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Description

potassium voltage-gated channel interacting protein 4 [Source:NCBI gene;Acc:111928151]

NameTranscript IDbpProteinTranslation IDBiotypeFlags
-ENSCCET00000038585.11484267aaENSCCEP00000025848.1
 
Protein coding
-
-ENSCCET00000038586.11382233aaENSCCEP00000025849.1
 
Protein coding
-
-ENSCCET00000038584.1911229aaENSCCEP00000025847.1
 
Protein coding
-
Description

sterile alpha motif domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28706]

Location
NameTranscript IDbpProteinTranslation IDBiotypeFlags
SAMD11-201ENSBMST00010000125.12022673aaENSBMSP00010000111.1
 
Protein coding
-
SAMD11-202ENSBMST00010000128.11872623aaENSBMSP00010000114.1
 
Protein coding
-
SAMD11-203ENSBMST00010000131.11815604aaENSBMSP00010000117.1
 
Protein coding
-
Description

sodium channel protein type 2 subunit alpha-like [Source:NCBI gene;Acc:113482220]

NameTranscript IDbpProteinTranslation IDBiotypeFlags
-ENSACUT00000015686.169222012aaENSACUP00000014696.1
 
Protein coding
-
-ENSACUT00000015688.169222012aaENSACUP00000014698.1
 
Protein coding
-
-ENSACUT00000015692.168321982aaENSACUP00000014702.1
 
Protein coding
-
-ENSACUT00000015695.167871967aaENSACUP00000014705.1
 
Protein coding
-
-ENSACUT00000015698.167661960aaENSACUP00000014708.1
 
Protein coding
-
-ENSACUT00000015700.167211945aaENSACUP00000014710.1
 
Protein coding
-
-ENSACUT00000015703.166581924aaENSACUP00000014713.1
 
Protein coding
-
-ENSACUT00000015704.162621792aaENSACUP00000014714.1
 
Protein coding
-
-ENSACUT00000015705.162351783aaENSACUP00000014715.1
 
Protein coding
-
Description

KIT proto-oncogene, receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6342]

Gene Synonyms

C-Kit, CD117, PBT, SCFR

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
KIT-201ENST00000288135.65147976aaENSP00000288135.6
 
Protein coding
CCDS3496P10721-1 NM_000222.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
KIT-202ENST00000412167.63470972aaENSP00000390987.2
 
Protein coding
CCDS47058P10721-2 -APPRIS ALT1TSL:1
KIT-203ENST00000512959.1746No protein-
 
Retained intron
---TSL:4
KIT-204ENST00000514582.1538No protein-
 
Retained intron
---TSL:2
Description

protein phosphatase 2 regulatory subunit Balpha [Source:VGNC Symbol;Acc:VGNC:69011]

Location
NameTranscript IDbpProteinTranslation IDBiotypeUniProt MatchFlags
PPP2R2A-202ENSFCAT00000030432.42333452aaENSFCAP00000021203.2
 
Protein coding
M3X3K3 -
PPP2R2A-203ENSFCAT00000033245.32084447aaENSFCAP00000036593.1
 
Protein coding
A0A2I2UVM7 -
PPP2R2A-201ENSFCAT00000060154.11374457aaENSFCAP00000051047.1
 
Protein coding
A0A337STR8 -
Description

glutamate receptor 2-like [Source:NCBI gene;Acc:115014292]

NameTranscript IDbpProteinTranslation IDBiotypeFlags
gria2a-201ENSCGOT00000047516.16730906aaENSCGOP00000044487.1
 
Protein coding
-
gria2a-202ENSCGOT00000047532.16554894aaENSCGOP00000044503.1
 
Protein coding
-
gria2a-205ENSCGOT00000048036.12724907aaENSCGOP00000044967.1
 
Protein coding
-
gria2a-207ENSCGOT00000048092.12682893aaENSCGOP00000045019.1
 
Protein coding
-
gria2a-209ENSCGOT00000048259.12628875aaENSCGOP00000045176.1
 
Protein coding
-
gria2a-203ENSCGOT00000047880.12565854aaENSCGOP00000044838.1
 
Protein coding
-
gria2a-204ENSCGOT00000047899.12553850aaENSCGOP00000044855.1
 
Protein coding
-
gria2a-206ENSCGOT00000048089.12550849aaENSCGOP00000045017.1
 
Protein coding
-
gria2a-210ENSCGOT00000048290.12532843aaENSCGOP00000045207.1
 
Protein coding
-
gria2a-208ENSCGOT00000048254.12514837aaENSCGOP00000045171.1
 
Protein coding
-
Description

glutamate receptor 2-like [Source:NCBI gene;Acc:115014292]

NameTranscript IDbpProteinTranslation IDBiotypeFlags
gria2a-201ENSCGOT00000047516.16730906aaENSCGOP00000044487.1
 
Protein coding
-
gria2a-202ENSCGOT00000047532.16554894aaENSCGOP00000044503.1
 
Protein coding
-
gria2a-205ENSCGOT00000048036.12724907aaENSCGOP00000044967.1
 
Protein coding
-
gria2a-207ENSCGOT00000048092.12682893aaENSCGOP00000045019.1
 
Protein coding
-
gria2a-209ENSCGOT00000048259.12628875aaENSCGOP00000045176.1
 
Protein coding
-
gria2a-203ENSCGOT00000047880.12565854aaENSCGOP00000044838.1
 
Protein coding
-
gria2a-204ENSCGOT00000047899.12553850aaENSCGOP00000044855.1
 
Protein coding
-
gria2a-206ENSCGOT00000048089.12550849aaENSCGOP00000045017.1
 
Protein coding
-
gria2a-210ENSCGOT00000048290.12532843aaENSCGOP00000045207.1
 
Protein coding
-
gria2a-208ENSCGOT00000048254.12514837aaENSCGOP00000045171.1
 
Protein coding
-
Description

glutamate receptor 2-like [Source:NCBI gene;Acc:115014292]

NameTranscript IDbpProteinTranslation IDBiotypeFlags
gria2a-201ENSCGOT00000047516.16730906aaENSCGOP00000044487.1
 
Protein coding
-
gria2a-202ENSCGOT00000047532.16554894aaENSCGOP00000044503.1
 
Protein coding
-
gria2a-205ENSCGOT00000048036.12724907aaENSCGOP00000044967.1
 
Protein coding
-
gria2a-207ENSCGOT00000048092.12682893aaENSCGOP00000045019.1
 
Protein coding
-
gria2a-209ENSCGOT00000048259.12628875aaENSCGOP00000045176.1
 
Protein coding
-
gria2a-203ENSCGOT00000047880.12565854aaENSCGOP00000044838.1
 
Protein coding
-
gria2a-204ENSCGOT00000047899.12553850aaENSCGOP00000044855.1
 
Protein coding
-
gria2a-206ENSCGOT00000048089.12550849aaENSCGOP00000045017.1
 
Protein coding
-
gria2a-210ENSCGOT00000048290.12532843aaENSCGOP00000045207.1
 
Protein coding
-
gria2a-208ENSCGOT00000048254.12514837aaENSCGOP00000045171.1
 
Protein coding
-
Description

F-box protein 42 [Source:NCBI gene;Acc:100751392]

Location
NameTranscript IDbpProteinTranslation IDBiotypeFlags
Fbxo42-201ENSCGRT00001024319.16238717aaENSCGRP00001020075.1
 
Protein coding
-
Description

glutathione S-transferase Y1 [Source:NCBI gene;Acc:100766772]

Location
NameTranscript IDbpProteinTranslation IDBiotypeUniProt MatchFlags
-ENSCGRT00000000593.12515218aaENSCGRP00000000558.1
 
Protein coding
--
-ENSCGRT00000000589.12462218aaENSCGRP00000000554.1
 
Protein coding
--
-ENSCGRT00000000598.11804218aaENSCGRP00000000563.1
 
Protein coding
--
-ENSCGRT00000000594.11698218aaENSCGRP00000000559.1
 
Protein coding
--
-ENSCGRT00000000590.11666218aaENSCGRP00000000555.1
 
Protein coding
--
-ENSCGRT00000000591.11666218aaENSCGRP00000000556.1
 
Protein coding
--
-ENSCGRT00000000597.11112218aaENSCGRP00000000562.1
 
Protein coding
A0A3L7ICL5 -
-ENSCGRT00000000596.11103218aaENSCGRP00000000561.1
 
Protein coding
A0A3L7ICJ5 -
-ENSCGRT00000000595.1744247aaENSCGRP00000000560.1
 
Protein coding
--
-ENSCGRT00000000592.1657218aaENSCGRP00000000557.1
 
Protein coding
--
Description

calpain 3 [Source:HGNC Symbol;Acc:HGNC:1480]

Gene Synonyms

CANP3, LGMD2, LGMD2A, nCL-1, p94

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
CAPN3-206ENST00000397163.83315821aaENSP00000380349.3
 
Protein coding
CCDS45245P20807-1 NM_000070.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
CAPN3-256ENST00000674139.14597156aaENSP00000501054.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-205ENST00000357568.83130815aaENSP00000350181.3
 
Protein coding
CCDS32207P20807-3 -GENCODE basicTSL:1
CAPN3-203ENST00000349748.83045729aaENSP00000183936.4
 
Protein coding
CCDS10085P20807-2 -GENCODE basicTSL:1
CAPN3-236ENST00000673886.12078156aaENSP00000501155.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-252ENST00000674093.11984156aaENSP00000501303.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-258ENST00000674146.11733156aaENSP00000501175.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-259ENST00000674149.11707156aaENSP00000501112.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-247ENST00000674018.11691156aaENSP00000501271.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-234ENST00000673851.11688156aaENSP00000501142.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-207ENST00000397200.81643309aaENSP00000380384.4
 
Protein coding
CCDS45246P20807-4 -GENCODE basicTSL:1
CAPN3-239ENST00000673928.11437156aaENSP00000501099.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-230ENST00000673771.11418156aaENSP00000501023.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-237ENST00000673890.11416156aaENSP00000501293.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-240ENST00000673936.11317156aaENSP00000501189.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-202ENST00000337571.91304156aaENSP00000336840.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:1
CAPN3-204ENST00000356316.71291156aaENSP00000348667.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:5
CAPN3-208ENST00000397204.91263156aaENSP00000380387.4
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:1
CAPN3-253ENST00000674119.11170156aaENSP00000501217.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-219ENST00000569136.61148156aaENSP00000455254.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basicTSL:2
CAPN3-226ENST00000673692.1861156aaENSP00000501138.1
 
Protein coding
CCDS10086P20807-5 -GENCODE basic
CAPN3-229ENST00000673750.14195191aaENSP00000501173.1
 
Protein coding
-H3BS77 -GENCODE basic
CAPN3-201ENST00000318023.113172773aaENSP00000326281.8
 
Protein coding
-F8W8F5 -GENCODE basicAPPRIS ALT2TSL:5
CAPN3-250ENST00000674052.12354229aaENSP00000501057.1
 
Protein coding
-A0A669KB08 -GENCODE basic
CAPN3-243ENST00000673978.11623202aaENSP00000500976.1
 
Protein coding
-A0A669KAB9 -GENCODE basic
CAPN3-228ENST00000673743.11526122aaENSP00000500989.1
 
Protein coding
-A0A669KAX6 -GENCODE basic
CAPN3-210ENST00000561817.5915191aaENSP00000456575.1
 
Protein coding
-H3BS77 -GENCODE basicTSL:1
CAPN3-220ENST00000569827.5908255aaENSP00000454379.1
 
Protein coding
-H3BMH1 -TSL:5CDS 3' incomplete
CAPN3-233ENST00000673839.1897144aaENSP00000501188.1
 
Protein coding
-A0A669KB98 -CDS 3' incomplete
CAPN3-255ENST00000674135.1801201aaENSP00000501178.1
 
Protein coding
-A0A669KBA3 -CDS 3' incomplete
CAPN3-249ENST00000674041.1725184aaENSP00000500956.1
 
Protein coding
-A0A669KAU6 -CDS 3' incomplete
CAPN3-215ENST00000565559.5711157aaENSP00000457878.1
 
Protein coding
-H3BUZ3 -TSL:3CDS 3' incomplete
CAPN3-212ENST00000564503.5593169aaENSP00000457898.1
 
Protein coding
-H3BV08 -TSL:5CDS 5' incomplete
CAPN3-216ENST00000567071.5563188aaENSP00000456607.1
 
Protein coding
-H3BSA2 -TSL:4CDS 5' and 3' incomplete
CAPN3-227ENST00000673705.1223984aaENSP00000501021.1
 
Nonsense mediated decay
-A0A669KB02 -CDS 5' incomplete
CAPN3-244ENST00000673987.1135099aaENSP00000501231.1
 
Nonsense mediated decay
-A0A669KBE1 --
CAPN3-245ENST00000674011.1134899aaENSP00000501171.1
 
Nonsense mediated decay
-A0A669KBE1 --
CAPN3-241ENST00000673939.1128899aaENSP00000501129.1
 
Nonsense mediated decay
-A0A669KBE1 --
CAPN3-222ENST00000673646.1102783aaENSP00000501007.1
 
Nonsense mediated decay
-A0A0S2Z3E6 --
CAPN3-218ENST00000568153.2769110aaENSP00000454937.2
 
Nonsense mediated decay
-H3BNN7 -TSL:5CDS 5' incomplete
CAPN3-214ENST00000565274.5734110aaENSP00000457759.1
 
Nonsense mediated decay
-H3BUR3 -TSL:5CDS 5' incomplete
CAPN3-217ENST00000567817.671884aaENSP00000456514.2
 
Nonsense mediated decay
-H3BS30 -TSL:5CDS 5' incomplete
CAPN3-211ENST00000562199.2469109aaENSP00000501034.1
 
Nonsense mediated decay
-A0A669KB11 -TSL:5CDS 5' incomplete
CAPN3-238ENST00000673893.141143aaENSP00000500987.1
 
Nonsense mediated decay
-A0A669KAU4 -CDS 5' incomplete
CAPN3-221ENST00000638141.22745No protein-
 
Processed transcript
---TSL:5
CAPN3-257ENST00000674140.11577No protein-
 
Processed transcript
----
CAPN3-223ENST00000673658.11166No protein-
 
Processed transcript
----
CAPN3-242ENST00000673950.1913No protein-
 
Processed transcript
----
CAPN3-213ENST00000565173.2879No protein-
 
Processed transcript
---TSL:4
CAPN3-246ENST00000674012.1796No protein-
 
Processed transcript
----
CAPN3-251ENST00000674064.1794No protein-
 
Processed transcript
----
CAPN3-235ENST00000673854.16433No protein-
 
Retained intron
----
CAPN3-231ENST00000673774.11724No protein-
 
Retained intron
----
CAPN3-209ENST00000466222.71366No protein-
 
Retained intron
---TSL:2
CAPN3-232ENST00000673813.11102No protein-
 
Retained intron
----
CAPN3-225ENST00000673687.11071No protein-
 
Retained intron
----
CAPN3-248ENST00000674027.1799No protein-
 
Retained intron
----
CAPN3-254ENST00000674130.1705No protein-
 
Retained intron
----
CAPN3-224ENST00000673684.1521No protein-
 
Retained intron
----
Statistics

Exons: 6, Coding exons: 5, Transcript length: 769 bps, Translation length: 110 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENST00000568153.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x3054a840)