Human (GRCh38.p14)
Description

solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]

Gene Synonyms

GABATHG, GABATR, GAT-1, GAT1, HGAT-1

Location
About this transcript

This transcript has 16 exons, is annotated with 37 domains and features, is associated with 21236 variant alleles and maps to 607 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000287766.10SLC6A1-2014478599aaENSP00000287766.4
 
Protein coding
CCDS2603A0A024R2K8 P30531 NM_003042.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000643396.1SLC6A1-2156767599aaENSP00000494136.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000645974.1SLC6A1-2274764599aaENSP00000496390.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000646570.1SLC6A1-2354727599aaENSP00000496064.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000642515.1SLC6A1-2074720599aaENSP00000496348.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000642820.1SLC6A1-2124629599aaENSP00000495900.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000645054.1SLC6A1-2214612599aaENSP00000495751.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000646060.1SLC6A1-2314594599aaENSP00000496302.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000642735.1SLC6A1-2094577599aaENSP00000494050.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000646924.1SLC6A1-2394541599aaENSP00000493591.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000645029.1SLC6A1-2204453599aaENSP00000496171.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000642767.1SLC6A1-2114437599aaENSP00000494346.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000646702.1SLC6A1-2364343599aaENSP00000496697.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000643498.1SLC6A1-2164341599aaENSP00000494997.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000645592.1SLC6A1-2244324599aaENSP00000496619.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000646022.1SLC6A1-2294282599aaENSP00000494134.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000647194.1SLC6A1-2404226599aaENSP00000496238.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000642201.1SLC6A1-2064174599aaENSP00000494778.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000698198.1SLC6A1-2424161623aaENSP00000513602.1
 
Protein coding
A0A8V8TMZ9 -GENCODE basic
ENST00000644314.1SLC6A1-2184129479aaENSP00000493813.1
 
Protein coding
CCDS87043A0A2R8Y4I3 -GENCODE basic
ENST00000644803.1SLC6A1-2194093608aaENSP00000494469.1
 
Protein coding
A0A2R8YDD5 -GENCODE basic
ENST00000646072.1SLC6A1-2324078421aaENSP00000494002.1
 
Protein coding
CCDS87044B7Z3C5 -GENCODE basic
ENST00000646487.1SLC6A1-2343984458aaENSP00000496768.1
 
Protein coding
A0A2R8Y867 -GENCODE basic
ENST00000642639.1SLC6A1-2083934599aaENSP00000494191.1
 
Protein coding
CCDS2603A0A024R2K8 P30531 -GENCODE basicAPPRIS P1
ENST00000645281.1SLC6A1-2223931421aaENSP00000493746.1
 
Protein coding
CCDS87044B7Z3C5 -GENCODE basic
ENST00000645776.1SLC6A1-2263486421aaENSP00000495375.1
 
Protein coding
CCDS87044B7Z3C5 -GENCODE basic
ENST00000647384.1SLC6A1-2412636380aaENSP00000493779.1
 
Protein coding
A0A2R8YCM3 -GENCODE basic
ENST00000646088.1SLC6A1-2331711184aaENSP00000494608.1
 
Protein coding
A0A2R8Y495 -GENCODE basic
ENST00000644175.1SLC6A1-2171694184aaENSP00000493788.1
 
Protein coding
A0A2R8Y495 -GENCODE basic
ENST00000645985.1SLC6A1-2281545515aaENSP00000494893.1
 
Protein coding
A0A2R8YF74 -CDS 5' and 3' incomplete
ENST00000425938.6SLC6A1-202957125aaENSP00000411689.2
 
Protein coding
C9J5P8 -TSL:2CDS 3' incomplete
ENST00000645575.1SLC6A1-2231834171aaENSP00000493666.1
 
Nonsense mediated decay
A0A2R8Y3X2 --
ENST00000460480.2SLC6A1-2031164162aaENSP00000494289.1
 
Nonsense mediated decay
A0A2R8YEF0 -TSL:4
ENST00000643326.1SLC6A1-214557112aaENSP00000496465.1
 
Nonsense mediated decay
A0A2R8YFI0 -CDS 5' incomplete
ENST00000646886.1SLC6A1-2386350No protein-
 
Retained intron
---
ENST00000642766.1SLC6A1-2105528No protein-
 
Retained intron
---
ENST00000495636.2SLC6A1-2054025No protein-
 
Retained intron
--TSL:2
ENST00000646836.1SLC6A1-2373056No protein-
 
Retained intron
---
ENST00000462473.2SLC6A1-2042887No protein-
 
Retained intron
--TSL:3
ENST00000646035.1SLC6A1-2302873No protein-
 
Retained intron
---
ENST00000642831.1SLC6A1-2132310No protein-
 
Retained intron
---
ENST00000645598.1SLC6A1-2252008No protein-
 
Retained intron
---
Statistics

Exons: 16, Coding exons: 14, Transcript length: 4,478 bps, Translation length: 599 residues

MANE

This MANE Select transcript contains ENSP00000287766 and matches to NM_003042.4 and NP_003033.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: P30531

CCDS

This transcript is a member of the Human CCDS set: CCDS2603

Transcript Support Level (TSL)

TSL:1

Version

ENST00000287766.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.