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Description

keratin 18 [Source:MGI Symbol;Acc:MGI:96692]

Gene Synonyms

CK18, Endo B, K18, Krt1-18

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000023803.8Krt18-2011437423aaENSMUSP00000023803.7
 
Protein coding
CCDS27869P05784 GENCODE basicAPPRIS P1TSL:1
Description

pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]

Gene Synonyms

GEF720, KIAA0720, Syx, Tech

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000377728.8PLEKHG5-20335801006aaENSP00000366957.3
 
Protein coding
CCDS79O94827-5 NM_020631.6MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:2
ENST00000377740.5PLEKHG5-20541911006aaENSP00000366969.4
 
Protein coding
CCDS79O94827-5 -GENCODE basicAPPRIS P3TSL:1
ENST00000340850.10PLEKHG5-20136991006aaENSP00000344570.5
 
Protein coding
CCDS79O94827-5 -GENCODE basicAPPRIS P3TSL:5
ENST00000535355.6PLEKHG5-21136951075aaENSP00000441445.1
 
Protein coding
CCDS57968O94827-7 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000400913.6PLEKHG5-20736681006aaENSP00000383704.1
 
Protein coding
CCDS79O94827-5 -GENCODE basicAPPRIS P3TSL:5
ENST00000675694.1PLEKHG5-22336371006aaENSP00000501925.1
 
Protein coding
CCDS79O94827-5 -GENCODE basicAPPRIS P3
ENST00000377725.5PLEKHG5-2023475930aaENSP00000366954.1
 
Protein coding
CCDS57967O94827-4 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000673471.2PLEKHG5-21337591105aaENSP00000500749.1
 
Protein coding
-A0A5F9ZHW8 -GENCODE basicAPPRIS ALT2
ENST00000377732.5PLEKHG5-20437531043aaENSP00000366961.1
 
Protein coding
-O94827-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000400915.8PLEKHG5-20837311043aaENSP00000383706.4
 
Protein coding
-O94827-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000377748.6PLEKHG5-20636891064aaENSP00000366977.2
 
Protein coding
-A0A7I2PMD6 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000537245.6PLEKHG5-21233811043aaENSP00000439625.2
 
Protein coding
-O94827-3 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000675123.1PLEKHG5-2192708775aaENSP00000502132.1
 
Protein coding
-A0A6Q8PG76 -GENCODE basicAPPRIS ALT2
ENST00000675976.1PLEKHG5-225954295aaENSP00000501611.1
 
Protein coding
-A0A6Q8PF22 -CDS 5' incomplete
ENST00000675812.1PLEKHG5-2245936aaENSP00000501842.1
 
Protein coding
---CDS 3' incomplete
ENST00000676287.1PLEKHG5-227543104aaENSP00000502810.1
 
Protein coding
-A0A6Q8PHR5 -CDS 3' incomplete
ENST00000675093.1PLEKHG5-218512105aaENSP00000502687.1
 
Protein coding
-A0A6Q8PHJ1 -CDS 3' incomplete
ENST00000674790.1PLEKHG5-215388661aaENSP00000502815.1
 
Nonsense mediated decay
-A0A6Q8PHS0 --
ENST00000675548.1PLEKHG5-2213700118aaENSP00000502684.1
 
Nonsense mediated decay
-A0A6Q8PHD3 --
ENST00000676255.1PLEKHG5-22640152aaENSP00000502459.1
 
Nonsense mediated decay
-A0A6Q8PGZ5 -CDS 5' incomplete
ENST00000674685.1PLEKHG5-214582No protein-
 
Processed transcript
----
ENST00000675655.1PLEKHG5-222565No protein-
 
Processed transcript
----
ENST00000676362.1PLEKHG5-228547No protein-
 
Processed transcript
----
ENST00000489097.6PLEKHG5-2103938No protein-
 
Retained intron
---TSL:2
ENST00000487949.4PLEKHG5-2092664No protein-
 
Retained intron
---TSL:2
ENST00000676401.1PLEKHG5-229612No protein-
 
Retained intron
----
ENST00000674803.1PLEKHG5-216454No protein-
 
Retained intron
----
ENST00000674943.1PLEKHG5-217442No protein-
 
Retained intron
----
ENST00000675139.1PLEKHG5-220341No protein-
 
Retained intron
----
Description

tRNA splicing endonuclease subunit 54 [Source:HGNC Symbol;Acc:HGNC:27561]

Gene Synonyms

SEN54, SEN54L

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000333213.11TSEN54-2011937526aaENSP00000327487.6
 
Protein coding
CCDS11724Q7Z6J9-1 NM_207346.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000680999.1TSEN54-2192093597aaENSP00000504984.1
 
Protein coding
---GENCODE basic
ENST00000545228.3TSEN54-2032063562aaENSP00000438169.3
 
Protein coding
-J9JIH8 -GENCODE basicTSL:5
ENST00000434205.8TSEN54-2022010425aaENSP00000406559.4
 
Protein coding
-E7EN92 -GENCODE basicTSL:5
ENST00000679928.1TSEN54-2173048192aaENSP00000506071.1
 
Nonsense mediated decay
----
ENST00000681282.1TSEN54-2202895260aaENSP00000506339.1
 
Nonsense mediated decay
----
ENST00000679782.1TSEN54-2152082500aaENSP00000505995.1
 
Nonsense mediated decay
----
ENST00000679429.1TSEN54-2131921177aaENSP00000505403.1
 
Nonsense mediated decay
----
ENST00000583818.2TSEN54-211870177aaENSP00000461928.2
 
Nonsense mediated decay
-J3KRC5 -TSL:5
ENST00000583173.5TSEN54-208798178aaENSP00000463619.1
 
Nonsense mediated decay
-J3QLM6 -TSL:5
ENST00000679370.1TSEN54-2123414No protein-
 
Retained intron
----
ENST00000580013.6TSEN54-2073036No protein-
 
Retained intron
---TSL:4
ENST00000579449.2TSEN54-2062632No protein-
 
Retained intron
---TSL:2
ENST00000680528.1TSEN54-2182555No protein-
 
Retained intron
----
ENST00000679919.1TSEN54-2162138No protein-
 
Retained intron
----
ENST00000679443.1TSEN54-2141936No protein-
 
Retained intron
----
ENST00000577197.2TSEN54-2041100No protein-
 
Retained intron
---TSL:2
ENST00000578415.1TSEN54-205994No protein-
 
Retained intron
---TSL:3
ENST00000583454.1TSEN54-209733No protein-
 
Retained intron
---TSL:3
ENST00000583634.1TSEN54-210282No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,895 bps, Translation length: 260 residues

Version

ENST00000681282.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

Transcript-based displays

    HASH(0x28b51618)