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Description

COMMD3-BMI1 readthrough [Source:HGNC Symbol;Acc:HGNC:48326]

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
COMMD3-BMI1-205ENST00000602390.51419469aaENSP00000473391.1
 
Protein coding
-R4GMX3 -Ensembl CanonicalGENCODE basicAPPRIS P1TSL:2
COMMD3-BMI1-203ENST00000475460.6508159aaENSP00000473382.1
 
Protein coding
-R4GMW6 -TSL:2CDS 3' incomplete
COMMD3-BMI1-204ENST00000489125.2329110aaENSP00000473495.1
 
Protein coding
-R4GN54 -TSL:2CDS 5' and 3' incomplete
COMMD3-BMI1-201ENST00000417470.174553aaENSP00000398759.2
 
Nonsense mediated decay
-Q5T8Z1 -TSL:5CDS 5' incomplete
COMMD3-BMI1-202ENST00000463409.6605No protein-
 
Processed transcript
---TSL:3
COMMD3-BMI1-206ENST00000602395.1621No protein-
 
Retained intron
---TSL:2
Description

aconitase 2 [Source:HGNC Symbol;Acc:HGNC:118]

Gene Synonyms

ACONM

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ACO2-201ENST00000216254.92734780aaENSP00000216254.4
 
Protein coding
CCDS14017Q99798 NM_001098.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ACO2-210ENST00000676792.13355725aaENSP00000503590.1
 
Protein coding
---GENCODE basic
ACO2-215ENST00000677153.13237747aaENSP00000504453.1
 
Protein coding
---GENCODE basic
ACO2-209ENST00000676748.13170747aaENSP00000503371.1
 
Protein coding
---GENCODE basic
ACO2-219ENST00000677532.13037788aaENSP00000503471.1
 
Protein coding
---GENCODE basic
ACO2-227ENST00000678788.13012775aaENSP00000504684.1
 
Protein coding
---GENCODE basic
ACO2-202ENST00000396512.32811805aaENSP00000379769.3
 
Protein coding
-A2A274 -GENCODE basicTSL:5
ACO2-222ENST00000678269.12811805aaENSP00000504150.1
 
Protein coding
---GENCODE basic
ACO2-220ENST00000677554.12563716aaENSP00000504513.1
 
Protein coding
---GENCODE basic
ACO2-203ENST00000466237.21460422aaENSP00000504719.1
 
Protein coding
---GENCODE basicTSL:3
ACO2-218ENST00000677516.13401324aaENSP00000503370.1
 
Nonsense mediated decay
----
ACO2-221ENST00000677698.1337669aaENSP00000503913.1
 
Nonsense mediated decay
---CDS 5' incomplete
ACO2-228ENST00000678819.1316492aaENSP00000503199.1
 
Nonsense mediated decay
----
ACO2-226ENST00000678688.13130288aaENSP00000503990.1
 
Nonsense mediated decay
----
ACO2-207ENST00000676664.13066160aaENSP00000503709.1
 
Nonsense mediated decay
---CDS 5' incomplete
ACO2-213ENST00000676959.12948487aaENSP00000504377.1
 
Nonsense mediated decay
----
ACO2-208ENST00000676714.1289580aaENSP00000504699.1
 
Nonsense mediated decay
----
ACO2-232ENST00000679320.12819731aaENSP00000504780.1
 
Nonsense mediated decay
----
ACO2-214ENST00000677007.12777324aaENSP00000504634.1
 
Nonsense mediated decay
----
ACO2-211ENST00000676822.13251No protein-
 
Processed transcript
----
ACO2-229ENST00000679264.13978No protein-
 
Retained intron
----
ACO2-217ENST00000677492.13956No protein-
 
Retained intron
----
ACO2-223ENST00000678394.13712No protein-
 
Retained intron
----
ACO2-231ENST00000679311.13244No protein-
 
Retained intron
----
ACO2-225ENST00000678600.13230No protein-
 
Retained intron
----
ACO2-212ENST00000676883.13016No protein-
 
Retained intron
----
ACO2-230ENST00000679284.12890No protein-
 
Retained intron
----
ACO2-224ENST00000678454.12501No protein-
 
Retained intron
----
ACO2-216ENST00000677427.11707No protein-
 
Retained intron
----
ACO2-204ENST00000471094.1699No protein-
 
Retained intron
---TSL:3
ACO2-205ENST00000478010.1644No protein-
 
Retained intron
---TSL:2
ACO2-206ENST00000482208.1624No protein-
 
Retained intron
---TSL:3
Description

N-myc downstream regulated gene 4 [Source:MGI Symbol;Acc:MGI:2384590]

Gene Synonyms

D8Bwg1337e, Ndr1-rs, Ndr4, SMAP-8

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Ndrg4-202ENSMUST00000073139.142966352aaENSMUSP00000072883.8
 
Protein coding
CCDS57634Q8BTG7-1 GENCODE basicAPPRIS ALT1TSL:1
Ndrg4-203ENSMUST00000080666.82738339aaENSMUSP00000079495.8
 
Protein coding
CCDS22565Q8BTG7-2 GENCODE basicAPPRIS P3TSL:1
Ndrg4-201ENSMUST00000041318.143101404aaENSMUSP00000036226.8
 
Protein coding
-Q8BTG7-3 GENCODE basicTSL:1
Ndrg4-207ENSMUST00000160964.81029224aaENSMUSP00000125703.2
 
Protein coding
-E0CZ50 TSL:5CDS 3' incomplete
Ndrg4-209ENSMUST00000162578.8916109aaENSMUSP00000148590.2
 
Protein coding
-A0A1D5RM17 TSL:2CDS 5' incomplete
Ndrg4-211ENSMUST00000212160.2678197aaENSMUSP00000148779.2
 
Protein coding
-A0A1D5RMH3 TSL:5CDS 3' incomplete
Ndrg4-210ENSMUST00000166358.8296381aaENSMUSP00000131203.2
 
Nonsense mediated decay
-E9Q168 TSL:5
Ndrg4-206ENSMUST00000160915.871351aaENSMUSP00000148614.2
 
Nonsense mediated decay
-A0A1D5RM37 TSL:3CDS 5' incomplete
Ndrg4-205ENSMUST00000159851.8820No protein-
 
Retained intron
--TSL:3
Ndrg4-204ENSMUST00000159632.2741No protein-
 
Retained intron
--TSL:3
Ndrg4-208ENSMUST00000161314.2505No protein-
 
Retained intron
--TSL:3
Description

TBC1 domain family member 20 [Source:HGNC Symbol;Acc:HGNC:16133]

Gene Synonyms

C20orf140, dJ852M4.2

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
TBC1D20-201ENST00000354200.54446403aaENSP00000346139.4
 
Protein coding
CCDS13002Q96BZ9-1 NM_144628.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
TBC1D20-227ENST00000681539.13506403aaENSP00000505557.1
 
Protein coding
CCDS13002--GENCODE basicAPPRIS P1
TBC1D20-207ENST00000679895.14531435aaENSP00000505197.1
 
Protein coding
---GENCODE basic
TBC1D20-228ENST00000681551.14355378aaENSP00000504974.1
 
Protein coding
---GENCODE basic
TBC1D20-225ENST00000681414.14336376aaENSP00000505797.1
 
Protein coding
---GENCODE basic
TBC1D20-222ENST00000681129.14234341aaENSP00000505329.1
 
Protein coding
---GENCODE basic
TBC1D20-211ENST00000680050.12479341aaENSP00000505464.1
 
Protein coding
---GENCODE basic
TBC1D20-230ENST00000681742.13394403aaENSP00000506122.1
 
Nonsense mediated decay
CCDS13002---
TBC1D20-214ENST00000680284.12982403aaENSP00000506231.1
 
Nonsense mediated decay
CCDS13002---
TBC1D20-213ENST00000680106.12892403aaENSP00000505500.1
 
Nonsense mediated decay
CCDS13002---
TBC1D20-208ENST00000679944.12846403aaENSP00000506278.1
 
Nonsense mediated decay
CCDS13002---
TBC1D20-229ENST00000681636.12732403aaENSP00000506155.1
 
Nonsense mediated decay
CCDS13002---
TBC1D20-206ENST00000679741.12708403aaENSP00000504904.1
 
Nonsense mediated decay
CCDS13002---
TBC1D20-218ENST00000680792.12223403aaENSP00000506012.1
 
Nonsense mediated decay
CCDS13002---
TBC1D20-203ENST00000461304.52024403aaENSP00000432280.1
 
Nonsense mediated decay
CCDS13002Q96BZ9-1 -TSL:1
TBC1D20-221ENST00000680990.14593126aaENSP00000506050.1
 
Nonsense mediated decay
----
TBC1D20-226ENST00000681441.14483177aaENSP00000504992.1
 
Nonsense mediated decay
----
TBC1D20-231ENST00000681777.14403199aaENSP00000506511.1
 
Nonsense mediated decay
----
TBC1D20-210ENST00000679973.14095379aaENSP00000506502.1
 
Nonsense mediated decay
----
TBC1D20-216ENST00000680515.13132341aaENSP00000506650.1
 
Nonsense mediated decay
----
TBC1D20-220ENST00000680911.12614379aaENSP00000506556.1
 
Nonsense mediated decay
----
TBC1D20-212ENST00000680088.14451No protein-
 
Processed transcript
----
TBC1D20-223ENST00000681193.17493No protein-
 
Retained intron
----
TBC1D20-219ENST00000680815.17261No protein-
 
Retained intron
----
TBC1D20-217ENST00000680521.16715No protein-
 
Retained intron
----
TBC1D20-215ENST00000680491.15792No protein-
 
Retained intron
----
TBC1D20-224ENST00000681389.15633No protein-
 
Retained intron
----
TBC1D20-202ENST00000461188.65541No protein-
 
Retained intron
---TSL:2
TBC1D20-209ENST00000679953.15190No protein-
 
Retained intron
----
TBC1D20-205ENST00000679451.14495No protein-
 
Retained intron
----
TBC1D20-204ENST00000494633.13820No protein-
 
Retained intron
---TSL:2
Description

ATP binding cassette subfamily C member 13 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:16022]

Gene Synonyms

ABCC13P, C21orf73, PRED6

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ABCC13-206ENST00000482980.53364No protein-
 
Processed transcript
--TSL:1
ABCC13-204ENST00000471902.5689No protein-
 
Processed transcript
--TSL:1
ABCC13-201ENST00000429114.5611No protein-
 
Processed transcript
--GENCODE basicTSL:3
ABCC13-205ENST00000481582.54080No protein-
 
Retained intron
--TSL:1
ABCC13-203ENST00000467409.52747No protein-
 
Retained intron
--TSL:1
ABCC13-202ENST00000463099.13842No protein-
 
Transcribed unprocessed pseudogene
--Ensembl CanonicalGENCODE basicTSL:NA
Description

O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]

Gene Synonyms

copy I, fm81g08, ogt, ogta, wu:fc12b01, wu:fm81g08

Location
NameTranscript IDbpProteinTranslation IDBiotypeUniProt MatchFlags
ogt.1-216ENSDART00000190938.180471119aaENSDARP00000145336.1
 
Protein coding
A0A2R8PZ91 -
ogt.1-215ENSDART00000183755.179991103aaENSDARP00000154706.1
 
Protein coding
A0A2R8QNQ9 -
ogt.1-210ENSDART00000163199.268321046aaENSDARP00000131176.1
 
Protein coding
B3DKP3 APPRIS P5
ogt.1-212ENSDART00000170623.241951036aaENSDARP00000141417.1
 
Protein coding
A0A0R4IYQ8 APPRIS ALT1
ogt.1-208ENSDART00000159101.231891062aaENSDARP00000137847.1
 
Protein coding
A0A0R4ISG3 -
ogt.1-213ENSDART00000171285.231591052aaENSDARP00000136328.1
 
Protein coding
A0A0R4IP04 -
ogt.1-207ENSDART00000158629.249863aaENSDARP00000134118.1
 
Protein coding
A0A0R4IEZ5 CDS 3' incomplete
ogt.1-214ENSDART00000171581.243136aaENSDARP00000134305.1
 
Protein coding
A0A0R4IJA3 CDS 3' incomplete
ogt.1-209ENSDART00000161569.21013No protein-
 
Retained intron
--
ogt.1-206ENSDART00000158615.2967No protein-
 
Retained intron
--
ogt.1-211ENSDART00000167221.2744No protein-
 
Retained intron
--
Description

aconitase 2 [Source:HGNC Symbol;Acc:HGNC:118]

Gene Synonyms

ACONM

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ACO2-201ENST00000216254.92734780aaENSP00000216254.4
 
Protein coding
CCDS14017Q99798 NM_001098.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ACO2-210ENST00000676792.13355725aaENSP00000503590.1
 
Protein coding
---GENCODE basic
ACO2-215ENST00000677153.13237747aaENSP00000504453.1
 
Protein coding
---GENCODE basic
ACO2-209ENST00000676748.13170747aaENSP00000503371.1
 
Protein coding
---GENCODE basic
ACO2-219ENST00000677532.13037788aaENSP00000503471.1
 
Protein coding
---GENCODE basic
ACO2-227ENST00000678788.13012775aaENSP00000504684.1
 
Protein coding
---GENCODE basic
ACO2-202ENST00000396512.32811805aaENSP00000379769.3
 
Protein coding
-A2A274 -GENCODE basicTSL:5
ACO2-222ENST00000678269.12811805aaENSP00000504150.1
 
Protein coding
---GENCODE basic
ACO2-220ENST00000677554.12563716aaENSP00000504513.1
 
Protein coding
---GENCODE basic
ACO2-203ENST00000466237.21460422aaENSP00000504719.1
 
Protein coding
---GENCODE basicTSL:3
ACO2-218ENST00000677516.13401324aaENSP00000503370.1
 
Nonsense mediated decay
----
ACO2-221ENST00000677698.1337669aaENSP00000503913.1
 
Nonsense mediated decay
---CDS 5' incomplete
ACO2-228ENST00000678819.1316492aaENSP00000503199.1
 
Nonsense mediated decay
----
ACO2-226ENST00000678688.13130288aaENSP00000503990.1
 
Nonsense mediated decay
----
ACO2-207ENST00000676664.13066160aaENSP00000503709.1
 
Nonsense mediated decay
---CDS 5' incomplete
ACO2-213ENST00000676959.12948487aaENSP00000504377.1
 
Nonsense mediated decay
----
ACO2-208ENST00000676714.1289580aaENSP00000504699.1
 
Nonsense mediated decay
----
ACO2-232ENST00000679320.12819731aaENSP00000504780.1
 
Nonsense mediated decay
----
ACO2-214ENST00000677007.12777324aaENSP00000504634.1
 
Nonsense mediated decay
----
ACO2-211ENST00000676822.13251No protein-
 
Processed transcript
----
ACO2-229ENST00000679264.13978No protein-
 
Retained intron
----
ACO2-217ENST00000677492.13956No protein-
 
Retained intron
----
ACO2-223ENST00000678394.13712No protein-
 
Retained intron
----
ACO2-231ENST00000679311.13244No protein-
 
Retained intron
----
ACO2-225ENST00000678600.13230No protein-
 
Retained intron
----
ACO2-212ENST00000676883.13016No protein-
 
Retained intron
----
ACO2-230ENST00000679284.12890No protein-
 
Retained intron
----
ACO2-224ENST00000678454.12501No protein-
 
Retained intron
----
ACO2-216ENST00000677427.11707No protein-
 
Retained intron
----
ACO2-204ENST00000471094.1699No protein-
 
Retained intron
---TSL:3
ACO2-205ENST00000478010.1644No protein-
 
Retained intron
---TSL:2
ACO2-206ENST00000482208.1624No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,170 bps, Translation length: 747 residues

Version

ENST00000676748.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x249bed58)