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Description

ataxin 3 [Source:HGNC Symbol;Acc:HGNC:7106]

Gene Synonyms

ATX3, JOS, MJD, SCA3

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ATXN3-254ENST00000644486.26884361aaENSP00000496695.1
 
Protein coding
CCDS9900P54252-2 NM_004993.6MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2
ATXN3-204ENST00000429774.66713291aaENSP00000389376.3
 
Protein coding
CCDS73680C9JQV6 -GENCODE basicTSL:1
ATXN3-207ENST00000503767.51315346aaENSP00000426697.1
 
Protein coding
CCDS45154P54252-4 -GENCODE basicTSL:1
ATXN3-206ENST00000502250.51259182aaENSP00000425322.1
 
Protein coding
CCDS53908P54252-5 -GENCODE basicTSL:1
ATXN3-201ENST00000340660.101205306aaENSP00000339110.6
 
Protein coding
CCDS32143P54252-3 -GENCODE basicTSL:1
ATXN3-215ENST00000545170.56950370aaENSP00000445618.2
 
Protein coding
-F5H211 -GENCODE basicTSL:5
ATXN3-203ENST00000393287.96770310aaENSP00000376965.6
 
Protein coding
-A0A0A0MS38 -GENCODE basicTSL:1
ATXN3-214ENST00000532032.51191364aaENSP00000437157.1
 
Protein coding
-P54252-1 -GENCODE basicAPPRIS ALT2TSL:1
ATXN3-249ENST00000617719.41074301aaENSP00000481998.1
 
Protein coding
-D3VVH9 -GENCODE basicTSL:5
ATXN3-250ENST00000620536.41044324aaENSP00000484016.1
 
Protein coding
-A0A087X1A8 -GENCODE basicTSL:5
ATXN3-227ENST00000554592.51010329aaENSP00000451385.1
 
Protein coding
-G3V3R7 -TSL:1CDS 3' incomplete
ATXN3-251ENST00000621269.4936288aaENSP00000481390.1
 
Protein coding
-A0A087WXY4 -GENCODE basicTSL:5
ATXN3-219ENST00000553491.5857278aaENSP00000451996.1
 
Protein coding
-G3V4U9 -TSL:1CDS 3' incomplete
ATXN3-231ENST00000555381.5803260aaENSP00000451001.1
 
Protein coding
-G3V328 -TSL:1CDS 3' incomplete
ATXN3-235ENST00000556220.5692223aaENSP00000450641.1
 
Protein coding
-G3V2G1 -TSL:1CDS 3' incomplete
ATXN3-228ENST00000554672.6683126aaENSP00000451417.2
 
Protein coding
-G3V3T6 -TSL:1CDS 3' incomplete
ATXN3-209ENST00000506466.5637205aaENSP00000435571.1
 
Protein coding
-E9PJN5 -TSL:3CDS 3' incomplete
ATXN3-213ENST00000526872.3604202aaENSP00000474067.2
 
Protein coding
-S4R399 -TSL:5CDS 5' and 3' incomplete
ATXN3-246ENST00000557311.6559150aaENSP00000450642.2
 
Protein coding
-G3V2G2 -TSL:1CDS 3' incomplete
ATXN3-202ENST00000359366.10257279aaENSP00000352324.5
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ATXN3-257ENST00000647161.11569351aaENSP00000493680.1
 
Nonsense mediated decay
-A0A2R8Y3X7 --
ATXN3-240ENST00000556374.51083114aaENSP00000451399.1
 
Nonsense mediated decay
-G3V3S5 -TSL:1
ATXN3-218ENST00000553488.5106579aaENSP00000452461.1
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ATXN3-243ENST00000556898.5990159aaENSP00000451769.1
 
Nonsense mediated decay
-G3V4F4 -TSL:1
ATXN3-229ENST00000554673.5981161aaENSP00000452356.1
 
Nonsense mediated decay
-G3V5H3 -TSL:5
ATXN3-225ENST00000554350.5943110aaENSP00000451103.1
 
Nonsense mediated decay
-G3V390 -TSL:1
ATXN3-230ENST00000554994.5922150aaENSP00000451771.1
 
Nonsense mediated decay
-G3V4F5 -TSL:1
ATXN3-242ENST00000556671.5921110aaENSP00000451693.1
 
Nonsense mediated decay
-G3V4B1 -TSL:1
ATXN3-236ENST00000556274.591379aaENSP00000451733.1
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ATXN3-237ENST00000556288.590179aaENSP00000450566.1
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ATXN3-238ENST00000556315.684878aaENSP00000451132.1
 
Nonsense mediated decay
-G3V3A6 -TSL:1
ATXN3-245ENST00000557030.6806200aaENSP00000452139.1
 
Nonsense mediated decay
-G3V526 -TSL:1
ATXN3-244ENST00000556958.576999aaENSP00000452532.1
 
Nonsense mediated decay
-D6R9I5 -TSL:1
ATXN3-232ENST00000555816.576079aaENSP00000451910.1
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ATXN3-221ENST00000553570.575795aaENSP00000451405.1
 
Nonsense mediated decay
-G3V3T0 -TSL:1
ATXN3-256ENST00000646485.168287aaENSP00000496590.1
 
Nonsense mediated decay
-A0A2R8Y888 --
ATXN3-212ENST00000515746.661899aaENSP00000422073.1
 
Nonsense mediated decay
-D6R9I5 -TSL:5
ATXN3-234ENST00000556082.658779aaENSP00000450492.1
 
Nonsense mediated decay
-D3VVP3 -TSL:1
ATXN3-252ENST00000642417.11098No protein-
 
Processed transcript
----
ATXN3-226ENST00000554491.51064No protein-
 
Processed transcript
---TSL:1
ATXN3-217ENST00000553309.51022No protein-
 
Processed transcript
---TSL:1
ATXN3-220ENST00000553498.5911No protein-
 
Processed transcript
---TSL:1
ATXN3-222ENST00000553686.5869No protein-
 
Processed transcript
---TSL:1
ATXN3-233ENST00000555958.5857No protein-
 
Processed transcript
---TSL:1
ATXN3-224ENST00000554214.5771No protein-
 
Processed transcript
---TSL:1
ATXN3-216ENST00000553287.5726No protein-
 
Processed transcript
---TSL:1
ATXN3-223ENST00000554040.5592No protein-
 
Processed transcript
---TSL:1
ATXN3-211ENST00000511362.5591No protein-
 
Processed transcript
---TSL:3
ATXN3-239ENST00000556339.5525No protein-
 
Processed transcript
---TSL:1
ATXN3-247ENST00000564606.6460No protein-
 
Processed transcript
---TSL:1
ATXN3-208ENST00000504047.1426No protein-
 
Processed transcript
---TSL:3
ATXN3-253ENST00000642896.1423No protein-
 
Processed transcript
----
ATXN3-255ENST00000644720.1388No protein-
 
Processed transcript
----
ATXN3-241ENST00000556644.5372No protein-
 
Processed transcript
---TSL:1
ATXN3-210ENST00000507965.5708No protein-
 
Retained intron
---TSL:2
ATXN3-248ENST00000568290.1671No protein-
 
Retained intron
---TSL:1
ATXN3-205ENST00000454964.3598No protein-
 
Retained intron
---TSL:2
Description

hes family bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:104853]

Gene Synonyms

Hry, bHLHb39

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Hes1-201ENSMUST00000023171.81468282aaENSMUSP00000023171.8
 
Protein coding
CCDS28098P35428 Q3UZZ2 GENCODE basicAPPRIS P1TSL:1
Hes1-204ENSMUST00000161839.2653No protein-
 
Processed transcript
--TSL:3
Hes1-202ENSMUST00000160592.3344No protein-
 
Processed transcript
--TSL:2
Hes1-203ENSMUST00000161676.2406No protein-
 
Retained intron
--TSL:2
Description

eukaryotic translation initiation factor 4 gamma 2 [Source:HGNC Symbol;Acc:HGNC:3297]

Gene Synonyms

DAP5, NAT1, p97

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
EIF4G2-201ENST00000339995.113794907aaENSP00000340281.6
 
Protein coding
CCDS31428D3DQV9 P78344 NM_001418.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
EIF4G2-208ENST00000526148.64001907aaENSP00000433664.2
 
Protein coding
CCDS31428D3DQV9 P78344 -GENCODE basicAPPRIS P3TSL:1
EIF4G2-205ENST00000525681.63654907aaENSP00000433371.2
 
Protein coding
CCDS31428D3DQV9 P78344 -GENCODE basicAPPRIS P3TSL:1
EIF4G2-202ENST00000396525.73346869aaENSP00000379778.3
 
Protein coding
CCDS41618H0Y3P2 -GENCODE basicAPPRIS ALT2TSL:5
EIF4G2-218ENST00000531416.61969444aaENSP00000431583.2
 
Protein coding
-H0YCH5 -APPRIS ALT2TSL:2CDS 3' incomplete
EIF4G2-203ENST00000524932.61286244aaENSP00000435523.2
 
Protein coding
-H0YEC5 -APPRIS ALT2TSL:5CDS 3' incomplete
EIF4G2-221ENST00000532082.61069282aaENSP00000433121.2
 
Protein coding
-H0YD77 -APPRIS ALT2TSL:1CDS 3' incomplete
EIF4G2-213ENST00000528839.1702234aaENSP00000434815.1
 
Protein coding
-H0YE22 -APPRIS ALT2TSL:5CDS 5' and 3' incomplete
EIF4G2-214ENST00000530211.6591116aaENSP00000433335.2
 
Protein coding
-H0YDC0 -APPRIS ALT2TSL:2CDS 3' incomplete
EIF4G2-226ENST00000532570.6573129aaENSP00000431511.2
 
Protein coding
-H0YCF8 -APPRIS ALT2TSL:5CDS 3' incomplete
EIF4G2-210ENST00000527419.657188aaENSP00000434940.2
 
Protein coding
-H0YE44 -APPRIS ALT2TSL:5CDS 3' incomplete
EIF4G2-216ENST00000530702.256384aaENSP00000435912.2
 
Protein coding
-H0YEI7 -APPRIS ALT2TSL:2CDS 3' incomplete
EIF4G2-217ENST00000531180.1557185aaENSP00000433561.1
 
Protein coding
-E9PKF8 -APPRIS ALT2TSL:4CDS 5' and 3' incomplete
EIF4G2-211ENST00000527526.6555112aaENSP00000436235.2
 
Protein coding
-H0YEN8 -APPRIS ALT2TSL:4CDS 3' incomplete
EIF4G2-212ENST00000528562.660146aaENSP00000435220.2
 
Nonsense mediated decay
-H0YE87 -APPRIS ALT2TSL:4
EIF4G2-220ENST00000531647.657984aaENSP00000433217.2
 
Nonsense mediated decay
-H0YD99 -APPRIS ALT2TSL:4
EIF4G2-231ENST00000534605.119820aaENSP00000436680.1
 
Nonsense mediated decay
-H0YEW3 -APPRIS ALT2TSL:3CDS 5' incomplete
EIF4G2-207ENST00000525995.1592No protein-
 
Processed transcript
---TSL:4
EIF4G2-229ENST00000534272.1591No protein-
 
Processed transcript
---TSL:3
EIF4G2-219ENST00000531507.5591No protein-
 
Processed transcript
---TSL:5
EIF4G2-206ENST00000525972.5584No protein-
 
Processed transcript
---TSL:2
EIF4G2-222ENST00000532120.1223No protein-
 
Processed transcript
---TSL:3
EIF4G2-225ENST00000532383.56769No protein-
 
Retained intron
---TSL:1
EIF4G2-215ENST00000530564.1849No protein-
 
Retained intron
---TSL:2
EIF4G2-227ENST00000533485.1806No protein-
 
Retained intron
---TSL:2
EIF4G2-204ENST00000525606.5690No protein-
 
Retained intron
---TSL:2
EIF4G2-223ENST00000532152.5587No protein-
 
Retained intron
---TSL:2
EIF4G2-209ENST00000527015.1582No protein-
 
Retained intron
---TSL:3
EIF4G2-224ENST00000532349.1550No protein-
 
Retained intron
---TSL:2
EIF4G2-228ENST00000534246.1523No protein-
 
Retained intron
---TSL:2
EIF4G2-230ENST00000534470.1520No protein-
 
Retained intron
---TSL:2
Description

ATPase, Ca++-sequestering [Source:MGI Symbol;Acc:MGI:1889008]

Gene Synonyms

1700121J11Rik, ATP2C1A, D930003G21Rik, PMR1, SPCA

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Atp2c1-204ENSMUST00000112558.105642918aaENSMUSP00000108177.3
 
Protein coding
CCDS40752Q80XR2 GENCODE basicAPPRIS P1TSL:1
Atp2c1-201ENSMUST00000038118.154876918aaENSMUSP00000039103.8
 
Protein coding
CCDS40752Q80XR2 GENCODE basicAPPRIS P1TSL:1
Atp2c1-202ENSMUST00000085133.134665952aaENSMUSP00000082220.7
 
Protein coding
CCDS57698Q3UZR5 GENCODE basicTSL:1
Atp2c1-205ENSMUST00000163879.92408669aaENSMUSP00000129617.3
 
Protein coding
CCDS57697Q8BMS7 GENCODE basicTSL:1
Atp2c1-212ENSMUST00000176770.82781926aaENSMUSP00000134764.2
 
Protein coding
-H3BIX7 GENCODE basicTSL:5
Atp2c1-216ENSMUST00000177074.82664887aaENSMUSP00000135646.2
 
Protein coding
-H3BL44 GENCODE basicTSL:5
Atp2c1-209ENSMUST00000176363.91082230aaENSMUSP00000135170.2
 
Protein coding
-H3BJY0 TSL:5CDS 3' incomplete
Atp2c1-210ENSMUST00000176651.8899253aaENSMUSP00000135732.2
 
Protein coding
-H3BLC2 TSL:5CDS 3' incomplete
Atp2c1-208ENSMUST00000176190.8823208aaENSMUSP00000135320.2
 
Protein coding
-H3BKB1 TSL:5CDS 3' incomplete
Atp2c1-207ENSMUST00000176036.8710177aaENSMUSP00000135010.2
 
Protein coding
-H3BJJ5 TSL:5CDS 3' incomplete
Atp2c1-219ENSMUST00000177334.2578111aaENSMUSP00000134902.2
 
Protein coding
-H3BJ99 TSL:5CDS 3' incomplete
Atp2c1-218ENSMUST00000177293.82476786aaENSMUSP00000135802.2
 
Nonsense mediated decay
-H3BLI6 TSL:5CDS 5' incomplete
Atp2c1-203ENSMUST00000112557.91514No protein-
 
Processed transcript
--TSL:1
Atp2c1-214ENSMUST00000176960.81072No protein-
 
Processed transcript
--TSL:5
Atp2c1-221ENSMUST00000190802.2833No protein-
 
Processed transcript
--TSL:5
Atp2c1-213ENSMUST00000176787.21449No protein-
 
Retained intron
--TSL:1
Atp2c1-220ENSMUST00000186495.21413No protein-
 
Retained intron
--TSL:NA
Atp2c1-217ENSMUST00000177189.8939No protein-
 
Retained intron
--TSL:1
Atp2c1-211ENSMUST00000176656.2691No protein-
 
Retained intron
--TSL:3
Atp2c1-215ENSMUST00000177000.2642No protein-
 
Retained intron
--TSL:3
Atp2c1-206ENSMUST00000175697.2255No protein-
 
Retained intron
--TSL:3
Description

testis expressed 41 [Source:HGNC Symbol;Acc:HGNC:48667]

Gene Synonyms

DKFZp686O1327, LINC00953

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
TEX41-306ENST00000653533.11308No protein-
 
lncRNA
--Ensembl Canonical
TEX41-207ENST00000445791.54635No protein-
 
lncRNA
--TSL:1
TEX41-360ENST00000665824.13337No protein-
 
lncRNA
---
TEX41-364ENST00000666826.12611No protein-
 
lncRNA
--GENCODE basic
TEX41-366ENST00000666917.12169No protein-
 
lncRNA
---
TEX41-210ENST00000451774.52098No protein-
 
lncRNA
--GENCODE basicTSL:1
TEX41-345ENST00000662233.11971No protein-
 
lncRNA
--GENCODE basic
TEX41-327ENST00000658019.11901No protein-
 
lncRNA
---
TEX41-311ENST00000654298.11869No protein-
 
lncRNA
--GENCODE basic
TEX41-383ENST00000670125.11629No protein-
 
lncRNA
--GENCODE basic
TEX41-389ENST00000671649.11612No protein-
 
lncRNA
--GENCODE basic
TEX41-348ENST00000663282.11557No protein-
 
lncRNA
--GENCODE basic
TEX41-326ENST00000657732.11515No protein-
 
lncRNA
---
TEX41-304ENST00000652981.11508No protein-
 
lncRNA
--GENCODE basic
TEX41-341ENST00000661398.11505No protein-
 
lncRNA
--GENCODE basic
TEX41-379ENST00000669646.11482No protein-
 
lncRNA
---
TEX41-373ENST00000667984.11476No protein-
 
lncRNA
---
TEX41-333ENST00000660009.11467No protein-
 
lncRNA
--GENCODE basic
TEX41-316ENST00000655187.11462No protein-
 
lncRNA
---
TEX41-334ENST00000660169.11438No protein-
 
lncRNA
--GENCODE basic
TEX41-329ENST00000658898.11433No protein-
 
lncRNA
--GENCODE basic
TEX41-357ENST00000665081.11430No protein-
 
lncRNA
--GENCODE basic
TEX41-314ENST00000654442.11425No protein-
 
lncRNA
--GENCODE basic
TEX41-343ENST00000661697.11424No protein-
 
lncRNA
---
TEX41-230ENST00000599187.61423No protein-
 
lncRNA
--TSL:5
TEX41-375ENST00000668319.11420No protein-
 
lncRNA
---
TEX41-359ENST00000665244.11415No protein-
 
lncRNA
---
TEX41-365ENST00000666890.11390No protein-
 
lncRNA
---
TEX41-309ENST00000653941.11385No protein-
 
lncRNA
---
TEX41-322ENST00000657187.11368No protein-
 
lncRNA
---
TEX41-307ENST00000653630.11360No protein-
 
lncRNA
---
TEX41-224ENST00000597655.61348No protein-
 
lncRNA
--TSL:5
TEX41-308ENST00000653910.11346No protein-
 
lncRNA
---
TEX41-206ENST00000432608.61337No protein-
 
lncRNA
--TSL:3
TEX41-323ENST00000657526.11335No protein-
 
lncRNA
--GENCODE basic
TEX41-358ENST00000665226.11331No protein-
 
lncRNA
---
TEX41-320ENST00000656881.11327No protein-
 
lncRNA
---
TEX41-353ENST00000664611.11316No protein-
 
lncRNA
---
TEX41-361ENST00000666180.11307No protein-
 
lncRNA
--GENCODE basic
TEX41-352ENST00000664258.11290No protein-
 
lncRNA
---
TEX41-331ENST00000659777.11288No protein-
 
lncRNA
---
TEX41-385ENST00000670869.11273No protein-
 
lncRNA
---
TEX41-367ENST00000666949.11260No protein-
 
lncRNA
---
TEX41-220ENST00000596747.61246No protein-
 
lncRNA
--TSL:5
TEX41-363ENST00000666675.11219No protein-
 
lncRNA
---
TEX41-374ENST00000668187.11215No protein-
 
lncRNA
---
TEX41-340ENST00000661327.11214No protein-
 
lncRNA
---
TEX41-387ENST00000671502.11198No protein-
 
lncRNA
--GENCODE basic
TEX41-362ENST00000666650.11195No protein-
 
lncRNA
---
TEX41-342ENST00000661482.11191No protein-
 
lncRNA
--GENCODE basic
TEX41-330ENST00000659773.11179No protein-
 
lncRNA
---
TEX41-354ENST00000664649.11175No protein-
 
lncRNA
---
TEX41-339ENST00000661187.11174No protein-
 
lncRNA
---
TEX41-344ENST00000661920.11168No protein-
 
lncRNA
---
TEX41-380ENST00000669793.11162No protein-
 
lncRNA
---
TEX41-266ENST00000627991.31153No protein-
 
lncRNA
--TSL:5
TEX41-291ENST00000630139.21146No protein-
 
lncRNA
--TSL:5
TEX41-268ENST00000628136.31136No protein-
 
lncRNA
--TSL:5
TEX41-222ENST00000597173.51134No protein-
 
lncRNA
--GENCODE basicTSL:1
TEX41-317ENST00000655563.11133No protein-
 
lncRNA
---
TEX41-325ENST00000657684.11124No protein-
 
lncRNA
---
TEX41-282ENST00000629218.21119No protein-
 
lncRNA
--TSL:5
TEX41-372ENST00000667905.11119No protein-
 
lncRNA
---
TEX41-338ENST00000661094.11115No protein-
 
lncRNA
---
TEX41-244ENST00000625362.31114No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-319ENST00000656353.11113No protein-
 
lncRNA
---
TEX41-378ENST00000669172.11111No protein-
 
lncRNA
---
TEX41-377ENST00000668441.11109No protein-
 
lncRNA
---
TEX41-313ENST00000654410.11104No protein-
 
lncRNA
---
TEX41-332ENST00000659810.11086No protein-
 
lncRNA
---
TEX41-301ENST00000631167.31079No protein-
 
lncRNA
--TSL:5
TEX41-376ENST00000668424.11076No protein-
 
lncRNA
--GENCODE basic
TEX41-223ENST00000597469.51073No protein-
 
lncRNA
--TSL:5
TEX41-349ENST00000663303.11069No protein-
 
lncRNA
---
TEX41-386ENST00000671290.11060No protein-
 
lncRNA
---
TEX41-370ENST00000667704.11046No protein-
 
lncRNA
---
TEX41-350ENST00000663323.11045No protein-
 
lncRNA
---
TEX41-324ENST00000657624.11045No protein-
 
lncRNA
---
TEX41-302ENST00000631271.31042No protein-
 
lncRNA
--TSL:5
TEX41-335ENST00000660660.11024No protein-
 
lncRNA
---
TEX41-286ENST00000629613.31023No protein-
 
lncRNA
--TSL:5
TEX41-321ENST00000656937.11017No protein-
 
lncRNA
---
TEX41-310ENST00000653959.11016No protein-
 
lncRNA
---
TEX41-229ENST00000599072.61012No protein-
 
lncRNA
--TSL:5
TEX41-275ENST00000628688.21008No protein-
 
lncRNA
--TSL:5
TEX41-371ENST00000667781.11000No protein-
 
lncRNA
---
TEX41-233ENST00000600679.5996No protein-
 
lncRNA
--TSL:5
TEX41-271ENST00000628213.2993No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-235ENST00000601578.5987No protein-
 
lncRNA
--TSL:5
TEX41-346ENST00000662271.1987No protein-
 
lncRNA
---
TEX41-252ENST00000626325.3982No protein-
 
lncRNA
--TSL:5
TEX41-382ENST00000670099.1975No protein-
 
lncRNA
---
TEX41-381ENST00000670002.1948No protein-
 
lncRNA
---
TEX41-315ENST00000655165.1948No protein-
 
lncRNA
--GENCODE basic
TEX41-225ENST00000597670.5944No protein-
 
lncRNA
--TSL:5
TEX41-300ENST00000631075.2938No protein-
 
lncRNA
--TSL:5
TEX41-232ENST00000600064.5928No protein-
 
lncRNA
--TSL:5
TEX41-228ENST00000598659.5927No protein-
 
lncRNA
--TSL:5
TEX41-296ENST00000630709.2926No protein-
 
lncRNA
--TSL:5
TEX41-303ENST00000650896.1914No protein-
 
lncRNA
---
TEX41-347ENST00000662863.1914No protein-
 
lncRNA
---
TEX41-250ENST00000626197.2904No protein-
 
lncRNA
--TSL:5
TEX41-237ENST00000602108.5897No protein-
 
lncRNA
--TSL:5
TEX41-388ENST00000671637.1897No protein-
 
lncRNA
---
TEX41-249ENST00000626133.2895No protein-
 
lncRNA
--TSL:5
TEX41-262ENST00000627545.2886No protein-
 
lncRNA
--TSL:5
TEX41-216ENST00000596230.5883No protein-
 
lncRNA
--TSL:5
TEX41-218ENST00000596540.5882No protein-
 
lncRNA
--TSL:5
TEX41-259ENST00000627195.2882No protein-
 
lncRNA
--TSL:5
TEX41-248ENST00000625887.2881No protein-
 
lncRNA
--TSL:5
TEX41-355ENST00000664679.1877No protein-
 
lncRNA
---
TEX41-294ENST00000630651.2874No protein-
 
lncRNA
--TSL:5
TEX41-276ENST00000628775.3874No protein-
 
lncRNA
--TSL:5
TEX41-328ENST00000658352.1866No protein-
 
lncRNA
---
TEX41-351ENST00000664055.1865No protein-
 
lncRNA
---
TEX41-356ENST00000664937.1864No protein-
 
lncRNA
---
TEX41-246ENST00000625651.2841No protein-
 
lncRNA
--TSL:5
TEX41-211ENST00000594471.5840No protein-
 
lncRNA
--TSL:5
TEX41-299ENST00000630959.2838No protein-
 
lncRNA
--TSL:5
TEX41-264ENST00000627757.2837No protein-
 
lncRNA
--TSL:5
TEX41-318ENST00000656317.1825No protein-
 
lncRNA
---
TEX41-283ENST00000629251.2813No protein-
 
lncRNA
--TSL:5
TEX41-289ENST00000630029.2806No protein-
 
lncRNA
--TSL:5
TEX41-337ENST00000660904.1803No protein-
 
lncRNA
---
TEX41-245ENST00000625557.1801No protein-
 
lncRNA
--TSL:5
TEX41-290ENST00000630122.2799No protein-
 
lncRNA
--TSL:5
TEX41-273ENST00000628422.2796No protein-
 
lncRNA
--TSL:5
TEX41-295ENST00000630691.2792No protein-
 
lncRNA
--TSL:5
TEX41-368ENST00000666980.1788No protein-
 
lncRNA
---
TEX41-369ENST00000667423.1777No protein-
 
lncRNA
---
TEX41-336ENST00000660827.1776No protein-
 
lncRNA
---
TEX41-226ENST00000597893.5770No protein-
 
lncRNA
--TSL:5
TEX41-209ENST00000451478.6766No protein-
 
lncRNA
--TSL:2
TEX41-227ENST00000598248.5765No protein-
 
lncRNA
--TSL:5
TEX41-203ENST00000420472.1765No protein-
 
lncRNA
--TSL:3
TEX41-292ENST00000630246.2762No protein-
 
lncRNA
--TSL:5
TEX41-215ENST00000596034.6751No protein-
 
lncRNA
--TSL:5
TEX41-269ENST00000628167.2743No protein-
 
lncRNA
--TSL:5
TEX41-236ENST00000602041.5742No protein-
 
lncRNA
--TSL:5
TEX41-312ENST00000654361.1721No protein-
 
lncRNA
---
TEX41-263ENST00000627675.2719No protein-
 
lncRNA
--TSL:5
TEX41-384ENST00000670681.1719No protein-
 
lncRNA
---
TEX41-238ENST00000604253.5709No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-284ENST00000629460.2707No protein-
 
lncRNA
--TSL:5
TEX41-265ENST00000627785.2704No protein-
 
lncRNA
--TSL:5
TEX41-234ENST00000601277.5700No protein-
 
lncRNA
--TSL:5
TEX41-214ENST00000595686.5693No protein-
 
lncRNA
--TSL:5
TEX41-258ENST00000627051.2691No protein-
 
lncRNA
--TSL:5
TEX41-247ENST00000625671.2690No protein-
 
lncRNA
--TSL:5
TEX41-293ENST00000630451.2690No protein-
 
lncRNA
--TSL:5
TEX41-288ENST00000629997.2689No protein-
 
lncRNA
--TSL:5
TEX41-278ENST00000628985.2688No protein-
 
lncRNA
--TSL:5
TEX41-285ENST00000629585.2680No protein-
 
lncRNA
--TSL:5
TEX41-257ENST00000626952.2679No protein-
 
lncRNA
--TSL:5
TEX41-297ENST00000630724.2677No protein-
 
lncRNA
--TSL:5
TEX41-201ENST00000414195.6674No protein-
 
lncRNA
--TSL:3
TEX41-272ENST00000628237.2672No protein-
 
lncRNA
--TSL:5
TEX41-217ENST00000596278.5669No protein-
 
lncRNA
--TSL:5
TEX41-281ENST00000629194.2661No protein-
 
lncRNA
--TSL:5
TEX41-277ENST00000628794.2654No protein-
 
lncRNA
--TSL:5
TEX41-221ENST00000596970.5646No protein-
 
lncRNA
--TSL:5
TEX41-267ENST00000628057.2645No protein-
 
lncRNA
--TSL:5
TEX41-251ENST00000626239.2640No protein-
 
lncRNA
--TSL:5
TEX41-219ENST00000596589.5636No protein-
 
lncRNA
--TSL:5
TEX41-260ENST00000627419.2631No protein-
 
lncRNA
--TSL:5
TEX41-212ENST00000594626.5627No protein-
 
lncRNA
--TSL:5
TEX41-287ENST00000629631.2613No protein-
 
lncRNA
--TSL:5
TEX41-305ENST00000653186.1613No protein-
 
lncRNA
---
TEX41-255ENST00000626404.1610No protein-
 
lncRNA
--TSL:5
TEX41-279ENST00000629149.1609No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-202ENST00000414256.5604No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-213ENST00000594837.3602No protein-
 
lncRNA
--TSL:5
TEX41-241ENST00000608652.5594No protein-
 
lncRNA
--TSL:5
TEX41-240ENST00000608432.5594No protein-
 
lncRNA
--TSL:5
TEX41-280ENST00000629185.2591No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-261ENST00000627497.2558No protein-
 
lncRNA
--TSL:5
TEX41-242ENST00000609705.5552No protein-
 
lncRNA
--TSL:5
TEX41-208ENST00000451027.5546No protein-
 
lncRNA
--TSL:4
TEX41-239ENST00000605238.3543No protein-
 
lncRNA
--TSL:5
TEX41-205ENST00000431734.5529No protein-
 
lncRNA
--TSL:4
TEX41-270ENST00000628180.2515No protein-
 
lncRNA
--TSL:5
TEX41-204ENST00000423031.1491No protein-
 
lncRNA
--GENCODE basicTSL:4
TEX41-274ENST00000628611.2423No protein-
 
lncRNA
--TSL:5
TEX41-254ENST00000626394.2423No protein-
 
lncRNA
--GENCODE basicTSL:5
TEX41-298ENST00000630732.2380No protein-
 
lncRNA
--TSL:5
TEX41-256ENST00000626411.2368No protein-
 
lncRNA
--TSL:5
TEX41-231ENST00000599358.5366No protein-
 
lncRNA
--TSL:5
TEX41-243ENST00000614173.1190No protein-
 
lncRNA
--TSL:5
TEX41-253ENST00000626363.2144No protein-
 
lncRNA
--TSL:5
Description

ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
UBC-201ENST00000339647.62193685aaENSP00000344818.5
 
Protein coding
CCDS9260P0CG48 NM_021009.7MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
UBC-205ENST00000536769.13745685aaENSP00000441543.1
 
Protein coding
CCDS9260P0CG48 -GENCODE basicAPPRIS P1TSL:NA
UBC-206ENST00000538617.51303305aaENSP00000443053.1
 
Protein coding
-Q96C32 -GENCODE basicTSL:5
UBC-213ENST00000546120.2718229aaENSP00000438394.2
 
Protein coding
-Q5PY61 -GENCODE basicTSL:5
UBC-208ENST00000540700.1627134aaENSP00000441238.1
 
Protein coding
-F5GYU3 -TSL:2CDS 3' incomplete
UBC-207ENST00000540351.1622160aaENSP00000442800.1
 
Protein coding
-F5H747 -TSL:1CDS 3' incomplete
UBC-209ENST00000541272.1582169aaENSP00000440205.1
 
Protein coding
-F5GXK7 -TSL:5CDS 3' incomplete
UBC-203ENST00000535859.1582122aaENSP00000437452.1
 
Protein coding
-F5H6Q2 -TSL:2CDS 3' incomplete
UBC-202ENST00000535131.1563149aaENSP00000439492.1
 
Protein coding
-F5H265 -TSL:5CDS 3' incomplete
UBC-214ENST00000546271.1559136aaENSP00000438289.1
 
Protein coding
-F5H2Z3 -TSL:4CDS 3' incomplete
UBC-210ENST00000541645.1548155aaENSP00000445337.1
 
Protein coding
-F5H388 -TSL:2CDS 3' incomplete
UBC-211ENST00000542416.151761aaENSP00000441556.1
 
Protein coding
-F5GZ39 -TSL:4CDS 3' incomplete
UBC-204ENST00000536661.1624No protein-
 
Processed transcript
---TSL:2
UBC-212ENST00000544481.1477No protein-
 
Processed transcript
---TSL:4
Description

BRCA1 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1100]

Gene Synonyms

BRCC1, FANCS, PPP1R53, RNF53

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
BRCA1-203ENST00000357654.970881863aaENSP00000350283.3
 
Protein coding
CCDS11453P38398-1 NM_007294.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
BRCA1-210ENST00000471181.772701884aaENSP00000418960.2
 
Protein coding
CCDS11456P38398-7 -GENCODE basicAPPRIS ALT2TSL:1
BRCA1-221ENST00000493795.557321816aaENSP00000418775.1
 
Protein coding
CCDS11459P38398-8 -GENCODE basicTSL:5
BRCA1-208ENST00000468300.53273699aaENSP00000417148.1
 
Protein coding
CCDS11455P38398-6 -GENCODE basicTSL:1
BRCA1-219ENST00000491747.62379759aaENSP00000420705.2
 
Protein coding
CCDS11454P38398-3 -GENCODE basicTSL:5
BRCA1-202ENST00000354071.744971399aaENSP00000326002.7
 
Protein coding
-Q5YLB2 -GENCODE basicTSL:1
BRCA1-201ENST00000352993.73668721aaENSP00000312236.5
 
Protein coding
-P38398-5 -GENCODE basicTSL:5
BRCA1-232ENST00000644379.12571659aaENSP00000496570.1
 
Protein coding
-A0A2R8Y7V5 -CDS 5' incomplete
BRCA1-230ENST00000634433.12534798aaENSP00000489431.1
 
Protein coding
-A0A0U1RRA9 -TSL:5CDS 3' incomplete
BRCA1-234ENST00000652672.12291601aaENSP00000498906.1
 
Protein coding
-A0A494C182 -CDS 3' incomplete
BRCA1-209ENST00000470026.52108649aaENSP00000419274.1
 
Protein coding
-E7EWN5 -TSL:1CDS 3' incomplete
BRCA1-214ENST00000477152.51980622aaENSP00000419988.1
 
Protein coding
-E9PH68 -TSL:1CDS 3' incomplete
BRCA1-215ENST00000478531.51972623aaENSP00000420412.1
 
Protein coding
-E7EUM2 -TSL:1CDS 3' incomplete
BRCA1-222ENST00000493919.51948572aaENSP00000418819.1
 
Protein coding
-B7ZA85 -TSL:2CDS 3' incomplete
BRCA1-223ENST00000494123.51612473aaENSP00000419103.1
 
Protein coding
-Q3B891 -TSL:1CDS 3' incomplete
BRCA1-216ENST00000484087.51495498aaENSP00000419481.1
 
Protein coding
-H0Y8B8 -TSL:5CDS 5' and 3' incomplete
BRCA1-226ENST00000591534.51282354aaENSP00000467329.1
 
Protein coding
-K7EPC7 -GENCODE basicTSL:1
BRCA1-212ENST00000473961.5958319aaENSP00000420201.1
 
Protein coding
-H0Y8D8 -TSL:2CDS 5' and 3' incomplete
BRCA1-217ENST00000487825.5800266aaENSP00000418212.1
 
Protein coding
-H0Y881 -TSL:5CDS 5' and 3' incomplete
BRCA1-225ENST00000586385.5781173aaENSP00000465818.1
 
Protein coding
-C6YB45 -GENCODE basicTSL:1
BRCA1-224ENST00000497488.1779177aaENSP00000418986.1
 
Protein coding
-C9IZW4 -TSL:1CDS 3' incomplete
BRCA1-213ENST00000476777.5769222aaENSP00000417554.1
 
Protein coding
-E7EQW4 -TSL:5CDS 3' incomplete
BRCA1-206ENST00000461574.1726242aaENSP00000417241.1
 
Protein coding
-H0Y850 -TSL:2CDS 5' and 3' incomplete
BRCA1-228ENST00000618469.171823aaENSP00000478114.1
 
Protein coding
-G1UI37 -TSL:1CDS 3' incomplete
BRCA1-227ENST00000591849.556396aaENSP00000465347.1
 
Protein coding
-K7EJW3 -GENCODE basicTSL:1
BRCA1-233ENST00000644555.155865aaENSP00000494614.1
 
Protein coding
-A0A2R8Y587 -CDS 3' incomplete
BRCA1-218ENST00000489037.145598aaENSP00000420781.1
 
Protein coding
-E7ENB7 -TSL:4CDS 3' incomplete
BRCA1-204ENST00000412061.31312437aaENSP00000397145.3
 
Non stop decay
-A0A0A0MSN1 -TSL:1CDS 5' incomplete
BRCA1-205ENST00000461221.5569363aaENSP00000418548.1
 
Nonsense mediated decay
-P38398-2 -TSL:1
BRCA1-220ENST00000492859.5158459aaENSP00000420253.1
 
Nonsense mediated decay
-E9PC22 -TSL:1
BRCA1-231ENST00000642945.1125581aaENSP00000495897.1
 
Nonsense mediated decay
-A0A2R8Y6Y9 --
BRCA1-207ENST00000461798.558263aaENSP00000417988.1
 
Nonsense mediated decay
-P38398-2 -TSL:3
BRCA1-229ENST00000621897.1375No protein-
 
Processed transcript
---TSL:5
BRCA1-211ENST00000472490.1561No protein-
 
Retained intron
---TSL:3
Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:10866]

Gene Synonyms

MRT12, SIAT6

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ST3GAL3-205ENST00000347631.82254375aaENSP00000317192.6
 
Protein coding
CCDS492Q11203-1 NM_006279.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:5
ST3GAL3-241ENST00000642331.12487449aaENSP00000493823.1
 
Protein coding
CCDS85965A0A2R8YDJ6 -GENCODE basic
ST3GAL3-246ENST00000643252.12422434aaENSP00000495333.1
 
Protein coding
CCDS85962A0A2R8Y6H4 -GENCODE basic
ST3GAL3-201ENST00000262915.82412444aaENSP00000262915.3
 
Protein coding
CCDS493Q11203-4 -GENCODE basicTSL:5
ST3GAL3-206ENST00000351035.82388429aaENSP00000316999.6
 
Protein coding
CCDS496Q11203-13 -GENCODE basicTSL:5
ST3GAL3-278ENST00000646971.12343375aaENSP00000495887.1
 
Protein coding
CCDS492Q11203-1 -GENCODE basicAPPRIS P4
ST3GAL3-253ENST00000644195.12312375aaENSP00000494201.1
 
Protein coding
CCDS492Q11203-1 -GENCODE basicAPPRIS P4
ST3GAL3-208ENST00000361392.92297390aaENSP00000355341.5
 
Protein coding
CCDS494Q11203-2 -GENCODE basicTSL:1
ST3GAL3-209ENST00000361400.92212359aaENSP00000354748.4
 
Protein coding
CCDS497Q11203-15 -GENCODE basicAPPRIS ALT1TSL:1
ST3GAL3-219ENST00000372374.72124344aaENSP00000361449.2
 
Protein coding
CCDS57989Q11203-7 -GENCODE basicTSL:5
ST3GAL3-218ENST00000372372.72109413aaENSP00000361447.2
 
Protein coding
CCDS498Q11203-19 -GENCODE basicTSL:1
ST3GAL3-282ENST00000647237.12103331aaENSP00000495624.1
 
Protein coding
CCDS85961A0A2R8Y6L4 -GENCODE basic
ST3GAL3-207ENST00000353126.81942277aaENSP00000330463.3
 
Protein coding
CCDS495Q11203-8 -GENCODE basicTSL:5
ST3GAL3-244ENST00000642934.11885261aaENSP00000494146.1
 
Protein coding
CCDS57990Q11203-16 -GENCODE basic
ST3GAL3-204ENST00000335430.101805185aaENSP00000335633.7
 
Protein coding
CCDS57994Q11203-23 -GENCODE basicTSL:5
ST3GAL3-239ENST00000545417.51667170aaENSP00000439634.1
 
Protein coding
CCDS499Q11203-3 -GENCODE basicTSL:5
ST3GAL3-202ENST00000330208.61479101aaENSP00000333494.3
 
Protein coding
CCDS57992Q11203-22 -GENCODE basicTSL:5
ST3GAL3-214ENST00000372366.61421185aaENSP00000361441.1
 
Protein coding
CCDS57994Q11203-23 -GENCODE basicTSL:1
ST3GAL3-217ENST00000372369.51038345aaENSP00000361444.1
 
Protein coding
CCDS57988Q11203-5 -GENCODE basicTSL:1
ST3GAL3-211ENST00000361812.91020170aaENSP00000355201.4
 
Protein coding
CCDS499Q11203-3 -GENCODE basicTSL:1
ST3GAL3-234ENST00000531993.6693230aaENSP00000432682.2
 
Protein coding
CCDS85964Q11203-21 -GENCODE basicTSL:1
ST3GAL3-215ENST00000372367.5644201aaENSP00000361442.1
 
Protein coding
CCDS57993Q11203-24 -GENCODE basicTSL:1
ST3GAL3-229ENST00000528371.5599186aaENSP00000434876.1
 
Protein coding
CCDS57991Q11203-17 -GENCODE basicTSL:1
ST3GAL3-212ENST00000372362.6468155aaENSP00000361437.2
 
Protein coding
CCDS500Q11203-12 -GENCODE basicTSL:1
ST3GAL3-232ENST00000531451.5420139aaENSP00000435603.1
 
Protein coding
CCDS53310Q11203-18 -GENCODE basicTSL:1
ST3GAL3-233ENST00000531816.1344101aaENSP00000434378.1
 
Protein coding
CCDS57992Q11203-22 -GENCODE basicTSL:1
ST3GAL3-262ENST00000645161.13282172aaENSP00000495013.1
 
Protein coding
-A0A2R8Y682 -CDS 5' incomplete
ST3GAL3-281ENST00000647148.12354411aaENSP00000495939.1
 
Protein coding
-A0A2R8Y7D8 -GENCODE basic
ST3GAL3-259ENST00000645034.12256453aaENSP00000496350.1
 
Protein coding
-A0A2R8Y7Z2 -GENCODE basic
ST3GAL3-210ENST00000361746.92229406aaENSP00000354657.5
 
Protein coding
-A0A2U3TZK9 -GENCODE basicTSL:1
ST3GAL3-276ENST00000646686.12221418aaENSP00000495683.1
 
Protein coding
-A0A2R8Y732 -GENCODE basic
ST3GAL3-216ENST00000372368.72074380aaENSP00000361443.3
 
Protein coding
-A0A2U3TZM2 -GENCODE basicTSL:1
ST3GAL3-254ENST00000644287.11905344aaENSP00000496054.1
 
Protein coding
-A0A2R8Y7J2 -CDS 5' incomplete
ST3GAL3-237ENST00000533933.61844307aaENSP00000432965.2
 
Protein coding
-A0A2U3U052 -TSL:1CDS 5' incomplete
ST3GAL3-257ENST00000644922.11719266aaENSP00000496289.1
 
Protein coding
-A0A2R8YFA0 -CDS 5' incomplete
ST3GAL3-203ENST00000332628.111681304aaENSP00000329755.7
 
Protein coding
-A0A2U3TZH9 -TSL:1CDS 5' incomplete
ST3GAL3-285ENST00000647503.11435163aaENSP00000494118.1
 
Protein coding
-A0A2R8Y4W6 -CDS 5' incomplete
ST3GAL3-260ENST00000645117.11148165aaENSP00000495252.1
 
Protein coding
-A0A2R8YE42 -CDS 5' incomplete
ST3GAL3-224ENST00000484868.21053102aaENSP00000496035.1
 
Protein coding
-A0A2R8Y7D5 -GENCODE basicTSL:3
ST3GAL3-251ENST00000643989.173390aaENSP00000496568.1
 
Protein coding
-A0A2R8YH87 -CDS 5' incomplete
ST3GAL3-213ENST00000372365.5673186aaENSP00000361440.1
 
Protein coding
-Q11203-10 -GENCODE basicTSL:1
ST3GAL3-226ENST00000490502.1592197aaENSP00000436298.1
 
Protein coding
-H0YEP7 -TSL:3CDS 5' and 3' incomplete
ST3GAL3-273ENST00000646109.152475aaENSP00000493476.1
 
Protein coding
-A0A2R8Y244 -CDS 3' incomplete
ST3GAL3-265ENST00000645640.12602121aaENSP00000494852.1
 
Nonsense mediated decay
-Q11203-11 --
ST3GAL3-261ENST00000645142.12458189aaENSP00000496550.1
 
Nonsense mediated decay
-Q11203-6 --
ST3GAL3-245ENST00000642949.12278189aaENSP00000495709.1
 
Nonsense mediated decay
-Q11203-6 --
ST3GAL3-268ENST00000645705.12266130aaENSP00000496492.1
 
Nonsense mediated decay
-A0A2R8YFI8 --
ST3GAL3-263ENST00000645165.12261121aaENSP00000493660.1
 
Nonsense mediated decay
-Q11203-11 --
ST3GAL3-247ENST00000643283.12242204aaENSP00000494746.1
 
Nonsense mediated decay
-A0A2R8YF05 --
ST3GAL3-280ENST00000647134.1221799aaENSP00000495797.1
 
Nonsense mediated decay
-A0A2R8Y6U8 --
ST3GAL3-284ENST00000647482.12210142aaENSP00000495567.1
 
Nonsense mediated decay
-A0A2R8Y6U3 --
ST3GAL3-269ENST00000646027.12179298aaENSP00000494396.1
 
Nonsense mediated decay
-A0A2R8YDB0 --
ST3GAL3-271ENST00000646069.12106276aaENSP00000496585.1
 
Nonsense mediated decay
-A0A2R8YFM5 --
ST3GAL3-242ENST00000642504.12098115aaENSP00000494857.1
 
Nonsense mediated decay
-Q11203-9 --
ST3GAL3-249ENST00000643813.1209855aaENSP00000496646.1
 
Nonsense mediated decay
-A0A2R8Y847 -CDS 5' incomplete
ST3GAL3-248ENST00000643597.12007202aaENSP00000495977.1
 
Nonsense mediated decay
-A0A2R8Y7B2 --
ST3GAL3-264ENST00000645394.12007158aaENSP00000495299.1
 
Nonsense mediated decay
-A0A2R8Y6K5 --
ST3GAL3-240ENST00000642194.11762166aaENSP00000493708.1
 
Nonsense mediated decay
-A0A2R8YDA9 --
ST3GAL3-243ENST00000642780.11684119aaENSP00000494013.1
 
Nonsense mediated decay
-A0A2R8YCV7 -CDS 5' incomplete
ST3GAL3-230ENST00000530154.51670106aaENSP00000434686.1
 
Nonsense mediated decay
-E9PNN5 -TSL:2
ST3GAL3-256ENST00000644645.11538106aaENSP00000495647.1
 
Nonsense mediated decay
-A0A2R8Y717 -CDS 5' incomplete
ST3GAL3-222ENST00000469715.6127773aaENSP00000431700.2
 
Nonsense mediated decay
-Q11203-26 -TSL:1
ST3GAL3-238ENST00000533997.61191115aaENSP00000432071.1
 
Nonsense mediated decay
-Q11203-9 -TSL:1
ST3GAL3-227ENST00000490541.6103743aaENSP00000435018.2
 
Nonsense mediated decay
-Q11203-25 -TSL:1
ST3GAL3-225ENST00000489897.61000121aaENSP00000437206.1
 
Nonsense mediated decay
-Q11203-11 -TSL:5
ST3GAL3-272ENST00000646096.198185aaENSP00000496444.1
 
Nonsense mediated decay
-E9PJI3 --
ST3GAL3-231ENST00000530581.5893228aaENSP00000437293.1
 
Nonsense mediated decay
-Q11203-20 -TSL:1
ST3GAL3-223ENST00000479383.688385aaENSP00000432214.1
 
Nonsense mediated decay
-E9PJI3 -TSL:3
ST3GAL3-236ENST00000533212.5781151aaENSP00000435621.1
 
Nonsense mediated decay
-Q11203-14 -TSL:1
ST3GAL3-279ENST00000647128.1708105aaENSP00000494374.1
 
Nonsense mediated decay
-A0A2R8Y4Y4 --
ST3GAL3-235ENST00000532911.670385aaENSP00000431816.1
 
Nonsense mediated decay
-E9PJI3 -TSL:5
ST3GAL3-220ENST00000461066.6692100aaENSP00000433668.1
 
Nonsense mediated decay
-E9PJX2 -TSL:5
ST3GAL3-270ENST00000646032.156621aaENSP00000496117.1
 
Nonsense mediated decay
-A0A2R8Y7H6 -CDS 5' incomplete
ST3GAL3-250ENST00000643886.155954aaENSP00000495313.1
 
Nonsense mediated decay
-A0A2R8YFP6 --
ST3GAL3-221ENST00000461375.2853No protein-
 
Processed transcript
---TSL:5
ST3GAL3-275ENST00000646416.14776No protein-
 
Retained intron
----
ST3GAL3-283ENST00000647299.13416No protein-
 
Retained intron
----
ST3GAL3-277ENST00000646776.13218No protein-
 
Retained intron
----
ST3GAL3-267ENST00000645670.12718No protein-
 
Retained intron
----
ST3GAL3-228ENST00000495482.22593No protein-
 
Retained intron
---TSL:2
ST3GAL3-252ENST00000644016.12008No protein-
 
Retained intron
----
ST3GAL3-266ENST00000645644.11707No protein-
 
Retained intron
----
ST3GAL3-255ENST00000644378.11222No protein-
 
Retained intron
----
ST3GAL3-258ENST00000645012.1837No protein-
 
Retained intron
----
ST3GAL3-274ENST00000646113.1492No protein-
 
Retained intron
----
Description

CCCTC-binding factor like [Source:HGNC Symbol;Acc:HGNC:16234]

Gene Synonyms

BORIS, CT27, dJ579F20.2

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
CTCFL-201ENST00000243914.83500663aaENSP00000243914.3
 
Protein coding
CCDS13459Q8NI51-1 NM_001386993.1MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
CTCFL-216ENST00000608263.54040663aaENSP00000476783.1
 
Protein coding
CCDS13459Q8NI51-1 -GENCODE basicAPPRIS P2TSL:1
CTCFL-207ENST00000429804.73864613aaENSP00000415329.2
 
Protein coding
CCDS58779Q8NI51-8 -GENCODE basicTSL:1
CTCFL-222ENST00000609232.53668663aaENSP00000476398.1
 
Protein coding
CCDS13459Q8NI51-1 -GENCODE basicAPPRIS P2TSL:1
CTCFL-202ENST00000371196.63491663aaENSP00000360239.2
 
Protein coding
CCDS13459Q8NI51-1 -GENCODE basicAPPRIS P2TSL:1
CTCFL-204ENST00000422869.62966573aaENSP00000399061.2
 
Protein coding
CCDS58782Q8NI51-2 -GENCODE basicTSL:1
CTCFL-208ENST00000432255.62955483aaENSP00000409344.2
 
Protein coding
CCDS58778Q8NI51-4 -GENCODE basicTSL:1
CTCFL-217ENST00000608425.52915627aaENSP00000476458.1
 
Protein coding
CCDS68164V9GY73 -GENCODE basicTSL:1
CTCFL-218ENST00000608440.52749665aaENSP00000477488.1
 
Protein coding
CCDS58781Q8NI51-3 -GENCODE basicAPPRIS ALT2TSL:1
CTCFL-205ENST00000423479.72478700aaENSP00000415579.2
 
Protein coding
CCDS58780Q8NI51-7 -GENCODE basicAPPRIS ALT2TSL:1
CTCFL-212ENST00000539382.52262422aaENSP00000439998.1
 
Protein coding
CCDS58777Q8NI51-5 -GENCODE basicTSL:1
CTCFL-209ENST00000433949.72234460aaENSP00000392034.3
 
Protein coding
CCDS68162Q8NI51-10 -GENCODE basicAPPRIS ALT2TSL:1
CTCFL-221ENST00000608903.52135299aaENSP00000476718.1
 
Protein coding
CCDS68161Q8NI51-11 -GENCODE basicTSL:1
CTCFL-211ENST00000502686.62023403aaENSP00000437999.1
 
Protein coding
CCDS58776Q8NI51-6 -GENCODE basicTSL:1
CTCFL-215ENST00000608158.51984404aaENSP00000477165.1
 
Protein coding
CCDS68163V9GYX4 -GENCODE basicTSL:1
CTCFL-210ENST00000481655.21512404aaENSP00000476577.1
 
Protein coding
CCDS68163V9GYX4 -GENCODE basicTSL:1
CTCFL-206ENST00000426658.63996451aaENSP00000403369.2
 
Nonsense mediated decay
-F5H2V8 -TSL:1
CTCFL-203ENST00000422109.62964427aaENSP00000413713.2
 
Nonsense mediated decay
-Q8NI51-9 -TSL:1
CTCFL-219ENST00000608720.52241426aaENSP00000477412.1
 
Nonsense mediated decay
-V9GZ46 -TSL:1
CTCFL-220ENST00000608858.5905No protein-
 
Processed transcript
---TSL:1
CTCFL-213ENST00000607923.52964No protein-
 
Retained intron
---TSL:1
CTCFL-214ENST00000608108.11628No protein-
 
Retained intron
---TSL:1
Statistics

Exons: 12, Coding exons: 10, Transcript length: 3,668 bps, Translation length: 663 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13459

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NI51

Transcript Support Level (TSL)

TSL:1

Version

ENST00000609232.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x305c4440)