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Description

CLN3 lysosomal/endosomal transmembrane protein, battenin [Source:HGNC Symbol;Acc:HGNC:2074]

Gene Synonyms

BTN1, BTS, JNCL

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000636147.2CLN3-2431685438aaENSP00000490105.1
 
Protein coding
CCDS10632Q13286-1 NM_001042432.2MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000569430.7CLN3-2385765438aaENSP00000454229.1
 
Protein coding
CCDS10632Q13286-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000359984.12CLN3-2051876438aaENSP00000353073.9
 
Protein coding
CCDS10632Q13286-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000360019.8CLN3-2061841414aaENSP00000353116.3
 
Protein coding
CCDS73855Q13286-7 -GENCODE basicTSL:2
ENST00000357857.14CLN3-2041720384aaENSP00000350523.9
 
Protein coding
CCDS73854B4DFF3 -GENCODE basicTSL:2
ENST00000333496.14CLN3-2011608414aaENSP00000329171.9
 
Protein coding
CCDS73855Q13286-7 -GENCODE basicTSL:5
ENST00000567963.6CLN3-2291452384aaENSP00000455387.2
 
Protein coding
CCDS73854B4DFF3 -GENCODE basicTSL:5
ENST00000357806.11CLN3-2031469339aaENSP00000350457.7
 
Protein coding
-Q13286-6 -GENCODE basicTSL:1
ENST00000395653.9CLN3-2071430285aaENSP00000379014.5
 
Protein coding
-F6TI76 -GENCODE basicTSL:5
ENST00000565316.6CLN3-2161318421aaENSP00000456117.1
 
Protein coding
-Q13286-3 -GENCODE basicTSL:1
ENST00000637100.1CLN3-2541284370aaENSP00000490394.1
 
Protein coding
-A0A1B0GV71 -GENCODE basicTSL:5
ENST00000636228.1CLN3-2451224336aaENSP00000489627.1
 
Protein coding
-O95086 -GENCODE basicTSL:1
ENST00000355477.10CLN3-2021173390aaENSP00000347660.7
 
Protein coding
-Q13286-2 -GENCODE basicTSL:1
ENST00000635973.1CLN3-2421084269aaENSP00000490363.1
 
Protein coding
-A0A1B0GV41 -TSL:5CDS 3' incomplete
ENST00000568443.2CLN3-232969228aaENSP00000454899.2
 
Protein coding
-H3BNK7 -TSL:3CDS 3' incomplete
ENST00000568497.6CLN3-23575828aaENSP00000456414.2
 
Protein coding
-H3BRU8 -TSL:3CDS 3' incomplete
ENST00000565778.6CLN3-219688167aaENSP00000458015.1
 
Protein coding
-O95090 -TSL:1CDS 3' incomplete
ENST00000565688.5CLN3-218650176aaENSP00000456122.1
 
Protein coding
-H3BR84 -TSL:3CDS 3' incomplete
ENST00000568558.6CLN3-236634176aaENSP00000455603.2
 
Protein coding
-H3BQ48 -TSL:5CDS 3' incomplete
ENST00000567804.1CLN3-22855774aaENSP00000455365.1
 
Protein coding
-H3BPL0 -TSL:4CDS 3' incomplete
ENST00000637107.1CLN3-2551946182aaENSP00000490248.1
 
Nonsense mediated decay
-A0A1B0GUU4 -TSL:5
ENST00000637184.1CLN3-2571753363aaENSP00000489952.1
 
Nonsense mediated decay
-A0A1B0GW34 -TSL:5
ENST00000637871.1CLN3-2611606131aaENSP00000490670.1
 
Nonsense mediated decay
-Q9UP10 -TSL:5
ENST00000637578.1CLN3-258157777aaENSP00000490206.1
 
Nonsense mediated decay
-A0A1B0GUB1 -TSL:2
ENST00000636172.1CLN3-2441536131aaENSP00000490505.1
 
Nonsense mediated decay
-Q9UP10 -TSL:2
ENST00000635861.1CLN3-240140477aaENSP00000490034.1
 
Nonsense mediated decay
-A0A1B0GUB1 -TSL:5
ENST00000637699.1CLN3-2601228181aaENSP00000490049.1
 
Nonsense mediated decay
-Q9UBD8 -TSL:2
ENST00000565140.5CLN3-2141225181aaENSP00000455342.1
 
Nonsense mediated decay
-Q9UBD8 -TSL:2
ENST00000628023.3CLN3-239118382aaENSP00000486178.1
 
Nonsense mediated decay
-A0A0D9SF04 -TSL:5
ENST00000568422.6CLN3-2311168181aaENSP00000455549.2
 
Nonsense mediated decay
-Q9UBD8 -TSL:5
ENST00000569030.5CLN3-2371109253aaENSP00000454680.1
 
Nonsense mediated decay
-Q13286-5 -TSL:2
ENST00000566057.5CLN3-221931105aaENSP00000456693.1
 
Nonsense mediated decay
-Q9UBH5 -TSL:1
ENST00000564091.6CLN3-211790218aaENSP00000454466.2
 
Nonsense mediated decay
-H3BMN4 -TSL:5CDS 5' incomplete
ENST00000567495.6CLN3-227769155aaENSP00000456013.2
 
Nonsense mediated decay
-H3BR00 -TSL:5
ENST00000637985.1CLN3-26276452aaENSP00000490932.1
 
Nonsense mediated decay
-A0A1B0GWH8 -TSL:5
ENST00000561505.2CLN3-20849553aaENSP00000457615.2
 
Nonsense mediated decay
-H3BUF8 -TSL:1
ENST00000636355.1CLN3-247975No protein-
 
Processed transcript
---TSL:5
ENST00000567160.1CLN3-226616No protein-
 
Processed transcript
---TSL:4
ENST00000565236.1CLN3-215582No protein-
 
Processed transcript
---TSL:3
ENST00000566816.1CLN3-224570No protein-
 
Processed transcript
---TSL:4
ENST00000637110.1CLN3-256565No protein-
 
Processed transcript
---TSL:5
ENST00000566472.1CLN3-223551No protein-
 
Processed transcript
---TSL:4
ENST00000566040.1CLN3-220544No protein-
 
Processed transcript
---TSL:4
ENST00000637686.1CLN3-259533No protein-
 
Processed transcript
---TSL:5
ENST00000565047.1CLN3-213461No protein-
 
Processed transcript
---TSL:1
ENST00000563874.5CLN3-2103081No protein-
 
Retained intron
---TSL:2
ENST00000636977.1CLN3-2522969No protein-
 
Retained intron
---TSL:5
ENST00000636853.1CLN3-2502289No protein-
 
Retained intron
---TSL:5
ENST00000636839.1CLN3-2492018No protein-
 
Retained intron
---TSL:5
ENST00000568076.6CLN3-2301968No protein-
 
Retained intron
---TSL:5
ENST00000561689.6CLN3-2091957No protein-
 
Retained intron
---TSL:2
ENST00000635958.1CLN3-2411837No protein-
 
Retained intron
---TSL:5
ENST00000637050.1CLN3-2531684No protein-
 
Retained intron
---TSL:5
ENST00000636907.1CLN3-2511679No protein-
 
Retained intron
---TSL:2
ENST00000568452.6CLN3-2331616No protein-
 
Retained intron
---TSL:5
ENST00000566083.6CLN3-2221409No protein-
 
Retained intron
---TSL:2
ENST00000566824.6CLN3-2251326No protein-
 
Retained intron
---TSL:5
ENST00000636351.1CLN3-2461292No protein-
 
Retained intron
---TSL:5
ENST00000564574.5CLN3-2121159No protein-
 
Retained intron
---TSL:2
ENST00000568472.6CLN3-2341011No protein-
 
Retained intron
---TSL:3
ENST00000636685.1CLN3-248801No protein-
 
Retained intron
---TSL:5
ENST00000565354.5CLN3-217759No protein-
 
Retained intron
---TSL:5
Description

septin 2 [Source:HGNC Symbol;Acc:HGNC:7729]

Gene Synonyms

DIFF6, KIAA0158, NEDD5, Pnutl3, SEPT2, hNedd5

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000391971.7SEPTIN2-2033251361aaENSP00000375832.2
 
Protein coding
CCDS2548Q15019-1 NM_004404.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000391973.6SEPTIN2-2043701361aaENSP00000375834.2
 
Protein coding
CCDS2548Q15019-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000360051.7SEPTIN2-2013613361aaENSP00000353157.3
 
Protein coding
CCDS2548Q15019-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000616972.4SEPTIN2-2453446396aaENSP00000479861.1
 
Protein coding
CCDS74682Q15019-2 -GENCODE basicTSL:2
ENST00000402092.6SEPTIN2-2063333361aaENSP00000385172.2
 
Protein coding
CCDS2548Q15019-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000407971.5SEPTIN2-2083267321aaENSP00000384525.1
 
Protein coding
CCDS86930B5MCX3 -GENCODE basicTSL:5
ENST00000401990.5SEPTIN2-2051734371aaENSP00000385109.1
 
Protein coding
CCDS63195Q15019-3 -GENCODE basicTSL:1
ENST00000428282.5SEPTIN2-2131005184aaENSP00000397195.1
 
Protein coding
-C9J2Q4 -TSL:3CDS 3' incomplete
ENST00000421717.1SEPTIN2-211818188aaENSP00000408296.1
 
Protein coding
-H7C2Y0 -TSL:4CDS 5' incomplete
ENST00000451310.1SEPTIN2-22380129aaENSP00000402256.1
 
Protein coding
-H7C1T1 -TSL:2CDS 5' incomplete
ENST00000436795.5SEPTIN2-217775148aaENSP00000406181.1
 
Protein coding
-C9J938 -TSL:5CDS 3' incomplete
ENST00000429791.5SEPTIN2-21572422aaENSP00000404417.1
 
Protein coding
-C9JG93 -TSL:4CDS 3' incomplete
ENST00000407017.5SEPTIN2-20765094aaENSP00000386001.1
 
Protein coding
-B5MD47 -TSL:4CDS 3' incomplete
ENST00000428524.5SEPTIN2-21464450aaENSP00000389174.1
 
Protein coding
-C9JT15 -TSL:5CDS 3' incomplete
ENST00000449239.5SEPTIN2-222599173aaENSP00000391717.1
 
Protein coding
-C9JB25 -TSL:2CDS 3' incomplete
ENST00000445030.5SEPTIN2-22157572aaENSP00000404484.1
 
Protein coding
-C9JFT1 -TSL:3CDS 3' incomplete
ENST00000437066.5SEPTIN2-218574131aaENSP00000412434.1
 
Protein coding
-C9IZU3 -TSL:4CDS 3' incomplete
ENST00000411484.5SEPTIN2-209561147aaENSP00000394666.1
 
Protein coding
-C9JQJ4 -TSL:4CDS 3' incomplete
ENST00000443492.5SEPTIN2-220558121aaENSP00000399195.1
 
Protein coding
-C9IY94 -TSL:5CDS 3' incomplete
ENST00000420786.5SEPTIN2-21053952aaENSP00000409596.1
 
Protein coding
-C9JSE7 -TSL:5CDS 3' incomplete
ENST00000457874.1SEPTIN2-225484161aaENSP00000408902.1
 
Protein coding
-H7C310 -TSL:3CDS 5' and 3' incomplete
ENST00000434955.5SEPTIN2-216480105aaENSP00000399767.1
 
Protein coding
-C9JZI2 -TSL:3CDS 3' incomplete
ENST00000441533.5SEPTIN2-21937271aaENSP00000413031.1
 
Protein coding
-A0A1B0GXJ2 -TSL:5CDS 3' incomplete
ENST00000425899.5SEPTIN2-21273874aaENSP00000403287.1
 
Nonsense mediated decay
-F8WCX3 -TSL:5
ENST00000457335.5SEPTIN2-22457080aaENSP00000397290.1
 
Nonsense mediated decay
-F8WB65 -TSL:4
ENST00000461048.5SEPTIN2-2261163No protein-
 
Processed transcript
---TSL:1
ENST00000492978.5SEPTIN2-242775No protein-
 
Processed transcript
---TSL:3
ENST00000366210.2SEPTIN2-202672No protein-
 
Processed transcript
---TSL:3
ENST00000466211.5SEPTIN2-229584No protein-
 
Processed transcript
---TSL:3
ENST00000462147.5SEPTIN2-227576No protein-
 
Processed transcript
---TSL:4
ENST00000494824.5SEPTIN2-243565No protein-
 
Processed transcript
---TSL:5
ENST00000464128.5SEPTIN2-228565No protein-
 
Processed transcript
---TSL:4
ENST00000495463.5SEPTIN2-244501No protein-
 
Processed transcript
---TSL:4
ENST00000469175.5SEPTIN2-231486No protein-
 
Processed transcript
---TSL:3
ENST00000475823.5SEPTIN2-235371No protein-
 
Processed transcript
---TSL:3
ENST00000484648.1SEPTIN2-240218No protein-
 
Processed transcript
---TSL:3
ENST00000481500.1SEPTIN2-237756No protein-
 
Retained intron
---TSL:2
ENST00000475474.5SEPTIN2-234749No protein-
 
Retained intron
---TSL:2
ENST00000482304.5SEPTIN2-238740No protein-
 
Retained intron
---TSL:2
ENST00000484167.5SEPTIN2-239668No protein-
 
Retained intron
---TSL:2
ENST00000473479.5SEPTIN2-233659No protein-
 
Retained intron
---TSL:2
ENST00000469434.5SEPTIN2-232583No protein-
 
Retained intron
---TSL:3
ENST00000467971.5SEPTIN2-230571No protein-
 
Retained intron
---TSL:2
ENST00000484740.1SEPTIN2-241563No protein-
 
Retained intron
---TSL:3
ENST00000476841.1SEPTIN2-236304No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 2, Coding exons: 1, Transcript length: 801 bps, Translation length: 29 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

CDS 5' incomplete

Version

ENST00000451310.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x36869048)