENST00000667305.1PVT1-3461701No protein-
 
lncRNA
---
ENST00000513868.6PVT1-2031699No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000657356.1PVT1-2631697No protein-
 
lncRNA
--GENCODE basic
ENST00000668619.1PVT1-3571685No protein-
 
lncRNA
---
ENST00000662410.1PVT1-3071668No protein-
 
lncRNA
---
ENST00000667630.1PVT1-3491634No protein-
 
lncRNA
---
ENST00000666776.1PVT1-3401628No protein-
 
lncRNA
--GENCODE basic
ENST00000522963.6PVT1-2151619No protein-
 
lncRNA
--GENCODE basicTSL:4
ENST00000652816.1PVT1-2291610No protein-
 
lncRNA
---
ENST00000670204.1PVT1-3661600No protein-
 
lncRNA
--GENCODE basic
ENST00000656402.1PVT1-2501585No protein-
 
lncRNA
---
ENST00000657289.1PVT1-2611581No protein-
 
lncRNA
---
ENST00000661988.1PVT1-3051580No protein-
 
lncRNA
---
ENST00000521122.2PVT1-2101578No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000666777.1PVT1-3411555No protein-
 
lncRNA
---
ENST00000661160.1PVT1-3001546No protein-
 
lncRNA
---
ENST00000521951.1PVT1-2121535No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000659666.1PVT1-2861533No protein-
 
lncRNA
--GENCODE basic
ENST00000661625.1PVT1-3031519No protein-
 
lncRNA
--GENCODE basic
ENST00000669416.1PVT1-3621516No protein-
 
lncRNA
---
ENST00000517790.2PVT1-2051513No protein-
 
lncRNA
--TSL:2
ENST00000657112.1PVT1-2581499No protein-
 
lncRNA
---
ENST00000661830.1PVT1-3041490No protein-
 
lncRNA
---
ENST00000653853.1PVT1-2371490No protein-
 
lncRNA
---
ENST00000669951.1PVT1-3641485No protein-
 
lncRNA
---
ENST00000654369.1PVT1-2421482No protein-
 
lncRNA
---
ENST00000666080.1PVT1-3341481No protein-
 
lncRNA
---
ENST00000663461.1PVT1-3121471No protein-
 
lncRNA
---
ENST00000523190.7PVT1-2171466No protein-
 
lncRNA
--TSL:3
ENST00000667149.1PVT1-3441463No protein-
 
lncRNA
---
ENST00000654105.1PVT1-2401460No protein-
 
lncRNA
---
ENST00000657596.1PVT1-2681455No protein-
 
lncRNA
---
ENST00000657451.1PVT1-2661454No protein-
 
lncRNA
---
ENST00000661205.1PVT1-3011449No protein-
 
lncRNA
---
ENST00000668123.1PVT1-3521433No protein-
 
lncRNA
---
ENST00000669272.1PVT1-3601417No protein-
 
lncRNA
---
ENST00000654324.1PVT1-2411411No protein-
 
lncRNA
---
ENST00000665737.1PVT1-3301410No protein-
 
lncRNA
---
ENST00000658350.1PVT1-2791402No protein-
 
lncRNA
---
ENST00000664299.1PVT1-3191396No protein-
 
lncRNA
---
ENST00000671092.1PVT1-3751393No protein-
 
lncRNA
---
ENST00000657667.1PVT1-2691378No protein-
 
lncRNA
---
ENST00000659625.1PVT1-2851363No protein-
 
lncRNA
---
ENST00000657211.1PVT1-2601353No protein-
 
lncRNA
---
ENST00000670795.1PVT1-3731348No protein-
 
lncRNA
---
ENST00000663059.1PVT1-3111330No protein-
 
lncRNA
---
ENST00000653990.1PVT1-2381329No protein-
 
lncRNA
---
ENST00000670223.1PVT1-3671321No protein-
 
lncRNA
---
ENST00000656999.1PVT1-2571314No protein-
 
lncRNA
---
ENST00000666353.1PVT1-3381312No protein-
 
lncRNA
---
ENST00000654091.1PVT1-2391311No protein-
 
lncRNA
---
ENST00000656411.1PVT1-2511281No protein-
 
lncRNA
---
ENST00000669082.1PVT1-3581280No protein-
 
lncRNA
---
ENST00000653497.1PVT1-2331278No protein-
 
lncRNA
---
ENST00000653522.1PVT1-2341275No protein-
 
lncRNA
---
ENST00000667714.1PVT1-3501269No protein-
 
lncRNA
---
ENST00000653845.1PVT1-2361262No protein-
 
lncRNA
---
ENST00000685634.1PVT1-3781256No protein-
 
lncRNA
---
ENST00000657517.1PVT1-2671253No protein-
 
lncRNA
---
ENST00000664293.1PVT1-3181206No protein-
 
lncRNA
---
ENST00000663753.1PVT1-3141206No protein-
 
lncRNA
---
ENST00000664742.1PVT1-3211200No protein-
 
lncRNA
---
ENST00000660122.1PVT1-2901199No protein-
 
lncRNA
---
ENST00000517525.2PVT1-2041194No protein-
 
lncRNA
--TSL:3
ENST00000671088.1PVT1-3741191No protein-
 
lncRNA
---
ENST00000657183.1PVT1-2591172No protein-
 
lncRNA
--GENCODE basic
ENST00000656491.1PVT1-2521167No protein-
 
lncRNA
---
ENST00000658556.1PVT1-2811163No protein-
 
lncRNA
---
ENST00000692433.1PVT1-3821163No protein-
 
lncRNA
---
ENST00000665721.1PVT1-3291162No protein-
 
lncRNA
---
ENST00000669132.1PVT1-3591156No protein-
 
lncRNA
---
ENST00000662766.1PVT1-3101152No protein-
 
lncRNA
---
ENST00000660200.1PVT1-2921139No protein-
 
lncRNA
--GENCODE basic
ENST00000662061.1PVT1-3061139No protein-
 
lncRNA
---
ENST00000522414.2PVT1-2131132No protein-
 
lncRNA
--TSL:2
ENST00000660896.1PVT1-2981128No protein-
 
lncRNA
---
ENST00000652695.1PVT1-2271126No protein-
 
lncRNA
---
ENST00000670602.1PVT1-3701124No protein-
 
lncRNA
---
ENST00000655783.1PVT1-2461118No protein-
 
lncRNA
---
ENST00000524165.6PVT1-2201114No protein-
 
lncRNA
--TSL:2
ENST00000664610.1PVT1-3201114No protein-
 
lncRNA
---
ENST00000670626.1PVT1-3711114No protein-
 
lncRNA
---
ENST00000512617.7PVT1-2021109No protein-
 
lncRNA
--TSL:3
ENST00000656077.1PVT1-2471109No protein-
 
lncRNA
--GENCODE basic
ENST00000665246.1PVT1-3261096No protein-
 
lncRNA
---
ENST00000668479.1PVT1-3551091No protein-
 
lncRNA
---
ENST00000657384.1PVT1-2641068No protein-
 
lncRNA
---
ENST00000669509.1PVT1-3631066No protein-
 
lncRNA
---
ENST00000666076.1PVT1-3331062No protein-
 
lncRNA
---
ENST00000523328.6PVT1-2181047No protein-
 
lncRNA
--TSL:1
ENST00000667539.1PVT1-3481041No protein-
 
lncRNA
---
ENST00000664139.1PVT1-3151036No protein-
 
lncRNA
---
ENST00000650846.1PVT1-2211020No protein-
 
lncRNA
---
ENST00000666842.1PVT1-3421019No protein-
 
lncRNA
---
ENST00000652492.1PVT1-2261017No protein-
 
lncRNA
--GENCODE basic
ENST00000656880.1PVT1-2551017No protein-
 
lncRNA
---
ENST00000504719.7PVT1-2011017No protein-
 
lncRNA
--TSL:2
ENST00000519481.6PVT1-2081010No protein-
 
lncRNA
--TSL:2
ENST00000685606.1PVT1-3771004No protein-
 
lncRNA
---
ENST00000666452.1PVT1-3391001No protein-
 
lncRNA
---
ENST00000665698.1PVT1-3281000No protein-
 
lncRNA
---
ENST00000518528.2PVT1-207995No protein-
 
lncRNA
--TSL:3
ENST00000655594.1PVT1-245978No protein-
 
lncRNA
---
ENST00000657693.1PVT1-271977No protein-
 
lncRNA
---
ENST00000651568.1PVT1-223971No protein-
 
lncRNA
--GENCODE basic
ENST00000665166.1PVT1-324965No protein-
 
lncRNA
---
ENST00000665175.1PVT1-325964No protein-
 
lncRNA
---
ENST00000666223.1PVT1-337963No protein-
 
lncRNA
---
ENST00000668480.1PVT1-356956No protein-
 
lncRNA
---
ENST00000656396.1PVT1-249938No protein-
 
lncRNA
---
ENST00000656168.1PVT1-248935No protein-
 
lncRNA
--GENCODE basic
ENST00000661391.1PVT1-302924No protein-
 
lncRNA
---
ENST00000522875.5PVT1-214922No protein-
 
lncRNA
--TSL:5
ENST00000690350.1PVT1-380922No protein-
 
lncRNA
---
ENST00000651664.1PVT1-225914No protein-
 
lncRNA
---
ENST00000658158.1PVT1-276909No protein-
 
lncRNA
--GENCODE basic
ENST00000657297.1PVT1-262907No protein-
 
lncRNA
---
ENST00000653608.1PVT1-235906No protein-
 
lncRNA
---
ENST00000656948.1PVT1-256904No protein-
 
lncRNA
---
ENST00000667204.1PVT1-345897No protein-
 
lncRNA
---
ENST00000690788.1PVT1-381891No protein-
 
lncRNA
---
ENST00000669407.1PVT1-361890No protein-
 
lncRNA
---
ENST00000664924.1PVT1-322886No protein-
 
lncRNA
---
ENST00000670535.1PVT1-369876No protein-
 
lncRNA
---
ENST00000660069.1PVT1-289870No protein-
 
lncRNA
---
ENST00000652993.1PVT1-231866No protein-
 
lncRNA
---
ENST00000664214.1PVT1-316861No protein-
 
lncRNA
---
ENST00000662709.1PVT1-309858No protein-
 
lncRNA
---
ENST00000655099.1PVT1-243855No protein-
 
lncRNA
---
ENST00000660781.1PVT1-297854No protein-
 
lncRNA
---
ENST00000692980.1PVT1-383851No protein-
 
lncRNA
---
ENST00000523427.2PVT1-219837No protein-
 
lncRNA
--TSL:3
ENST00000520913.2PVT1-209835No protein-
 
lncRNA
--TSL:2
ENST00000666878.1PVT1-343830No protein-
 
lncRNA
---
ENST00000652883.1PVT1-230821No protein-
 
lncRNA
---
ENST00000517838.6PVT1-206821No protein-
 
lncRNA
--TSL:2
ENST00000658018.1PVT1-274820No protein-
 
lncRNA
---
ENST00000652728.1PVT1-228812No protein-
 
lncRNA
---
ENST00000671587.1PVT1-376803No protein-
 
lncRNA
---
ENST00000659892.1PVT1-287782No protein-
 
lncRNA
---
ENST00000650930.1PVT1-222777No protein-
 
lncRNA
---
ENST00000660146.1PVT1-291764No protein-
 
lncRNA
---
ENST00000665372.1PVT1-327762No protein-
 
lncRNA
---
ENST00000658429.1PVT1-280760No protein-
 
lncRNA
---
ENST00000668351.1PVT1-354759No protein-
 
lncRNA
---
ENST00000660912.1PVT1-299754No protein-
 
lncRNA
---
ENST00000658065.1PVT1-275745No protein-
 
lncRNA
---
ENST00000655148.1PVT1-244724No protein-
 
lncRNA
---
ENST00000657945.1PVT1-273678No protein-
 
lncRNA
---
ENST00000660659.1PVT1-296673No protein-
 
lncRNA
---
ENST00000658305.1PVT1-278641No protein-
 
lncRNA
---
ENST00000653406.1PVT1-232619No protein-
 
lncRNA
---
ENST00000663715.1PVT1-313615No protein-
 
lncRNA
---
ENST00000657682.1PVT1-270611No protein-
 
lncRNA
---
ENST00000657844.1PVT1-272609No protein-
 
lncRNA
---
ENST00000666105.1PVT1-335608No protein-
 
lncRNA
---
ENST00000668215.1PVT1-353590No protein-
 
lncRNA
---
ENST00000689722.1PVT1-379573No protein-
 
lncRNA
---
ENST00000666039.1PVT1-332520No protein-
 
lncRNA
---
ENST00000670009.1PVT1-365456No protein-
 
lncRNA
---
ENST00000658242.1PVT1-277432No protein-
 
lncRNA
---
ENST00000521600.5PVT1-211408No protein-
 
lncRNA
--TSL:2
Statistics

Exons: 9, Coding exons: 0, Transcript length: 1,533 bps,

Version

ENST00000659666.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x32e71128)