Ensembl mobile site help

Things to know when navigating the Ensembl mobile site

Search box

Use the search box at the top right of all Ensembl views to search for a gene, phenotype, sequence variant, and more.

Top navigation

Touch MENU button to open the main menu and touch again to close.

Touch MENU

Left hand side menu

Touch the left menu icon () or swipe right to open the side menu and touch anywhere outside the menu or touch the cross icon or swipe left to close.

The ? icon

Touch the icon to get help

And don't forget to send us your comments using the feedback link inside the main menu.

EnsemblEnsembl Home
Description

rhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]

Gene Synonyms

LINC00054, NCRMS, NCRNA00054

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000663411.1RMST-2222264No protein-
 
Retained intron
---
ENST00000547996.2RMST-2041621No protein-
 
Retained intron
--TSL:3
ENST00000547946.1RMST-203687No protein-
 
Retained intron
--TSL:NA
ENST00000640149.1RMST-2092844No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:5
ENST00000658877.1RMST-2163444No protein-
 
lncRNA
--GENCODE basic
ENST00000639542.1RMST-2083269No protein-
 
lncRNA
--TSL:5
ENST00000690227.1RMST-2372945No protein-
 
lncRNA
--GENCODE basic
ENST00000687565.1RMST-2342690No protein-
 
lncRNA
---
ENST00000660138.1RMST-2172632No protein-
 
lncRNA
---
ENST00000538559.6RMST-2012598No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000687746.1RMST-2352480No protein-
 
lncRNA
---
ENST00000665975.1RMST-2272299No protein-
 
lncRNA
--GENCODE basic
ENST00000670745.1RMST-2332278No protein-
 
lncRNA
---
ENST00000693044.1RMST-2392231No protein-
 
lncRNA
---
ENST00000689144.1RMST-2362218No protein-
 
lncRNA
---
ENST00000657936.1RMST-2152210No protein-
 
lncRNA
---
ENST00000662772.1RMST-2212122No protein-
 
lncRNA
---
ENST00000639121.1RMST-2072099No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000541282.5RMST-2022099No protein-
 
lncRNA
--TSL:2
ENST00000662330.1RMST-2192069No protein-
 
lncRNA
---
ENST00000656448.1RMST-2132061No protein-
 
lncRNA
---
ENST00000666664.1RMST-2282049No protein-
 
lncRNA
---
ENST00000666798.1RMST-2291980No protein-
 
lncRNA
--GENCODE basic
ENST00000664685.1RMST-2261902No protein-
 
lncRNA
--GENCODE basic
ENST00000667306.1RMST-2301902No protein-
 
lncRNA
--GENCODE basic
ENST00000654331.1RMST-2111794No protein-
 
lncRNA
---
ENST00000663509.1RMST-2231736No protein-
 
lncRNA
---
ENST00000664656.1RMST-2251730No protein-
 
lncRNA
---
ENST00000661686.1RMST-2181666No protein-
 
lncRNA
---
ENST00000662502.1RMST-2201587No protein-
 
lncRNA
---
ENST00000690936.1RMST-2381548No protein-
 
lncRNA
---
ENST00000670160.1RMST-2321474No protein-
 
lncRNA
---
ENST00000552411.2RMST-2061306No protein-
 
lncRNA
--TSL:3
ENST00000548886.2RMST-2051125No protein-
 
lncRNA
--TSL:1
ENST00000656458.1RMST-2141122No protein-
 
lncRNA
---
ENST00000652810.1RMST-2101064No protein-
 
lncRNA
---
ENST00000667445.1RMST-231971No protein-
 
lncRNA
---
ENST00000655366.1RMST-212859No protein-
 
lncRNA
---
ENST00000663659.1RMST-224793No protein-
 
lncRNA
---
Description

DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]

Gene Synonyms

DBX, DDX14, DDX3, HLP2

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000644876.2DDX3X-2444635662aaENSP00000494040.1
 
Protein coding
CCDS43931O00571-1 NM_001356.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3
ENST00000629496.3DDX3X-2175036662aaENSP00000487224.1
 
Protein coding
CCDS43931O00571-1 -GENCODE basicAPPRIS P3TSL:5
ENST00000457138.7DDX3X-2034786646aaENSP00000392494.2
 
Protein coding
CCDS55404O00571-2 -GENCODE basicTSL:2
ENST00000646679.1DDX3X-2634693475aaENSP00000494887.1
 
Protein coding
CCDS87736A0A2R8YDT5 -GENCODE basic
ENST00000646319.1DDX3X-2604554661aaENSP00000495377.1
 
Protein coding
CCDS87734A0A2R8YFS5 -GENCODE basicAPPRIS ALT1
ENST00000642424.1DDX3X-2255789476aaENSP00000496356.1
 
Protein coding
-A0A2R8Y7T2 -GENCODE basic
ENST00000399959.7DDX3X-2014632661aaENSP00000382840.3
 
Protein coding
-A0A2U3TZJ9 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000644074.1DDX3X-2384620660aaENSP00000496663.1
 
Protein coding
-A0A2R8YFR4 -GENCODE basicAPPRIS ALT1
ENST00000644677.1DDX3X-2434457622aaENSP00000496524.1
 
Protein coding
-A0A2R8Y5G6 -GENCODE basic
ENST00000646122.1DDX3X-2574435641aaENSP00000496222.1
 
Protein coding
-A0A2R8YF78 -GENCODE basic
ENST00000644109.1DDX3X-2394409716aaENSP00000494952.1
 
Protein coding
-A0A2R8Y645 -GENCODE basic
ENST00000644073.1DDX3X-2374349647aaENSP00000493475.1
 
Protein coding
-A0A2R8YCW1 -GENCODE basic
ENST00000642322.1DDX3X-2244273476aaENSP00000496052.1
 
Protein coding
-A0A2R8Y7T2 -GENCODE basic
ENST00000644513.1DDX3X-2424245662aaENSP00000493819.1
 
Protein coding
-A0A2R8Y4A4 -GENCODE basicAPPRIS ALT1
ENST00000646107.1DDX3X-2564231622aaENSP00000494518.1
 
Protein coding
-A0A2R8Y5G6 -GENCODE basic
ENST00000441189.4DDX3X-2024122629aaENSP00000414281.3
 
Protein coding
-F6S8Q4 -GENCODE basicTSL:2
ENST00000625837.2DDX3X-2153237733aaENSP00000486306.1
 
Protein coding
-A0A0D9SF53 -GENCODE basicTSL:5
ENST00000626301.2DDX3X-2163013640aaENSP00000486443.1
 
Protein coding
-A0A0D9SFB3 -GENCODE basicTSL:5
ENST00000646627.1DDX3X-2622469476aaENSP00000493795.1
 
Protein coding
-A0A2R8Y7T2 -GENCODE basic
ENST00000643821.1DDX3X-235143440aaENSP00000493997.1
 
Protein coding
-A0A2R8YF31 -GENCODE basic
ENST00000616050.3DDX3X-212844222aaENSP00000487626.2
 
Protein coding
-A0A0J9YVQ7 -TSL:5CDS 5' incomplete
ENST00000611968.2DDX3X-209782189aaENSP00000479790.2
 
Protein coding
-A0A087WVZ1 -TSL:3CDS 5' incomplete
ENST00000615313.5DDX3X-21057096aaENSP00000496257.1
 
Protein coding
-A0A2R8YF89 -TSL:4CDS 3' incomplete
ENST00000629785.2DDX3X-2183457662aaENSP00000486516.1
 
Nonsense mediated decay
CCDS43931O00571-1 -TSL:5
ENST00000478993.5DDX3X-2043397662aaENSP00000478443.1
 
Nonsense mediated decay
CCDS43931O00571-1 -TSL:1
ENST00000630255.2DDX3X-2193289662aaENSP00000486720.1
 
Nonsense mediated decay
CCDS43931O00571-1 -TSL:5
ENST00000646223.1DDX3X-259620361aaENSP00000496043.1
 
Nonsense mediated decay
-A0A2R8Y770 --
ENST00000645080.1DDX3X-246559440aaENSP00000494767.1
 
Nonsense mediated decay
-A0A2R8YF31 --
ENST00000642793.1DDX3X-2324596181aaENSP00000493976.1
 
Nonsense mediated decay
-A0A2R8YCU0 --
ENST00000643963.1DDX3X-2364467193aaENSP00000495264.1
 
Nonsense mediated decay
-A0A2R8Y650 --
ENST00000645589.1DDX3X-2534239503aaENSP00000494588.1
 
Nonsense mediated decay
-A0A2R8YDH3 --
ENST00000630858.2DDX3X-2213181647aaENSP00000486514.1
 
Nonsense mediated decay
-A0A0D9SG12 -TSL:5
ENST00000630370.2DDX3X-2203120647aaENSP00000487062.1
 
Nonsense mediated decay
-A0A0D9SG12 -TSL:5
ENST00000542215.5DDX3X-206159278aaENSP00000493687.1
 
Nonsense mediated decay
-A0A2R8Y4D2 -TSL:2
ENST00000645783.1DDX3X-254144140aaENSP00000494905.1
 
Nonsense mediated decay
-A0A2R8YF31 --
ENST00000615742.4DDX3X-21148598aaENSP00000480647.1
 
Nonsense mediated decay
-A0A087WX09 -TSL:4
ENST00000647373.1DDX3X-26832948aaENSP00000496076.1
 
Nonsense mediated decay
-A0A2R8YGJ1 -CDS 5' incomplete
ENST00000622198.5DDX3X-213608No protein-
 
Processed transcript
---TSL:4
ENST00000611546.2DDX3X-208570No protein-
 
Processed transcript
---TSL:5
ENST00000610559.5DDX3X-207553No protein-
 
Processed transcript
---TSL:4
ENST00000642589.1DDX3X-2267473No protein-
 
Retained intron
----
ENST00000645574.1DDX3X-2527284No protein-
 
Retained intron
----
ENST00000642161.1DDX3X-2236724No protein-
 
Retained intron
----
ENST00000644958.1DDX3X-2455817No protein-
 
Retained intron
----
ENST00000645120.1DDX3X-2475651No protein-
 
Retained intron
----
ENST00000645380.1DDX3X-2505617No protein-
 
Retained intron
----
ENST00000646196.1DDX3X-2585493No protein-
 
Retained intron
----
ENST00000645561.1DDX3X-2515340No protein-
 
Retained intron
----
ENST00000646390.1DDX3X-2615141No protein-
 
Retained intron
----
ENST00000646822.1DDX3X-2645071No protein-
 
Retained intron
----
ENST00000642722.1DDX3X-2304989No protein-
 
Retained intron
----
ENST00000645338.1DDX3X-2494698No protein-
 
Retained intron
----
ENST00000646940.1DDX3X-2654649No protein-
 
Retained intron
----
ENST00000644307.1DDX3X-2414605No protein-
 
Retained intron
----
ENST00000642687.1DDX3X-2294508No protein-
 
Retained intron
----
ENST00000642597.1DDX3X-2274327No protein-
 
Retained intron
----
ENST00000647286.1DDX3X-2674257No protein-
 
Retained intron
----
ENST00000642801.1DDX3X-2334116No protein-
 
Retained intron
----
ENST00000647477.1DDX3X-2693377No protein-
 
Retained intron
----
ENST00000642763.1DDX3X-2312940No protein-
 
Retained intron
----
ENST00000480592.6DDX3X-2052333No protein-
 
Retained intron
---TSL:1
ENST00000622373.1DDX3X-2142129No protein-
 
Retained intron
---TSL:NA
ENST00000645253.1DDX3X-2482049No protein-
 
Retained intron
----
ENST00000643820.1DDX3X-2341331No protein-
 
Retained intron
----
ENST00000631641.2DDX3X-2221200No protein-
 
Retained intron
---TSL:3
ENST00000644260.1DDX3X-2401059No protein-
 
Retained intron
----
ENST00000642624.1DDX3X-228710No protein-
 
Retained intron
----
ENST00000646093.1DDX3X-255530No protein-
 
Retained intron
----
ENST00000647219.1DDX3X-266522No protein-
 
Retained intron
----
Description

citron rho-interacting serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1985]

Gene Synonyms

CITK, CRIK, KIAA0949, STK21

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000392521.7CIT-20387362069aaENSP00000376306.2
 
Protein coding
CCDS55891O14578-4 NM_001206999.2MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000261833.11CIT-20185782027aaENSP00000261833.7
 
Protein coding
CCDS9192O14578-1 -GENCODE basicTSL:1
ENST00000677993.1CIT-22878281603aaENSP00000503765.1
 
Protein coding
-A0A7I2V4I0 -GENCODE basic
ENST00000678087.1CIT-22976841566aaENSP00000503863.1
 
Protein coding
-A0A7I2V4A6 -GENCODE basic
ENST00000678652.1CIT-23376191608aaENSP00000504849.1
 
Protein coding
-A0A7I2V692 -GENCODE basic
ENST00000679249.1CIT-23976111617aaENSP00000503976.1
 
Protein coding
-A0A7I2V4H7 -GENCODE basic
ENST00000676849.1CIT-22175921608aaENSP00000503214.1
 
Protein coding
-A0A7I2V692 -GENCODE basic
ENST00000678677.1CIT-23473711537aaENSP00000503253.1
 
Protein coding
-A0A7I2V365 -GENCODE basic
ENST00000392520.2CIT-20252051640aaENSP00000376305.2
 
Protein coding
-H7BYJ3 -TSL:5CDS 5' incomplete
ENST00000678494.1CIT-2322810507aaENSP00000503854.1
 
Protein coding
-A0A7I2YQJ8 -GENCODE basic
ENST00000612548.4CIT-2171799482aaENSP00000482318.1
 
Protein coding
-O14578-2 -GENCODE basicTSL:1
ENST00000536325.1CIT-207329109aaENSP00000443199.1
 
Protein coding
-H0YGG8 -TSL:3CDS 5' and 3' incomplete
ENST00000677438.1CIT-222852051aaENSP00000504095.1
 
Nonsense mediated decay
-A0A7I2V426 --
ENST00000677812.1CIT-225832051aaENSP00000504400.1
 
Nonsense mediated decay
-A0A7I2V426 --
ENST00000677849.1CIT-226809351aaENSP00000503820.1
 
Nonsense mediated decay
-A0A7I2V426 --
ENST00000679120.1CIT-2387591206aaENSP00000502891.1
 
Nonsense mediated decay
-A0A7I2V2G7 --
ENST00000676563.1CIT-218398551aaENSP00000503745.1
 
Nonsense mediated decay
-A0A7I2V426 --
ENST00000678686.1CIT-235255151aaENSP00000503624.1
 
Nonsense mediated decay
-A0A7I2V426 --
ENST00000546026.2CIT-216677104aaENSP00000446105.2
 
Nonsense mediated decay
-F5H4K4 -TSL:3CDS 5' incomplete
ENST00000537607.5CIT-2084958No protein-
 
Processed transcript
---TSL:5
ENST00000677742.1CIT-2243949No protein-
 
Processed transcript
----
ENST00000545913.6CIT-21510799No protein-
 
Retained intron
---TSL:5
ENST00000678236.1CIT-23110096No protein-
 
Retained intron
----
ENST00000679285.1CIT-2406132No protein-
 
Retained intron
----
ENST00000676693.1CIT-2195965No protein-
 
Retained intron
----
ENST00000677738.1CIT-2235836No protein-
 
Retained intron
----
ENST00000676833.1CIT-2205546No protein-
 
Retained intron
----
ENST00000679061.1CIT-2374637No protein-
 
Retained intron
----
ENST00000677927.1CIT-2274511No protein-
 
Retained intron
----
ENST00000678708.1CIT-2363368No protein-
 
Retained intron
----
ENST00000543324.2CIT-2113363No protein-
 
Retained intron
---TSL:3
ENST00000488203.1CIT-2052283No protein-
 
Retained intron
---TSL:2
ENST00000678155.1CIT-2301177No protein-
 
Retained intron
----
ENST00000544588.1CIT-212594No protein-
 
Retained intron
---TSL:4
ENST00000543239.1CIT-210586No protein-
 
Retained intron
---TSL:4
ENST00000536008.1CIT-206567No protein-
 
Retained intron
---TSL:4
ENST00000544800.1CIT-213564No protein-
 
Retained intron
---TSL:4
ENST00000538073.5CIT-209533No protein-
 
Retained intron
---TSL:4
ENST00000544872.1CIT-214524No protein-
 
Retained intron
---TSL:4
ENST00000469414.1CIT-204441No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 3, Coding exons: 0, Transcript length: 594 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000544588.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x27917da0)