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Description

sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]

Gene Synonyms

FEB3, GEFSP2, HBSCI, NAC1, Nav1.1, SCN1, SMEI

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SCN1A-224ENST00000674923.1119402009aaENSP00000501589.1
 
Protein coding
CCDS54413-NM_001165963.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT1
SCN1A-218ENST00000641575.1128741997aaENSP00000492917.1
 
Protein coding
CCDS86891A0A286YF26 -GENCODE basic
SCN1A-201ENST00000303395.9118532009aaENSP00000303540.4
 
Protein coding
CCDS54413P35498-1 -GENCODE basicAPPRIS P4TSL:5
SCN1A-216ENST00000637988.185621998aaENSP00000490780.1
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS ALT1TSL:5
SCN1A-208ENST00000635750.182991998aaENSP00000490799.1
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS ALT1TSL:5
SCN1A-202ENST00000375405.780971998aaENSP00000364554.3
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS ALT1TSL:5
SCN1A-203ENST00000409050.159461981aaENSP00000386312.1
 
Protein coding
CCDS54414P35498-3 -GENCODE basicTSL:5
SCN1A-219ENST00000641603.1125061915aaENSP00000492945.1
 
Protein coding
-A0A286YEQ8 -GENCODE basic
SCN1A-209ENST00000635776.1101071618aaENSP00000490692.1
 
Protein coding
-A0A1B0GVX7 -GENCODE basicTSL:5
SCN1A-217ENST00000640036.181311998aaENSP00000491573.1
 
Protein coding
-A0A1W2PPJ3 -GENCODE basicTSL:5
SCN1A-214ENST00000637285.21333aaENSP00000490612.1
 
Protein coding
---TSL:5CDS 3' incomplete
SCN1A-220ENST00000641996.112903149aaENSP00000493054.1
 
Nonsense mediated decay
-A0A286YFA8 --
SCN1A-211ENST00000636194.18508829aaENSP00000490288.1
 
Nonsense mediated decay
-A0A1B0GUX7 -TSL:5
SCN1A-222ENST00000671940.18315629aaENSP00000500336.1
 
Nonsense mediated decay
-A0A5F9ZHI6 --
SCN1A-213ENST00000637038.14268331aaENSP00000490184.1
 
Nonsense mediated decay
-A0A1B0GUN7 -TSL:5CDS 5' incomplete
SCN1A-212ENST00000636759.13606145aaENSP00000490895.1
 
Nonsense mediated decay
-A0A1B0GWE6 -TSL:5
SCN1A-210ENST00000635893.116830aaENSP00000489986.1
 
Nonsense mediated decay
-A0A1B0GU68 -TSL:5CDS 5' incomplete
SCN1A-221ENST00000642141.1921No protein-
 
Processed transcript
----
SCN1A-223ENST00000673490.110569No protein-
 
Retained intron
----
SCN1A-215ENST00000637968.14614No protein-
 
Retained intron
---TSL:5
SCN1A-206ENST00000507401.2711No protein-
 
Retained intron
---TSL:3
SCN1A-207ENST00000625916.1560No protein-
 
Retained intron
---TSL:4
SCN1A-204ENST00000473295.2544No protein-
 
Retained intron
---TSL:4
SCN1A-205ENST00000491429.1542No protein-
 
Retained intron
---TSL:4
Description

leucine rich repeat containing 23 [Source:HGNC Symbol;Acc:HGNC:19138]

Gene Synonyms

B7, LRPB7

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
LRRC23-209ENST00000443597.71698343aaENSP00000390932.2
 
Protein coding
CCDS8569Q53EV4-1 NM_001135217.2MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
LRRC23-201ENST00000007969.121615343aaENSP00000007969.8
 
Protein coding
CCDS8569Q53EV4-1 -GENCODE basicAPPRIS P2TSL:1
LRRC23-202ENST00000323702.91208312aaENSP00000317464.5
 
Protein coding
CCDS8568Q53EV4-2 -GENCODE basicAPPRIS ALT2TSL:1
LRRC23-207ENST00000433346.51387230aaENSP00000402554.1
 
Protein coding
-C9JKE8 -GENCODE basicTSL:5
LRRC23-215ENST00000622489.41061202aaENSP00000479128.1
 
Protein coding
-E9PDZ4 -GENCODE basicTSL:5
LRRC23-208ENST00000436789.5796216aaENSP00000396049.1
 
Protein coding
-C9JEW3 -GENCODE basicTSL:3
LRRC23-205ENST00000429740.1671202aaENSP00000397192.1
 
Protein coding
-E9PDZ4 -GENCODE basicTSL:1
LRRC23-203ENST00000415834.557294aaENSP00000408066.1
 
Protein coding
-C9JQN5 -TSL:4CDS 3' incomplete
LRRC23-211ENST00000451681.5141262aaENSP00000412744.1
 
Nonsense mediated decay
-F2Z299 -TSL:5
LRRC23-206ENST00000431207.5114062aaENSP00000392623.1
 
Nonsense mediated decay
-F2Z299 -TSL:3
LRRC23-204ENST00000428946.596962aaENSP00000394566.1
 
Nonsense mediated decay
-F2Z299 -TSL:3
LRRC23-210ENST00000449039.5729No protein-
 
Processed transcript
---TSL:3
LRRC23-212ENST00000457146.5598No protein-
 
Processed transcript
---TSL:4
LRRC23-213ENST00000472633.1474No protein-
 
Processed transcript
---TSL:2
LRRC23-214ENST00000486401.1552No protein-
 
Retained intron
---TSL:1
Description

myelin basic protein a [Source:ZFIN;Acc:ZDB-GENE-030128-2]

Gene Synonyms

cb274, fj33b11, mbp, wu:fj33b11, wu:fq15b02, zgc:136630

Location
NameTranscript IDbpProteinTranslation IDBiotypeUniProt MatchFlags
mbpa-201ENSDART00000052556.8171988aaENSDARP00000052555.6
 
Protein coding
Q5I2C7 -
mbpa-202ENSDART00000128196.41610100aaENSDARP00000111439.2
 
Protein coding
E7F0U0 APPRIS ALT2
mbpa-211ENSDART00000151442.3869137aaENSDARP00000126314.1
 
Protein coding
I3ITP3 APPRIS P5
mbpa-206ENSDART00000149259.4861125aaENSDARP00000124357.2
 
Protein coding
F8W3M5 -
mbpa-203ENSDART00000148424.376195aaENSDARP00000124006.1
 
Protein coding
F8W3W8 -
mbpa-209ENSDART00000150168.376179aaENSDARP00000124447.1
 
Protein coding
F8W3A0 -
mbpa-208ENSDART00000149658.3737130aaENSDARP00000124434.1
 
Protein coding
F8W3B3 APPRIS ALT2
mbpa-205ENSDART00000148797.358191aaENSDARP00000124675.1
 
Protein coding
F8W2M5 -
mbpa-210ENSDART00000151272.3560121aaENSDARP00000125971.1
 
Protein coding
I3ISS8 -
mbpa-207ENSDART00000149639.2497107aaENSDARP00000124016.1
 
Protein coding
F8W3V8 APPRIS ALT2
mbpa-204ENSDART00000148445.21043No protein-
 
Retained intron
--
Description

alsin Rho guanine nucleotide exchange factor ALS2 [Source:HGNC Symbol;Acc:HGNC:443]

Gene Synonyms

ALS2CR6

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ALS2-201ENST00000264276.1166751657aaENSP00000264276.6
 
Protein coding
CCDS42800Q96Q42-1 NM_020919.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ALS2-254ENST00000680861.167511657aaENSP00000505043.1
 
Protein coding
CCDS42800--GENCODE basicAPPRIS P2
ALS2-233ENST00000680163.166431657aaENSP00000505092.1
 
Protein coding
CCDS42800--GENCODE basicAPPRIS P2
ALS2-218ENST00000679516.165171657aaENSP00000505187.1
 
Protein coding
CCDS42800--GENCODE basicAPPRIS P2
ALS2-235ENST00000680188.12911396aaENSP00000505665.1
 
Protein coding
CCDS46492--GENCODE basic
ALS2-217ENST00000679503.12728396aaENSP00000505968.1
 
Protein coding
CCDS46492--GENCODE basic
ALS2-206ENST00000467448.52677396aaENSP00000429223.1
 
Protein coding
CCDS46492Q96Q42-2 -GENCODE basicTSL:1
ALS2-202ENST00000409632.72599396aaENSP00000386384.3
 
Protein coding
CCDS46492J3KQ33 -GENCODE basicTSL:4
ALS2-230ENST00000680000.176041651aaENSP00000506173.1
 
Protein coding
---GENCODE basic
ALS2-240ENST00000680497.166191691aaENSP00000505954.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
ALS2-269ENST00000681619.165971656aaENSP00000505071.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
ALS2-250ENST00000680759.164321601aaENSP00000505848.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
ALS2-275ENST00000681808.164231598aaENSP00000505219.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
ALS2-251ENST00000680814.157271614aaENSP00000505710.1
 
Protein coding
---GENCODE basic
ALS2-258ENST00000681152.156471237aaENSP00000505388.1
 
Protein coding
---GENCODE basic
ALS2-262ENST00000681303.148951237aaENSP00000505576.1
 
Protein coding
---GENCODE basic
ALS2-268ENST00000681558.14378883aaENSP00000505568.1
 
Protein coding
---GENCODE basic
ALS2-267ENST00000681495.14236836aaENSP00000506085.1
 
Protein coding
---GENCODE basic
ALS2-220ENST00000679550.13815812aaENSP00000506193.1
 
Protein coding
-A0A0S2Z5Q7 -GENCODE basic
ALS2-229ENST00000679949.13694796aaENSP00000505232.1
 
Protein coding
---GENCODE basic
ALS2-228ENST00000679939.13692812aaENSP00000505704.1
 
Protein coding
-A0A0S2Z5Q7 -GENCODE basic
ALS2-237ENST00000680287.12981812aaENSP00000506547.1
 
Protein coding
-A0A0S2Z5Q7 -GENCODE basic
ALS2-264ENST00000681312.12493367aaENSP00000506656.1
 
Protein coding
---GENCODE basic
ALS2-226ENST00000679728.12224383aaENSP00000504981.1
 
Protein coding
---GENCODE basic
ALS2-203ENST00000410052.1559106aaENSP00000386948.1
 
Protein coding
-J3KQ43 -TSL:4CDS 3' incomplete
ALS2-216ENST00000679435.162501657aaENSP00000505218.1
 
Nonsense mediated decay
CCDS42800---
ALS2-213ENST00000679409.17039490aaENSP00000506531.1
 
Nonsense mediated decay
----
ALS2-242ENST00000680569.16922792aaENSP00000505522.1
 
Nonsense mediated decay
----
ALS2-272ENST00000681716.16834792aaENSP00000505078.1
 
Nonsense mediated decay
----
ALS2-227ENST00000679916.167441264aaENSP00000506172.1
 
Nonsense mediated decay
----
ALS2-255ENST00000680927.167221313aaENSP00000505473.1
 
Nonsense mediated decay
----
ALS2-274ENST00000681768.16704812aaENSP00000506311.1
 
Nonsense mediated decay
-A0A0S2Z5Q7 --
ALS2-260ENST00000681256.16670684aaENSP00000505446.1
 
Nonsense mediated decay
----
ALS2-241ENST00000680508.166191620aaENSP00000505749.1
 
Nonsense mediated decay
----
ALS2-221ENST00000679618.16605971aaENSP00000506274.1
 
Nonsense mediated decay
----
ALS2-248ENST00000680726.165801565aaENSP00000505505.1
 
Nonsense mediated decay
----
ALS2-232ENST00000680149.165771564aaENSP00000506497.1
 
Nonsense mediated decay
----
ALS2-253ENST00000680828.16541748aaENSP00000505249.1
 
Nonsense mediated decay
----
ALS2-231ENST00000680135.16535657aaENSP00000506211.1
 
Nonsense mediated decay
-A0A0S2Z5I4 --
ALS2-236ENST00000680236.16530955aaENSP00000506212.1
 
Nonsense mediated decay
----
ALS2-259ENST00000681250.14824501aaENSP00000505684.1
 
Nonsense mediated decay
----
ALS2-204ENST00000439495.64499539aaENSP00000403832.2
 
Nonsense mediated decay
-H0Y696 -TSL:2
ALS2-245ENST00000680644.13456395aaENSP00000505738.1
 
Nonsense mediated decay
----
ALS2-257ENST00000681144.1277568aaENSP00000505348.1
 
Nonsense mediated decay
----
ALS2-224ENST00000679686.16377No protein-
 
Processed transcript
----
ALS2-243ENST00000680630.16272No protein-
 
Processed transcript
----
ALS2-249ENST00000680737.16108No protein-
 
Processed transcript
----
ALS2-273ENST00000681758.15760No protein-
 
Processed transcript
----
ALS2-244ENST00000680634.12767No protein-
 
Processed transcript
----
ALS2-211ENST00000494017.62353No protein-
 
Processed transcript
---TSL:4
ALS2-212ENST00000496244.5768No protein-
 
Processed transcript
---TSL:3
ALS2-210ENST00000489440.5727No protein-
 
Processed transcript
---TSL:3
ALS2-209ENST00000483703.1505No protein-
 
Processed transcript
---TSL:3
ALS2-205ENST00000462747.1491No protein-
 
Processed transcript
---TSL:3
ALS2-225ENST00000679701.19251No protein-
 
Retained intron
----
ALS2-256ENST00000680939.19208No protein-
 
Retained intron
----
ALS2-222ENST00000679630.18108No protein-
 
Retained intron
----
ALS2-214ENST00000679416.17763No protein-
 
Retained intron
----
ALS2-263ENST00000681307.17372No protein-
 
Retained intron
----
ALS2-261ENST00000681279.17130No protein-
 
Retained intron
----
ALS2-266ENST00000681461.17027No protein-
 
Retained intron
----
ALS2-234ENST00000680174.16950No protein-
 
Retained intron
----
ALS2-215ENST00000679427.16134No protein-
 
Retained intron
----
ALS2-247ENST00000680723.15404No protein-
 
Retained intron
----
ALS2-208ENST00000482891.65399No protein-
 
Retained intron
---TSL:1
ALS2-265ENST00000681378.15086No protein-
 
Retained intron
----
ALS2-239ENST00000680441.14823No protein-
 
Retained intron
----
ALS2-223ENST00000679635.14520No protein-
 
Retained intron
----
ALS2-271ENST00000681692.14218No protein-
 
Retained intron
----
ALS2-246ENST00000680722.14059No protein-
 
Retained intron
----
ALS2-238ENST00000680404.13771No protein-
 
Retained intron
----
ALS2-270ENST00000681663.13164No protein-
 
Retained intron
----
ALS2-207ENST00000482789.63148No protein-
 
Retained intron
---TSL:1
ALS2-252ENST00000680819.12895No protein-
 
Retained intron
----
ALS2-219ENST00000679549.12609No protein-
 
Retained intron
----
Description

apolipoprotein D [Source:MGI Symbol;Acc:MGI:88056]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Apod-203ENSMUST00000130560.82074189aaENSMUSP00000119827.2
 
Protein coding
CCDS28105P51910 GENCODE basicAPPRIS P1TSL:1
Apod-202ENSMUST00000115230.21070189aaENSMUSP00000110885.2
 
Protein coding
CCDS28105P51910 GENCODE basicAPPRIS P1TSL:1
Apod-201ENSMUST00000023207.15979No protein-
 
Retained intron
--TSL:1
Apod-205ENSMUST00000155682.2422No protein-
 
Retained intron
--TSL:2
Apod-206ENSMUST00000156456.8371No protein-
 
Retained intron
--TSL:3
Apod-204ENSMUST00000145837.2362No protein-
 
Retained intron
--TSL:3
Description

importin 8 [Source:MGI Symbol;Acc:MGI:2444611]

Gene Synonyms

6230418K12Rik, C130009K11Rik, OM-1, Om1, Ranbp8

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Ipo8-201ENSMUST00000048418.1453601010aaENSMUSP00000046759.8
 
Protein coding
CCDS39719Q7TMY7-1 GENCODE basicAPPRIS P1TSL:1
Ipo8-212ENSMUST00000239062.23641513aaENSMUSP00000159101.2
 
Protein coding
-A0A5F8MQ75 CDS 5' incomplete
Ipo8-206ENSMUST00000145960.21262361aaENSMUSP00000117365.2
 
Protein coding
-B2KGD7 TSL:1CDS 3' incomplete
Ipo8-210ENSMUST00000204936.2140835aaENSMUSP00000144744.2
 
Nonsense mediated decay
-A0A0N4SUM9 TSL:5
Ipo8-204ENSMUST00000144357.4813No protein-
 
Processed transcript
--TSL:3
Ipo8-203ENSMUST00000136896.86056No protein-
 
Retained intron
--TSL:1
Ipo8-209ENSMUST00000204424.24916No protein-
 
Retained intron
--TSL:NA
Ipo8-205ENSMUST00000145743.83845No protein-
 
Retained intron
--TSL:1
Ipo8-211ENSMUST00000205196.22907No protein-
 
Retained intron
--TSL:NA
Ipo8-208ENSMUST00000204016.22413No protein-
 
Retained intron
--TSL:NA
Ipo8-202ENSMUST00000123842.8829No protein-
 
Retained intron
--TSL:2
Ipo8-207ENSMUST00000147955.2553No protein-
 
Retained intron
--TSL:3
Description

sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]

Gene Synonyms

DYT11

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SGCE-298ENST00000648936.21868437aaENSP00000497130.1
 
Protein coding
CCDS5637O43556-1 NM_003919.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4
SGCE-281ENST00000646489.11733473aaENSP00000496268.1
 
Protein coding
CCDS87523A0A2R8YGQ3 -GENCODE basicAPPRIS ALT1
SGCE-205ENST00000445866.71704462aaENSP00000398930.2
 
Protein coding
CCDS47643O43556-4 -GENCODE basicTSL:5
SGCE-231ENST00000643272.11677464aaENSP00000494488.1
 
Protein coding
CCDS87522A0A2R8Y5J3 -GENCODE basic
SGCE-206ENST00000447873.61672428aaENSP00000388734.1
 
Protein coding
CCDS87520C9JR67 -GENCODE basicTSL:1
SGCE-224ENST00000642933.11634451aaENSP00000496237.1
 
Protein coding
CCDS47642O43556-3 -GENCODE basic
SGCE-204ENST00000437425.71532396aaENSP00000394061.2
 
Protein coding
CCDS75634E9PEH6 -GENCODE basicTSL:2
SGCE-214ENST00000642394.11399387aaENSP00000493751.1
 
Protein coding
CCDS87519A0A2R8Y448 -GENCODE basic
SGCE-286ENST00000646879.13474426aaENSP00000495209.1
 
Protein coding
-A0A2R8Y628 -GENCODE basic
SGCE-262ENST00000645109.12949454aaENSP00000495931.1
 
Protein coding
-A0A2R8Y4E3 -GENCODE basic
SGCE-229ENST00000643193.12575458aaENSP00000496559.1
 
Protein coding
-A0A2R8YH84 -GENCODE basic
SGCE-201ENST00000415788.31979471aaENSP00000405313.2
 
Protein coding
-B7Z2R4 -GENCODE basicTSL:2
SGCE-295ENST00000647351.11977487aaENSP00000494556.1
 
Protein coding
-A0A2R8Y5M2 -GENCODE basic
SGCE-244ENST00000644122.11779482aaENSP00000495236.1
 
Protein coding
-A0A2R8Y638 -GENCODE basic
SGCE-261ENST00000645101.11739491aaENSP00000494975.1
 
Protein coding
-A0A2R8YFA5 -GENCODE basic
SGCE-257ENST00000644816.11733460aaENSP00000494898.1
 
Protein coding
-A0A2R8Y5X5 -GENCODE basicAPPRIS ALT1
SGCE-248ENST00000644375.11715473aaENSP00000494315.1
 
Protein coding
-A0A2R8YD68 -GENCODE basic
SGCE-250ENST00000644551.11713464aaENSP00000493981.1
 
Protein coding
-A0A2R8Y4P8 -GENCODE basic
SGCE-219ENST00000642707.11713489aaENSP00000495270.1
 
Protein coding
-A0A2R8YE48 -GENCODE basic
SGCE-255ENST00000644681.11701360aaENSP00000496455.1
 
Protein coding
-A0A2R8Y7Q5 -GENCODE basic
SGCE-227ENST00000643128.11692418aaENSP00000496678.1
 
Protein coding
-A0A2R8Y821 -GENCODE basic
SGCE-288ENST00000646943.11667485aaENSP00000494666.1
 
Protein coding
-A0A2R8Y5R7 -GENCODE basic
SGCE-276ENST00000646137.11656446aaENSP00000495199.1
 
Protein coding
-A0A2R8Y621 -GENCODE basic
SGCE-270ENST00000645725.11652455aaENSP00000495480.1
 
Protein coding
-A0A2R8Y6U6 -GENCODE basic
SGCE-240ENST00000643903.11637409aaENSP00000495165.1
 
Protein coding
-A0A2R8YE16 -GENCODE basic
SGCE-266ENST00000645535.11613360aaENSP00000493984.1
 
Protein coding
-A0A2R8Y7Q5 -GENCODE basic
SGCE-292ENST00000647096.11610500aaENSP00000494192.1
 
Protein coding
-A0A2R8Y504 -GENCODE basic
SGCE-215ENST00000642441.11592478aaENSP00000495994.1
 
Protein coding
-A0A2R8YEY2 -GENCODE basic
SGCE-251ENST00000644609.11586450aaENSP00000496045.1
 
Protein coding
-A0A2R8Y7J1 -GENCODE basic
SGCE-243ENST00000644116.11577476aaENSP00000495276.1
 
Protein coding
-A0A2R8Y652 -GENCODE basic
SGCE-274ENST00000646098.11566429aaENSP00000495591.1
 
Protein coding
-A0A2R8Y6V3 -GENCODE basic
SGCE-277ENST00000646265.11564481aaENSP00000494587.1
 
Protein coding
-A0A2R8Y5J6 -CDS 5' incomplete
SGCE-294ENST00000647334.11554482aaENSP00000495114.1
 
Protein coding
-A0A2R8Y5X0 -CDS 5' incomplete
SGCE-293ENST00000647110.11533453aaENSP00000494738.1
 
Protein coding
-A0A2R8Y5Q3 -CDS 5' incomplete
SGCE-289ENST00000647018.11532454aaENSP00000493722.1
 
Protein coding
-A0A2R8Y4E3 -GENCODE basic
SGCE-275ENST00000646119.11493447aaENSP00000494615.1
 
Protein coding
-A0A2R8Y5P8 -CDS 5' incomplete
SGCE-256ENST00000644682.11492450aaENSP00000493509.1
 
Protein coding
-A0A2R8Y2R1 -CDS 5' incomplete
SGCE-265ENST00000645445.11475420aaENSP00000493603.1
 
Protein coding
-A0A2R8Y416 -CDS 5' incomplete
SGCE-263ENST00000645262.11417410aaENSP00000494164.1
 
Protein coding
-A0A2R8YE99 -GENCODE basic
SGCE-203ENST00000428696.71368444aaENSP00000397536.3
 
Protein coding
-A0A2U3TZN7 -GENCODE basicTSL:1
SGCE-291ENST00000647048.11284388aaENSP00000495468.1
 
Protein coding
-A0A2R8Y6D4 -CDS 5' incomplete
SGCE-225ENST00000643020.11204402aaENSP00000494457.1
 
Protein coding
-A0A2R8Y5H7 -CDS 5' and 3' incomplete
SGCE-228ENST00000643160.1927197aaENSP00000493950.1
 
Protein coding
-A0A2R8YCT2 -CDS 5' incomplete
SGCE-210ENST00000522045.540841aaENSP00000431080.1
 
Protein coding
-H0YC75 -TSL:3CDS 5' incomplete
SGCE-272ENST00000645804.138638aaENSP00000494688.1
 
Protein coding
-A0A2R8YDK8 -CDS 5' incomplete
SGCE-202ENST00000425444.2197943aaENSP00000391892.1
 
Nonsense mediated decay
-A0A2R8Y6I4 -TSL:3
SGCE-237ENST00000643605.1176062aaENSP00000496480.1
 
Nonsense mediated decay
-A0A2R8YH48 --
SGCE-279ENST00000646434.1175543aaENSP00000496613.1
 
Nonsense mediated decay
-A0A2R8Y831 -CDS 5' incomplete
SGCE-238ENST00000643610.11745454aaENSP00000494350.1
 
Nonsense mediated decay
-A0A2R8Y4X1 --
SGCE-280ENST00000646466.1172443aaENSP00000493511.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-242ENST00000644087.1169743aaENSP00000495249.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-252ENST00000644639.11696161aaENSP00000496391.1
 
Nonsense mediated decay
-A0A2R8Y7M6 --
SGCE-282ENST00000646559.1168643aaENSP00000495838.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-283ENST00000646600.1167043aaENSP00000494041.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-218ENST00000642638.1164643aaENSP00000495555.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-226ENST00000643041.11601370aaENSP00000495311.1
 
Nonsense mediated decay
-A0A2R8Y6G8 --
SGCE-241ENST00000643991.1143682aaENSP00000494489.1
 
Nonsense mediated decay
-A0A2R8Y5F3 -CDS 5' incomplete
SGCE-212ENST00000642291.11382324aaENSP00000495656.1
 
Nonsense mediated decay
-A0A2R8Y6Y5 -CDS 5' incomplete
SGCE-278ENST00000646301.1136014aaENSP00000495603.1
 
Nonsense mediated decay
-A0A2R8Y6Z8 -CDS 5' incomplete
SGCE-230ENST00000643206.1135945aaENSP00000496172.1
 
Nonsense mediated decay
-A0A2R8YGV6 --
SGCE-236ENST00000643568.11323309aaENSP00000495735.1
 
Nonsense mediated decay
-A0A2R8Y6S4 -CDS 5' incomplete
SGCE-284ENST00000646682.199843aaENSP00000496461.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-253ENST00000644658.1891161aaENSP00000494540.1
 
Nonsense mediated decay
-A0A2R8Y5L4 -CDS 5' incomplete
SGCE-259ENST00000644966.1872105aaENSP00000495105.1
 
Nonsense mediated decay
-A0A2R8YDZ5 -CDS 5' incomplete
SGCE-245ENST00000644201.1837173aaENSP00000495044.1
 
Nonsense mediated decay
-A0A2R8Y696 -CDS 5' incomplete
SGCE-273ENST00000645920.180443aaENSP00000494490.1
 
Nonsense mediated decay
-A0A2R8Y6I4 --
SGCE-207ENST00000450385.669060aaENSP00000398344.2
 
Nonsense mediated decay
-C9J4J9 -TSL:3
SGCE-211ENST00000642169.166145aaENSP00000496346.1
 
Nonsense mediated decay
-A0A2R8YGV6 --
SGCE-254ENST00000644674.11369No protein-
 
Processed transcript
----
SGCE-268ENST00000645624.1903No protein-
 
Processed transcript
----
SGCE-296ENST00000647379.1815No protein-
 
Processed transcript
----
SGCE-234ENST00000643368.1519No protein-
 
Processed transcript
----
SGCE-258ENST00000644924.1395No protein-
 
Processed transcript
----
SGCE-220ENST00000642754.16270No protein-
 
Retained intron
----
SGCE-290ENST00000647031.14072No protein-
 
Retained intron
----
SGCE-297ENST00000647533.13082No protein-
 
Retained intron
----
SGCE-264ENST00000645390.12607No protein-
 
Retained intron
----
SGCE-287ENST00000646910.12473No protein-
 
Retained intron
----
SGCE-232ENST00000643324.12420No protein-
 
Retained intron
----
SGCE-239ENST00000643714.12390No protein-
 
Retained intron
----
SGCE-235ENST00000643491.12361No protein-
 
Retained intron
----
SGCE-249ENST00000644533.12356No protein-
 
Retained intron
----
SGCE-260ENST00000645027.12353No protein-
 
Retained intron
----
SGCE-247ENST00000644373.12332No protein-
 
Retained intron
----
SGCE-216ENST00000642497.12325No protein-
 
Retained intron
----
SGCE-267ENST00000645579.12292No protein-
 
Retained intron
----
SGCE-246ENST00000644268.12036No protein-
 
Retained intron
----
SGCE-223ENST00000642904.11895No protein-
 
Retained intron
----
SGCE-221ENST00000642759.11830No protein-
 
Retained intron
----
SGCE-213ENST00000642353.11781No protein-
 
Retained intron
----
SGCE-233ENST00000643358.11722No protein-
 
Retained intron
----
SGCE-271ENST00000645767.11538No protein-
 
Retained intron
----
SGCE-285ENST00000646761.11477No protein-
 
Retained intron
----
SGCE-217ENST00000642564.11462No protein-
 
Retained intron
----
SGCE-222ENST00000642802.11359No protein-
 
Retained intron
----
SGCE-269ENST00000645665.1805No protein-
 
Retained intron
----
SGCE-209ENST00000472326.2453No protein-
 
Retained intron
---TSL:2
SGCE-208ENST00000462731.2418No protein-
 
Retained intron
---TSL:2
Description

IST1 factor associated with ESCRT-III [Source:HGNC Symbol;Acc:HGNC:28977]

Gene Synonyms

CHMP8, KIAA0174

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
IST1-203ENST00000378799.114561366aaENSP00000368076.6
 
Protein coding
CCDS59272P53990-4 NM_001270975.2MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
IST1-208ENST00000535424.54082379aaENSP00000438399.1
 
Protein coding
CCDS59271P53990-5 -GENCODE basicTSL:5
IST1-226ENST00000606369.53583218aaENSP00000475853.1
 
Protein coding
CCDS59274P53990-6 -GENCODE basicTSL:2
IST1-201ENST00000329908.122356360aaENSP00000330408.8
 
Protein coding
CCDS10905P53990-3 -GENCODE basicTSL:1
IST1-202ENST00000378798.92255335aaENSP00000368075.5
 
Protein coding
CCDS59273P53990-2 -GENCODE basicTSL:1
IST1-219ENST00000541571.61962366aaENSP00000455860.1
 
Protein coding
CCDS59272P53990-4 -GENCODE basicAPPRIS P1TSL:2
IST1-221ENST00000544564.51500366aaENSP00000457844.1
 
Protein coding
CCDS59272P53990-4 -GENCODE basicAPPRIS P1TSL:2
IST1-215ENST00000538850.51125218aaENSP00000463711.1
 
Protein coding
CCDS59274P53990-6 -GENCODE basicTSL:3
IST1-206ENST00000456820.22031289aaENSP00000414942.2
 
Protein coding
-J3KR23 -TSL:5CDS 5' incomplete
IST1-220ENST00000541918.5908253aaENSP00000455805.1
 
Protein coding
-H3BUI0 -TSL:5CDS 3' incomplete
IST1-211ENST00000537613.5894253aaENSP00000457646.1
 
Protein coding
-H3BUI0 -TSL:2CDS 3' incomplete
IST1-207ENST00000534994.5674206aaENSP00000454541.1
 
Protein coding
-H3BMU1 -TSL:5CDS 3' incomplete
IST1-216ENST00000539186.5542166aaENSP00000455757.1
 
Protein coding
-H3BQF7 -TSL:4CDS 3' incomplete
IST1-212ENST00000538104.553140aaENSP00000455590.1
 
Protein coding
-H3BQ38 -TSL:4CDS 3' incomplete
IST1-204ENST00000424485.6521141aaENSP00000398505.2
 
Protein coding
-F5GXM3 -TSL:4CDS 3' incomplete
IST1-225ENST00000568581.5503105aaENSP00000456200.1
 
Protein coding
-H3BRE2 -TSL:5CDS 3' incomplete
IST1-217ENST00000540296.547659aaENSP00000455409.1
 
Protein coding
-H3BPP6 -TSL:4CDS 3' incomplete
IST1-227ENST00000626438.112641aaENSP00000486751.1
 
Protein coding
-E9PF00 -GENCODE basicTSL:5
IST1-205ENST00000439924.6184141aaENSP00000410081.2
 
Nonsense mediated decay
-E9PF00 -TSL:5
IST1-209ENST00000536027.182385aaENSP00000463833.1
 
Nonsense mediated decay
-J3QQP8 -TSL:3
IST1-213ENST00000538565.51245No protein-
 
Processed transcript
---TSL:2
IST1-223ENST00000545518.1710No protein-
 
Retained intron
---TSL:2
IST1-218ENST00000541180.1635No protein-
 
Retained intron
---TSL:1
IST1-222ENST00000545388.2630No protein-
 
Retained intron
---TSL:2
IST1-224ENST00000566536.5612No protein-
 
Retained intron
---TSL:2
IST1-210ENST00000537571.1603No protein-
 
Retained intron
---TSL:2
IST1-214ENST00000538709.1491No protein-
 
Retained intron
---TSL:2
Description

VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VRK1-201ENST00000216639.81663396aaENSP00000216639.3
 
Protein coding
CCDS9947Q99986 NM_003384.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VRK1-240ENST00000680756.12783396aaENSP00000506648.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-251ENST00000681344.11960396aaENSP00000506151.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-220ENST00000679816.11765396aaENSP00000506525.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-252ENST00000681355.11719396aaENSP00000506214.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-230ENST00000680335.15188375aaENSP00000505806.1
 
Protein coding
---GENCODE basic
VRK1-250ENST00000681249.12411395aaENSP00000506013.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-254ENST00000681419.11823393aaENSP00000505512.1
 
Protein coding
---GENCODE basic
VRK1-204ENST00000553683.21816420aaENSP00000451412.2
 
Protein coding
-H0YJF7 -GENCODE basicTSL:3
VRK1-239ENST00000680724.11813395aaENSP00000504891.1
 
Protein coding
---GENCODE basic
VRK1-219ENST00000679770.11704448aaENSP00000505214.1
 
Protein coding
---GENCODE basic
VRK1-249ENST00000681195.11697395aaENSP00000504933.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-238ENST00000680683.11682403aaENSP00000506334.1
 
Protein coding
---GENCODE basic
VRK1-216ENST00000679727.11673394aaENSP00000505844.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-223ENST00000679918.11638420aaENSP00000505439.1
 
Protein coding
---GENCODE basic
VRK1-241ENST00000680849.11634395aaENSP00000505602.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-256ENST00000681493.11625394aaENSP00000506429.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-212ENST00000679462.11527437aaENSP00000506011.1
 
Protein coding
---GENCODE basic
VRK1-226ENST00000680007.11525420aaENSP00000505683.1
 
Protein coding
---GENCODE basic
VRK1-242ENST00000680851.11511395aaENSP00000505159.1
 
Protein coding
---GENCODE basic
VRK1-222ENST00000679903.11444393aaENSP00000506022.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-237ENST00000680538.11435366aaENSP00000505611.1
 
Protein coding
---GENCODE basic
VRK1-263ENST00000681785.11375356aaENSP00000505166.1
 
Protein coding
---CDS 3' incomplete
VRK1-209ENST00000557352.21320394aaENSP00000451682.2
 
Protein coding
-H0YJJ9 -GENCODE basicTSL:5
VRK1-217ENST00000679736.11202244aaENSP00000506517.1
 
Protein coding
---GENCODE basic
VRK1-235ENST00000680509.11130356aaENSP00000505209.1
 
Protein coding
---CDS 3' incomplete
VRK1-248ENST00000681176.11009314aaENSP00000505454.1
 
Protein coding
---GENCODE basic
VRK1-208ENST00000557222.6922228aaENSP00000450820.2
 
Protein coding
-H0YJ50 -TSL:5CDS 3' incomplete
VRK1-257ENST00000681524.16456244aaENSP00000505783.1
 
Nonsense mediated decay
----
VRK1-234ENST00000680387.12689444aaENSP00000504908.1
 
Nonsense mediated decay
----
VRK1-247ENST00000681101.12040413aaENSP00000506564.1
 
Nonsense mediated decay
----
VRK1-224ENST00000679941.12036375aaENSP00000506520.1
 
Nonsense mediated decay
----
VRK1-244ENST00000680993.11932172aaENSP00000505511.1
 
Nonsense mediated decay
----
VRK1-253ENST00000681363.11882372aaENSP00000505564.1
 
Nonsense mediated decay
----
VRK1-262ENST00000681778.11869375aaENSP00000506049.1
 
Nonsense mediated decay
----
VRK1-218ENST00000679758.11681362aaENSP00000505539.1
 
Nonsense mediated decay
----
VRK1-225ENST00000679977.11657249aaENSP00000504897.1
 
Nonsense mediated decay
----
VRK1-210ENST00000679365.11635442aaENSP00000505882.1
 
Nonsense mediated decay
----
VRK1-258ENST00000681538.11580321aaENSP00000506662.1
 
Nonsense mediated decay
----
VRK1-215ENST00000679650.11528101aaENSP00000505156.1
 
Nonsense mediated decay
----
VRK1-243ENST00000680922.11520244aaENSP00000506480.1
 
Nonsense mediated decay
----
VRK1-261ENST00000681695.1140283aaENSP00000506225.1
 
Nonsense mediated decay
----
VRK1-259ENST00000681598.1139683aaENSP00000506128.1
 
Nonsense mediated decay
----
VRK1-236ENST00000680526.1134783aaENSP00000505595.1
 
Nonsense mediated decay
----
VRK1-260ENST00000681677.1129746aaENSP00000505010.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-214ENST00000679533.1128772aaENSP00000505873.1
 
Nonsense mediated decay
----
VRK1-255ENST00000681474.11280302aaENSP00000505569.1
 
Nonsense mediated decay
----
VRK1-245ENST00000681061.1121146aaENSP00000506083.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-246ENST00000681077.11193161aaENSP00000505642.1
 
Nonsense mediated decay
----
VRK1-233ENST00000680384.1118272aaENSP00000506237.1
 
Nonsense mediated decay
----
VRK1-232ENST00000680348.11070170aaENSP00000504922.1
 
Nonsense mediated decay
----
VRK1-228ENST00000680222.1100381aaENSP00000506647.1
 
Nonsense mediated decay
----
VRK1-231ENST00000680339.1947101aaENSP00000506470.1
 
Nonsense mediated decay
----
VRK1-221ENST00000679843.187352aaENSP00000506467.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-211ENST00000679452.178599aaENSP00000505395.1
 
Nonsense mediated decay
----
VRK1-229ENST00000680319.1750No protein-
 
Processed transcript
----
VRK1-205ENST00000555067.211646No protein-
 
Retained intron
---TSL:3
VRK1-213ENST00000679506.13648No protein-
 
Retained intron
----
VRK1-202ENST00000435624.32131No protein-
 
Retained intron
---TSL:5
VRK1-227ENST00000680084.12013No protein-
 
Retained intron
----
VRK1-203ENST00000495064.21829No protein-
 
Retained intron
---TSL:5
VRK1-206ENST00000555351.2968No protein-
 
Retained intron
---TSL:2
VRK1-207ENST00000555402.1415No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 14, Coding exons: 11, Transcript length: 1,869 bps, Translation length: 375 residues

Version

ENST00000681778.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x3046e580)