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EnsemblEnsembl Home
Description

protocadherin 15 [Source:MGI Symbol;Acc:MGI:1891428]

Gene Synonyms

Gm9815, Ush1f, nmf19, roda

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000191854.6Pcdh15-23491041677aaENSMUSP00000141973.2
 
Protein coding
CCDS56717Q99PJ1-19 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000193361.6Pcdh15-23778811943aaENSMUSP00000141792.2
 
Protein coding
CCDS35934Q99PJ1-1 GENCODE basicTSL:5
ENSMUST00000105424.10Pcdh15-20369321938aaENSMUSP00000101064.4
 
Protein coding
CCDS56715Q99PJ1-2 GENCODE basicTSL:5
ENSMUST00000131321.9Pcdh15-21569261936aaENSMUSP00000122911.3
 
Protein coding
CCDS56718Q99PJ1-4 GENCODE basicTSL:1
ENSMUST00000092420.13Pcdh15-20269171933aaENSMUSP00000090076.7
 
Protein coding
CCDS48594Q99PJ1-6 GENCODE basicTSL:1
ENSMUST00000126920.9Pcdh15-21168661916aaENSMUSP00000121939.3
 
Protein coding
CCDS56720Q99PJ1-8 GENCODE basicTSL:5
ENSMUST00000129404.9Pcdh15-21468571913aaENSMUSP00000117731.3
 
Protein coding
CCDS56721Q99PJ1-9 GENCODE basicTSL:5
ENSMUST00000147189.9Pcdh15-22268061896aaENSMUSP00000122940.3
 
Protein coding
CCDS48595Q99PJ1-7 GENCODE basicTSL:1
ENSMUST00000105426.10Pcdh15-20468021936aaENSMUSP00000101066.5
 
Protein coding
CCDS56718Q99PJ1-4 GENCODE basicTSL:5
ENSMUST00000105429.10Pcdh15-20567191867aaENSMUSP00000101069.4
 
Protein coding
CCDS56719Q99PJ1-5 GENCODE basicTSL:5
ENSMUST00000131724.9Pcdh15-21663221518aaENSMUSP00000122466.3
 
Protein coding
CCDS56716Q99PJ1-11 GENCODE basicTSL:5
ENSMUST00000151116.9Pcdh15-22662871790aaENSMUSP00000119662.3
 
Protein coding
CCDS56711Q99PJ1-10 GENCODE basicTSL:5
ENSMUST00000177107.8Pcdh15-23156961682aaENSMUSP00000135501.2
 
Protein coding
CCDS56713Q99PJ1-18 GENCODE basicAPPRIS P4TSL:5
ENSMUST00000177420.7Pcdh15-23248781176aaENSMUSP00000135849.2
 
Protein coding
CCDS56712Q99PJ1-21 GENCODE basicTSL:1
ENSMUST00000125006.9Pcdh15-20848631171aaENSMUSP00000120056.3
 
Protein coding
CCDS56714Q99PJ1-22 GENCODE basicTSL:1
ENSMUST00000064562.14Pcdh15-20188301865aaENSMUSP00000068561.8
 
Protein coding
-E9Q159 GENCODE basicTSL:5
ENSMUST00000193174.6Pcdh15-23659361783aaENSMUSP00000142238.2
 
Protein coding
-A0A0A6YY17 GENCODE basicTSL:5
ENSMUST00000149977.9Pcdh15-22558431675aaENSMUSP00000118833.4
 
Protein coding
-A0A140T8S2 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000191709.6Pcdh15-23353461781aaENSMUSP00000142313.2
 
Protein coding
-Q99PJ1-25 GENCODE basicTSL:5
ENSMUST00000124046.8Pcdh15-20753361129aaENSMUSP00000121130.2
 
Protein coding
-Q99PJ1-12 GENCODE basicTSL:5
ENSMUST00000195531.6Pcdh15-24152411714aaENSMUSP00000141920.2
 
Protein coding
-A0A0A6YXB5 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000193739.6Pcdh15-23850341677aaENSMUSP00000142173.2
 
Protein coding
-Q99PJ1-26 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000194315.2Pcdh15-23947151333aaENSMUSP00000141594.2
 
Protein coding
-A0A0A6YWL3 TSL:5CDS 5' incomplete
ENSMUST00000152655.9Pcdh15-2273860981aaENSMUSP00000118201.3
 
Protein coding
-Q99PJ1-17 GENCODE basicTSL:1
ENSMUST00000134009.9Pcdh15-2173300650aaENSMUSP00000120618.3
 
Protein coding
-Q99PJ1-23 GENCODE basicTSL:1
ENSMUST00000125517.9Pcdh15-2103074719aaENSMUSP00000115399.3
 
Protein coding
-Q99PJ1-16 GENCODE basicTSL:1
ENSMUST00000152819.9Pcdh15-2282867650aaENSMUSP00000123647.3
 
Protein coding
-Q99PJ1-15 GENCODE basicTSL:1
ENSMUST00000155701.9Pcdh15-2292754334aaENSMUSP00000135495.2
 
Protein coding
-Q99PJ1-14 GENCODE basicTSL:1
ENSMUST00000146682.8Pcdh15-2211891415aaENSMUSP00000134863.2
 
Protein coding
-Q99PJ1-20 GENCODE basicTSL:1
ENSMUST00000125055.9Pcdh15-2096852684aaENSMUSP00000114326.3
 
Nonsense mediated decay
-Q99PJ1-3 TSL:5
ENSMUST00000136096.9Pcdh15-2186846684aaENSMUSP00000121534.3
 
Nonsense mediated decay
-Q99PJ1-3 TSL:2
ENSMUST00000144302.9Pcdh15-2203315326aaENSMUSP00000122606.3
 
Nonsense mediated decay
-Q99PJ1-13 TSL:2
ENSMUST00000127928.7Pcdh15-2123404No protein-
 
Processed transcript
--TSL:1
ENSMUST00000147455.2Pcdh15-2232841No protein-
 
Processed transcript
--TSL:1
ENSMUST00000192370.2Pcdh15-235556No protein-
 
Processed transcript
--TSL:3
ENSMUST00000194729.2Pcdh15-2405272No protein-
 
Retained intron
--TSL:NA
ENSMUST00000148572.2Pcdh15-2242712No protein-
 
Retained intron
--TSL:1
ENSMUST00000123398.9Pcdh15-2062436No protein-
 
Retained intron
--TSL:1
ENSMUST00000156999.2Pcdh15-2301024No protein-
 
Retained intron
--TSL:1
ENSMUST00000128843.2Pcdh15-213691No protein-
 
Retained intron
--TSL:5
ENSMUST00000139106.3Pcdh15-219462No protein-
 
Retained intron
--TSL:2
Description

contactin associated protein-like 1 [Source:MGI Symbol;Acc:MGI:1858201]

Gene Synonyms

AI841080, Caspr, NCP1, Nrxn4, p190, paranodin, shm

Reference strain equivalent
Transcript IDNamebpProteinTranslation IDBiotypeCCDSFlags
MGP_CASTEiJ_T0032021.1-54321387aaMGP_CASTEiJ_P0032021
 
Protein coding
--
MGP_CASTEiJ_T0032019.1-664No protein-
 
Processed transcript
CCDS25455-
MGP_CASTEiJ_T0032022.1-40701280aaMGP_CASTEiJ_P0032022
 
Unknown likely coding
--
Description

G3BP stress granule assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30292]

Gene Synonyms

G3BP, HDH-VIII

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000356245.8G3BP1-20110227466aaENSP00000348578.3
 
Protein coding
CCDS4319Q13283-1 NM_005754.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000677323.1G3BP1-23510540466aaENSP00000502880.1
 
Protein coding
CCDS4319Q13283-1 -GENCODE basicAPPRIS P1
ENST00000394123.7G3BP1-20210240466aaENSP00000377681.3
 
Protein coding
CCDS4319Q13283-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000678925.1G3BP1-27010011466aaENSP00000503699.1
 
Protein coding
CCDS4319Q13283-1 -GENCODE basicAPPRIS P1
ENST00000678101.1G3BP1-2521794466aaENSP00000504140.1
 
Protein coding
CCDS4319Q13283-1 -GENCODE basicAPPRIS P1
ENST00000676827.1G3BP1-2221768466aaENSP00000504627.1
 
Protein coding
CCDS4319Q13283-1 -GENCODE basicAPPRIS P1
ENST00000522761.6G3BP1-2121691466aaENSP00000430480.2
 
Protein coding
CCDS4319Q13283-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000678070.1G3BP1-2501565466aaENSP00000503039.1
 
Protein coding
CCDS4319Q13283-1 -GENCODE basicAPPRIS P1
ENST00000678964.1G3BP1-27110622426aaENSP00000503385.1
 
Protein coding
-A0A7I2YQN9 -GENCODE basic
ENST00000678646.1G3BP1-26210257476aaENSP00000504525.1
 
Protein coding
-A0A7I2V5M7 -GENCODE basic
ENST00000676715.1G3BP1-219860285aaENSP00000503528.1
 
Protein coding
-A0A7I2YQF2 -CDS 5' incomplete
ENST00000520177.6G3BP1-2082654367aaENSP00000427810.2
 
Protein coding
---GENCODE basicTSL:1
ENST00000678910.1G3BP1-2691737134aaENSP00000503654.1
 
Protein coding
-A0A7I2YQH0 -GENCODE basic
ENST00000678564.1G3BP1-2601737426aaENSP00000504156.1
 
Protein coding
-A0A7I2YQN9 -GENCODE basic
ENST00000677105.1G3BP1-2281532476aaENSP00000504722.1
 
Protein coding
-A0A7I2V5M7 -GENCODE basic
ENST00000678854.1G3BP1-2671326170aaENSP00000503080.1
 
Protein coding
-A0A7I2V2S5 -GENCODE basic
ENST00000678657.1G3BP1-2631187158aaENSP00000504393.1
 
Protein coding
-A0A7I2V548 -CDS 5' incomplete
ENST00000676899.1G3BP1-2251054114aaENSP00000504490.1
 
Protein coding
-A0A7I2V5H1 -CDS 5' incomplete
ENST00000677433.1G3BP1-239583151aaENSP00000503142.1
 
Protein coding
-A0A7I2V2V1 -CDS 3' incomplete
ENST00000523519.5G3BP1-213535106aaENSP00000430738.1
 
Protein coding
-E5RIF8 -TSL:4CDS 3' incomplete
ENST00000520578.6G3BP1-209529117aaENSP00000429920.1
 
Protein coding
-E5RH42 -TSL:3CDS 3' incomplete
ENST00000678825.1G3BP1-266436102aaENSP00000504001.1
 
Protein coding
-A0A7I2YQM1 -CDS 5' incomplete
ENST00000678612.1G3BP1-26141161aaENSP00000503802.1
 
Protein coding
-A0A7I2V496 -CDS 5' incomplete
ENST00000677658.1G3BP1-24339054aaENSP00000503905.1
 
Protein coding
-A0A7I2V494 -CDS 5' incomplete
ENST00000676507.1G3BP1-21538649aaENSP00000503184.1
 
Protein coding
-A0A7I2V2X7 -CDS 5' incomplete
ENST00000679135.1G3BP1-275329110aaENSP00000503223.1
 
Protein coding
-A0A7I2V326 -CDS 5' and 3' incomplete
ENST00000677284.1G3BP1-23429931aaENSP00000504125.1
 
Protein coding
-E5RI46 -CDS 3' incomplete
ENST00000677369.1G3BP1-23628431aaENSP00000502976.1
 
Protein coding
-E5RI46 -CDS 3' incomplete
ENST00000520006.2G3BP1-20722931aaENSP00000428469.2
 
Protein coding
-E5RI46 -TSL:5CDS 3' incomplete
ENST00000677687.1G3BP1-24422263aaENSP00000504281.1
 
Protein coding
-A0A7I2YQQ8 -CDS 5' incomplete
ENST00000677608.1G3BP1-24222274aaENSP00000504384.1
 
Protein coding
-A0A7I2V565 -CDS 5' and 3' incomplete
ENST00000678976.1G3BP1-27220631aaENSP00000504139.1
 
Protein coding
-E5RI46 -CDS 3' incomplete
ENST00000677408.1G3BP1-23819431aaENSP00000503087.1
 
Protein coding
-E5RI46 -CDS 3' incomplete
ENST00000627077.2G3BP1-21417331aaENSP00000486887.2
 
Protein coding
-E5RI46 -TSL:5CDS 3' incomplete
ENST00000676978.1G3BP1-2279997466aaENSP00000503939.1
 
Nonsense mediated decay
CCDS4319Q13283-1 --
ENST00000677923.1G3BP1-24810583334aaENSP00000504573.1
 
Nonsense mediated decay
-A0A7I2YQU8 --
ENST00000676644.1G3BP1-2181037256aaENSP00000504249.1
 
Nonsense mediated decay
-A0A7I2V4Y8 --
ENST00000679289.1G3BP1-27810323153aaENSP00000504039.1
 
Nonsense mediated decay
-E5RJU8 --
ENST00000677493.1G3BP1-24010243304aaENSP00000504786.1
 
Nonsense mediated decay
-A0A7I2V651 --
ENST00000677381.1G3BP1-23710136122aaENSP00000504403.1
 
Nonsense mediated decay
-Q13283-2 --
ENST00000678295.1G3BP1-256123368aaENSP00000503775.1
 
Nonsense mediated decay
-A0A7I2YQR4 -CDS 5' incomplete
ENST00000676813.1G3BP1-221104637aaENSP00000502929.1
 
Nonsense mediated decay
-E5RH00 --
ENST00000522666.1G3BP1-21178337aaENSP00000429316.1
 
Nonsense mediated decay
-E5RH00 -TSL:3
ENST00000522367.6G3BP1-210782122aaENSP00000428926.1
 
Nonsense mediated decay
-Q13283-2 -TSL:3
ENST00000676878.1G3BP1-22359368aaENSP00000504118.1
 
Nonsense mediated decay
-A0A7I2YQR4 -CDS 5' incomplete
ENST00000676734.1G3BP1-22059068aaENSP00000504327.1
 
Nonsense mediated decay
-A0A7I2YQR4 -CDS 5' incomplete
ENST00000517947.5G3BP1-20455837aaENSP00000430045.1
 
Nonsense mediated decay
-E5RH00 -TSL:4
ENST00000678500.1G3BP1-25953159aaENSP00000503647.1
 
Nonsense mediated decay
-A0A7I2V3Y4 -CDS 5' incomplete
ENST00000677211.1G3BP1-23152061aaENSP00000503180.1
 
Nonsense mediated decay
-A0A7I2YQB1 -CDS 5' incomplete
ENST00000677146.1G3BP1-23050366aaENSP00000503388.1
 
Nonsense mediated decay
-A0A7I2V3C4 --
ENST00000678372.1G3BP1-25844837aaENSP00000504056.1
 
Nonsense mediated decay
-A0A7I2V533 -CDS 5' incomplete
ENST00000679004.1G3BP1-27335417aaENSP00000503296.1
 
Nonsense mediated decay
-A0A7I2YQC2 -CDS 5' incomplete
ENST00000676590.1G3BP1-21634536aaENSP00000504178.1
 
Nonsense mediated decay
-A0A7I2YQP3 -CDS 5' incomplete
ENST00000677854.1G3BP1-24634149aaENSP00000503694.1
 
Nonsense mediated decay
-A0A7I2V4D8 -CDS 5' incomplete
ENST00000678726.1G3BP1-26433940aaENSP00000502848.1
 
Nonsense mediated decay
-A0A7I2V274 -CDS 5' incomplete
ENST00000678194.1G3BP1-25431139aaENSP00000503653.1
 
Nonsense mediated decay
-A0A7I2V3V2 -CDS 5' incomplete
ENST00000676634.1G3BP1-2171000No protein-
 
Processed transcript
----
ENST00000676911.1G3BP1-226998No protein-
 
Processed transcript
----
ENST00000507878.7G3BP1-203581No protein-
 
Processed transcript
---TSL:4
ENST00000679057.1G3BP1-274192No protein-
 
Processed transcript
----
ENST00000677909.1G3BP1-247177No protein-
 
Processed transcript
----
ENST00000677252.1G3BP1-233148No protein-
 
Processed transcript
----
ENST00000678153.1G3BP1-253125No protein-
 
Processed transcript
----
ENST00000678209.1G3BP1-255125No protein-
 
Processed transcript
----
ENST00000678027.1G3BP1-249125No protein-
 
Processed transcript
----
ENST00000677126.1G3BP1-229125No protein-
 
Processed transcript
----
ENST00000678086.1G3BP1-251114No protein-
 
Processed transcript
----
ENST00000677757.1G3BP1-24511945No protein-
 
Retained intron
----
ENST00000678904.1G3BP1-26810474No protein-
 
Retained intron
----
ENST00000677602.1G3BP1-2413216No protein-
 
Retained intron
----
ENST00000678369.1G3BP1-2573086No protein-
 
Retained intron
----
ENST00000679193.1G3BP1-2762304No protein-
 
Retained intron
----
ENST00000678750.1G3BP1-2651898No protein-
 
Retained intron
----
ENST00000676894.1G3BP1-2241207No protein-
 
Retained intron
----
ENST00000519832.1G3BP1-2061173No protein-
 
Retained intron
---TSL:1
ENST00000518726.5G3BP1-205869No protein-
 
Retained intron
---TSL:1
ENST00000679207.1G3BP1-277782No protein-
 
Retained intron
----
ENST00000677241.1G3BP1-232378No protein-
 
Retained intron
----
Statistics

Exons: 2, Coding exons: 0, Transcript length: 869 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000518726.5

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x317a53a8)