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EnsemblEnsembl Home
Description

semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]

Gene Synonyms

FLJ11598, KIAA1479

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000536845.7SEMA6D-20759071073aaENSP00000446152.3
 
Protein coding
CCDS32225Q8NFY4-1 NM_001358351.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:2
ENST00000316364.9SEMA6D-20160991073aaENSP00000324857.5
 
Protein coding
CCDS32225Q8NFY4-1 -GENCODE basicAPPRIS P4TSL:1
ENST00000558014.5SEMA6D-20860281011aaENSP00000452815.1
 
Protein coding
CCDS32224Q8NFY4-2 -GENCODE basicTSL:1
ENST00000354744.8SEMA6D-20259311017aaENSP00000346786.4
 
Protein coding
CCDS32226Q8NFY4-4 -GENCODE basicTSL:1
ENST00000358066.8SEMA6D-20459131011aaENSP00000350770.4
 
Protein coding
CCDS32224Q8NFY4-2 -GENCODE basicTSL:1
ENST00000355997.7SEMA6D-2035908597aaENSP00000348276.3
 
Protein coding
CCDS32228Q8NFY4-8 -GENCODE basicTSL:5
ENST00000389428.7SEMA6D-2065874998aaENSP00000374079.3
 
Protein coding
CCDS32227Q8NFY4-3 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000558816.5SEMA6D-2104419597aaENSP00000453661.1
 
Protein coding
CCDS32228Q8NFY4-8 -GENCODE basicTSL:5
ENST00000389425.7SEMA6D-2052318476aaENSP00000374076.3
 
Protein coding
CCDS32229Q8NFY4-7 -GENCODE basicTSL:1
ENST00000559196.1SEMA6D-213734219aaENSP00000453755.1
 
Protein coding
-H0YMV0 -TSL:2CDS 3' incomplete
ENST00000560006.1SEMA6D-214592198aaENSP00000453689.1
 
Protein coding
-H0YMP7 -TSL:4CDS 5' and 3' incomplete
ENST00000561133.5SEMA6D-217588148aaENSP00000453530.1
 
Protein coding
-H0YMA6 -TSL:4CDS 3' incomplete
ENST00000559064.1SEMA6D-21158054aaENSP00000453518.1
 
Protein coding
-H0YM97 -TSL:3CDS 5' incomplete
ENST00000559184.5SEMA6D-21254522aaENSP00000453097.1
 
Protein coding
-H0YL82 -TSL:4CDS 3' incomplete
ENST00000560636.5SEMA6D-2154791aaENSP00000453420.1
 
Protein coding
---TSL:4CDS 3' incomplete
ENST00000558431.1SEMA6D-209595No protein-
 
Retained intron
---TSL:4
ENST00000561106.1SEMA6D-216530No protein-
 
Retained intron
---TSL:4
Description

ADAM metallopeptidase domain 3A (pseudogene) [Source:HGNC Symbol;Acc:HGNC:209]

Gene Synonyms

ADAM3, CYRN1, tMDCI

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000490268.6ADAM3A-2072627No protein-
 
Processed transcript
--GENCODE basicTSL:1
ENST00000460383.6ADAM3A-2022528No protein-
 
Processed transcript
--GENCODE basicTSL:1
ENST00000481351.6ADAM3A-2052379No protein-
 
Processed transcript
--GENCODE basicTSL:1
ENST00000474764.6ADAM3A-2042341No protein-
 
Processed transcript
--TSL:5
ENST00000495171.6ADAM3A-2082284No protein-
 
Processed transcript
--GENCODE basicTSL:1
ENST00000497806.5ADAM3A-2091245No protein-
 
Processed transcript
--GENCODE basicTSL:5
ENST00000424066.2ADAM3A-2011142No protein-
 
Processed transcript
--TSL:2
ENST00000484602.5ADAM3A-2061046No protein-
 
Processed transcript
--GENCODE basicTSL:2
ENST00000461344.5ADAM3A-2032157No protein-
 
Transcribed unitary pseudogene
--Ensembl CanonicalGENCODE basicTSL:NA
Description

microtubule actin crosslinking factor 1 [Source:HGNC Symbol;Acc:HGNC:13664]

Gene Synonyms

ABP620, ACF7, FLJ45612, FLJ46776, KIAA0465, KIAA1251, Lnc-PMIF, MACF

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000564288.6MACF1-230243407555aaENSP00000455274.1
 
Protein coding
-H3BPE1 NM_001394062.1MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:5
ENST00000361689.7MACF1-203176655430aaENSP00000354573.2
 
Protein coding
CCDS435Q9UPN3-2 -GENCODE basicTSL:5
ENST00000567887.5MACF1-231243197592aaENSP00000455823.1
 
Protein coding
-H3BQK9 -GENCODE basicAPPRIS P5TSL:5
ENST00000372915.8MACF1-204234317385aaENSP00000362006.4
 
Protein coding
---GENCODE basicAPPRIS ALT2TSL:5
ENST00000671089.2MACF1-234174335379aaENSP00000499399.1
 
Protein coding
-A0A590UJG2 -GENCODE basic
ENST00000372925.6MACF1-205144964434aaENSP00000362016.2
 
Protein coding
-H0Y390 -TSL:5CDS 5' incomplete
ENST00000683517.1MACF1-23971042276aaENSP00000508231.1
 
Protein coding
---CDS 5' incomplete
ENST00000672812.1MACF1-23565452146aaENSP00000499888.1
 
Protein coding
-A0A5F9ZGX0 -CDS 3' incomplete
ENST00000530262.5MACF1-22862572028aaENSP00000437059.1
 
Protein coding
-E9PNZ4 -TSL:5CDS 3' incomplete
ENST00000530275.3MACF1-22957671668aaENSP00000431179.3
 
Protein coding
-A0A0A6YYJ5 -TSL:NACDS 3' incomplete
ENST00000524432.5MACF1-22643381375aaENSP00000435070.1
 
Protein coding
-E9PLY5 -TSL:5CDS 3' incomplete
ENST00000360115.8MACF1-2022824543aaENSP00000353231.4
 
Protein coding
-H0Y314 -TSL:5CDS 5' incomplete
ENST00000673706.1MACF1-2362788930aaENSP00000501158.1
 
Protein coding
-A0A669KBB0 -CDS 5' and 3' incomplete
ENST00000446276.5MACF1-2082559455aaENSP00000391512.1
 
Protein coding
-H0Y4F5 -TSL:5CDS 5' incomplete
ENST00000442046.5MACF1-2072299368aaENSP00000407776.1
 
Protein coding
-H0Y6T5 -TSL:5CDS 5' incomplete
ENST00000602528.2MACF1-233211038aaENSP00000501156.1
 
Protein coding
-A0A669KB76 -GENCODE basicTSL:NA
ENST00000602421.5MACF1-2321423121aaENSP00000473615.1
 
Protein coding
-B4DQX9 -GENCODE basicTSL:2
ENST00000484793.5MACF1-219834121aaENSP00000434859.1
 
Protein coding
-B4DQX9 -GENCODE basicTSL:2
ENST00000494012.1MACF1-221667113aaENSP00000435892.1
 
Protein coding
-E9PS75 -TSL:4CDS 3' incomplete
ENST00000422234.2MACF1-206477159aaENSP00000412910.2
 
Protein coding
-H0Y7I1 -TSL:5CDS 5' and 3' incomplete
ENST00000673926.1MACF1-237569351aaENSP00000501154.1
 
Nonsense mediated decay
-A0A669KB84 -CDS 5' incomplete
ENST00000496804.5MACF1-22350651062aaENSP00000435078.1
 
Nonsense mediated decay
-E9PLY0 -TSL:5
ENST00000690939.1MACF1-254204076aaENSP00000509485.1
 
Nonsense mediated decay
----
ENST00000673980.1MACF1-2381893495aaENSP00000501071.1
 
Nonsense mediated decay
-A0A669KB06 -CDS 5' incomplete
ENST00000476350.1MACF1-2165304No protein-
 
Processed transcript
---TSL:2
ENST00000497807.1MACF1-2242689No protein-
 
Processed transcript
---TSL:1
ENST00000496360.5MACF1-2222080No protein-
 
Processed transcript
---TSL:2
ENST00000469490.1MACF1-213842No protein-
 
Processed transcript
---TSL:5
ENST00000480624.5MACF1-217642No protein-
 
Processed transcript
---TSL:3
ENST00000462103.1MACF1-209627No protein-
 
Processed transcript
---TSL:3
ENST00000473843.1MACF1-215598No protein-
 
Processed transcript
---TSL:2
ENST00000462496.5MACF1-210526No protein-
 
Processed transcript
---TSL:3
ENST00000469366.1MACF1-212460No protein-
 
Processed transcript
---TSL:3
ENST00000528611.1MACF1-227380No protein-
 
Processed transcript
---TSL:3
ENST00000289893.8MACF1-20119141No protein-
 
Retained intron
---TSL:5
ENST00000686067.1MACF1-2408828No protein-
 
Retained intron
----
ENST00000687997.1MACF1-2478635No protein-
 
Retained intron
----
ENST00000686657.1MACF1-2428149No protein-
 
Retained intron
----
ENST00000691623.1MACF1-2555849No protein-
 
Retained intron
----
ENST00000693209.1MACF1-2565488No protein-
 
Retained intron
----
ENST00000687271.1MACF1-2455243No protein-
 
Retained intron
----
ENST00000690080.1MACF1-2534222No protein-
 
Retained intron
----
ENST00000497964.1MACF1-2254160No protein-
 
Retained intron
---TSL:2
ENST00000472385.2MACF1-2143660No protein-
 
Retained intron
---TSL:3
ENST00000688426.1MACF1-2493170No protein-
 
Retained intron
----
ENST00000689911.1MACF1-2523046No protein-
 
Retained intron
----
ENST00000686687.1MACF1-2433033No protein-
 
Retained intron
----
ENST00000689726.1MACF1-2512916No protein-
 
Retained intron
----
ENST00000686941.1MACF1-2442819No protein-
 
Retained intron
----
ENST00000686260.1MACF1-2412666No protein-
 
Retained intron
----
ENST00000688212.1MACF1-2482645No protein-
 
Retained intron
----
ENST00000688822.1MACF1-2502603No protein-
 
Retained intron
----
ENST00000693546.1MACF1-2582598No protein-
 
Retained intron
----
ENST00000687885.1MACF1-2461518No protein-
 
Retained intron
----
ENST00000693392.1MACF1-2571481No protein-
 
Retained intron
----
ENST00000467673.5MACF1-211792No protein-
 
Retained intron
---TSL:3
ENST00000484393.1MACF1-218750No protein-
 
Retained intron
---TSL:2
ENST00000485063.1MACF1-220438No protein-
 
Retained intron
---TSL:3
Description

SPG7 matrix AAA peptidase subunit, paraplegin [Source:HGNC Symbol;Acc:HGNC:11237]

Gene Synonyms

CAR, CMAR, SPG5C

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000645818.2SPG7-2683076795aaENSP00000495795.2
 
Protein coding
CCDS10977Q9UQ90-1 NM_003119.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2
ENST00000341316.6SPG7-2022288489aaENSP00000341157.2
 
Protein coding
CCDS10978Q9UQ90-2 -GENCODE basicTSL:1
ENST00000647079.1SPG7-2903330659aaENSP00000495967.1
 
Protein coding
-A0A2R8Y726 -GENCODE basic
ENST00000645063.1SPG7-2623266809aaENSP00000493590.1
 
Protein coding
-A0A2R8Y3M4 -GENCODE basic
ENST00000646303.1SPG7-2773099751aaENSP00000494160.1
 
Protein coding
-A0A2R8Y4Y7 -GENCODE basic
ENST00000268704.7SPG7-2013026788aaENSP00000268704.3
 
Protein coding
-A0A2U3TZH1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000644781.1SPG7-2583012780aaENSP00000495473.1
 
Protein coding
-A0A2R8YFW4 -GENCODE basic
ENST00000644671.1SPG7-2552689681aaENSP00000495999.1
 
Protein coding
-A0A2R8Y7B8 -CDS 5' incomplete
ENST00000647032.1SPG7-2892644617aaENSP00000496047.1
 
Protein coding
-A0A2R8Y7E2 -CDS 5' incomplete
ENST00000645897.1SPG7-2712593641aaENSP00000495293.1
 
Protein coding
-A0A2R8Y6K2 -GENCODE basic
ENST00000643649.1SPG7-2402507758aaENSP00000494806.1
 
Protein coding
-A0A2R8YDQ1 -GENCODE basic
ENST00000646716.1SPG7-2852264493aaENSP00000495593.1
 
Protein coding
-A0A2R8YEH4 -GENCODE basic
ENST00000646445.1SPG7-2791890415aaENSP00000496434.1
 
Protein coding
-A0A2R8YGZ0 -CDS 5' incomplete
ENST00000643307.1SPG7-2341794507aaENSP00000495673.1
 
Protein coding
-A0A2R8Y729 -GENCODE basic
ENST00000567138.3SPG7-2161376114aaENSP00000483351.2
 
Protein coding
-A0A087X0F5 -TSL:2CDS 5' incomplete
ENST00000565891.2SPG7-21280781aaENSP00000495004.1
 
Protein coding
-A0A2R8YDW8 -TSL:2CDS 5' incomplete
ENST00000566371.6SPG7-214740238aaENSP00000454475.2
 
Protein coding
-H3BMP1 -TSL:3CDS 3' incomplete
ENST00000646263.1SPG7-2763401489aaENSP00000494119.1
 
Nonsense mediated decay
CCDS10978Q9UQ90-2 --
ENST00000646930.1SPG7-2874321463aaENSP00000495219.1
 
Nonsense mediated decay
-A0A2R8Y632 --
ENST00000644901.1SPG7-2594288278aaENSP00000493797.1
 
Nonsense mediated decay
-A0A2R8Y4L0 --
ENST00000644498.1SPG7-2534255456aaENSP00000496244.1
 
Nonsense mediated decay
-A0A2R8Y7N2 --
ENST00000642334.1SPG7-2264100421aaENSP00000496403.1
 
Nonsense mediated decay
-A0A2R8YFF4 -CDS 5' incomplete
ENST00000643954.1SPG7-2443938383aaENSP00000493826.1
 
Nonsense mediated decay
-A0A2R8Y4M0 -CDS 5' incomplete
ENST00000643668.1SPG7-2413851164aaENSP00000494903.1
 
Nonsense mediated decay
-A0A2R8YDU1 --
ENST00000646399.1SPG7-2783776358aaENSP00000495734.1
 
Nonsense mediated decay
-A0A2R8YG79 -CDS 5' incomplete
ENST00000643105.1SPG7-2323748485aaENSP00000495260.1
 
Nonsense mediated decay
-A0A2R8Y6E8 -CDS 5' incomplete
ENST00000645042.1SPG7-2613367511aaENSP00000493908.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000569820.6SPG7-222331370aaENSP00000454805.1
 
Nonsense mediated decay
-H3BNE4 -TSL:5CDS 5' incomplete
ENST00000646826.1SPG7-2863249511aaENSP00000495123.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000646531.1SPG7-2813216511aaENSP00000495185.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000645354.1SPG7-2642922250aaENSP00000494158.1
 
Nonsense mediated decay
-A0A2R8Y4L7 -CDS 5' incomplete
ENST00000643724.1SPG7-2422882258aaENSP00000496335.1
 
Nonsense mediated decay
-A0A2R8YGV4 --
ENST00000644210.1SPG7-2492817511aaENSP00000495675.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000647227.1SPG7-292267027aaENSP00000495783.1
 
Nonsense mediated decay
-A0A2R8YG90 -CDS 5' incomplete
ENST00000643345.1SPG7-2352665126aaENSP00000493982.1
 
Nonsense mediated decay
-A0A2R8YCU3 --
ENST00000646589.1SPG7-2832565128aaENSP00000494739.1
 
Nonsense mediated decay
-A0A2R8YDM8 --
ENST00000645886.1SPG7-2702537206aaENSP00000494111.1
 
Nonsense mediated decay
-A0A2R8Y4Z7 -CDS 5' incomplete
ENST00000644751.1SPG7-2572233320aaENSP00000493934.1
 
Nonsense mediated decay
-A0A2R8Y4M8 -CDS 5' incomplete
ENST00000566682.2SPG7-2151321357aaENSP00000461979.2
 
Nonsense mediated decay
-J3KRF6 -TSL:3CDS 5' incomplete
ENST00000564409.2SPG7-2101314181aaENSP00000495297.1
 
Nonsense mediated decay
-A0A2R8YFN9 -TSL:3CDS 5' incomplete
ENST00000642371.1SPG7-2271289208aaENSP00000495352.1
 
Nonsense mediated decay
-A0A2R8YFQ9 -CDS 5' incomplete
ENST00000645533.1SPG7-2661225339aaENSP00000495690.1
 
Nonsense mediated decay
-A0A2R8Y6Z7 --
ENST00000561911.5SPG7-2041025210aaENSP00000457387.1
 
Nonsense mediated decay
-H3BTY6 -TSL:5CDS 5' incomplete
ENST00000645258.1SPG7-263986107aaENSP00000496510.1
 
Nonsense mediated decay
-A0A2R8Y856 -CDS 5' incomplete
ENST00000643957.1SPG7-245936107aaENSP00000494246.1
 
Nonsense mediated decay
-A0A2R8Y530 -CDS 5' incomplete
ENST00000566221.5SPG7-213734106aaENSP00000457298.1
 
Nonsense mediated decay
-H3BTR8 -TSL:3CDS 5' incomplete
ENST00000643370.1SPG7-237726162aaENSP00000494895.1
 
Nonsense mediated decay
-A0A2R8Y617 -CDS 5' incomplete
ENST00000644044.1SPG7-24651656aaENSP00000494000.1
 
Nonsense mediated decay
-A0A2R8YDS3 -CDS 5' incomplete
ENST00000611189.2SPG7-2235423No protein-
 
Processed transcript
---TSL:NA
ENST00000643496.1SPG7-2392859No protein-
 
Processed transcript
----
ENST00000645842.1SPG7-2692742No protein-
 
Processed transcript
----
ENST00000643350.1SPG7-2362475No protein-
 
Processed transcript
----
ENST00000645742.1SPG7-2671677No protein-
 
Processed transcript
----
ENST00000568509.3SPG7-2191632No protein-
 
Processed transcript
---TSL:2
ENST00000563783.6SPG7-208931No protein-
 
Processed transcript
---TSL:3
ENST00000646707.1SPG7-284919No protein-
 
Processed transcript
----
ENST00000647239.1SPG7-293821No protein-
 
Processed transcript
----
ENST00000565370.1SPG7-211686No protein-
 
Processed transcript
---TSL:3
ENST00000643178.1SPG7-233669No protein-
 
Processed transcript
----
ENST00000569363.2SPG7-220617No protein-
 
Processed transcript
---TSL:2
ENST00000568151.1SPG7-217544No protein-
 
Processed transcript
---TSL:4
ENST00000642436.1SPG7-229422No protein-
 
Processed transcript
----
ENST00000644556.1SPG7-254323No protein-
 
Processed transcript
----
ENST00000644748.1SPG7-2566369No protein-
 
Retained intron
----
ENST00000643734.1SPG7-2434754No protein-
 
Retained intron
----
ENST00000644225.1SPG7-2504581No protein-
 
Retained intron
----
ENST00000647476.1SPG7-2954252No protein-
 
Retained intron
----
ENST00000645977.1SPG7-2744168No protein-
 
Retained intron
----
ENST00000644171.1SPG7-2483802No protein-
 
Retained intron
----
ENST00000561702.6SPG7-2033729No protein-
 
Retained intron
---TSL:2
ENST00000644281.1SPG7-2513728No protein-
 
Retained intron
----
ENST00000647302.1SPG7-2943692No protein-
 
Retained intron
----
ENST00000643409.1SPG7-2383475No protein-
 
Retained intron
----
ENST00000645392.1SPG7-2653384No protein-
 
Retained intron
----
ENST00000644464.1SPG7-2523119No protein-
 
Retained intron
----
ENST00000642226.1SPG7-2243110No protein-
 
Retained intron
----
ENST00000647123.1SPG7-2912991No protein-
 
Retained intron
----
ENST00000644930.1SPG7-2602969No protein-
 
Retained intron
----
ENST00000646958.1SPG7-2882931No protein-
 
Retained intron
----
ENST00000564047.2SPG7-2092893No protein-
 
Retained intron
---TSL:2
ENST00000646005.1SPG7-2752796No protein-
 
Retained intron
----
ENST00000647491.1SPG7-2962788No protein-
 
Retained intron
----
ENST00000642984.1SPG7-2312765No protein-
 
Retained intron
----
ENST00000645952.1SPG7-2732668No protein-
 
Retained intron
----
ENST00000646543.1SPG7-2822626No protein-
 
Retained intron
----
ENST00000645944.1SPG7-2722249No protein-
 
Retained intron
----
ENST00000642814.1SPG7-2302245No protein-
 
Retained intron
----
ENST00000562775.2SPG7-2061534No protein-
 
Retained intron
---TSL:1
ENST00000569720.2SPG7-2211403No protein-
 
Retained intron
---TSL:2
ENST00000642427.1SPG7-2281317No protein-
 
Retained intron
----
ENST00000642263.1SPG7-2251178No protein-
 
Retained intron
----
ENST00000646454.1SPG7-2801060No protein-
 
Retained intron
----
ENST00000563218.6SPG7-207976No protein-
 
Retained intron
---TSL:5
ENST00000561945.2SPG7-205803No protein-
 
Retained intron
---TSL:3
ENST00000644061.1SPG7-247526No protein-
 
Retained intron
----
ENST00000568205.1SPG7-218463No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 6, Coding exons: 4, Transcript length: 726 bps, Translation length: 162 residues

Incomplete CDS

CDS 5' incomplete

Version

ENST00000643370.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

Transcript-based displays

    HASH(0x28e6b420)