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Description

recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]

Gene Synonyms

CBF1, IGKJRB, IGKJRB1, KBF2, RBP-J, RBPJK, RBPSUH, SUH

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000355476.8RBPJ-2055395487aaENSP00000347659.4
 
Protein coding
CCDS43219Q06330-6 NM_015874.6MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000342320.8RBPJ-2025761486aaENSP00000340124.4
 
Protein coding
CCDS33969Q06330-6 -GENCODE basicAPPRIS P3TSL:1
ENST00000681484.1RBPJ-2442169465aaENSP00000505636.1
 
Protein coding
CCDS87214--GENCODE basic
ENST00000505958.6RBPJ-2112136486aaENSP00000426872.2
 
Protein coding
CCDS33969D6RE93 -GENCODE basicAPPRIS P3TSL:5
ENST00000681093.1RBPJ-2402100486aaENSP00000504964.1
 
Protein coding
CCDS33969--GENCODE basicAPPRIS P3
ENST00000348160.9RBPJ-2041998486aaENSP00000339699.5
 
Protein coding
CCDS33969Q06330-7 -GENCODE basicAPPRIS P3TSL:1
ENST00000342295.6RBPJ-2011992500aaENSP00000345206.1
 
Protein coding
CCDS3437Q06330-1 -GENCODE basicTSL:5
ENST00000680928.1RBPJ-2381850486aaENSP00000505493.1
 
Protein coding
CCDS33969--GENCODE basicAPPRIS P3
ENST00000512671.6RBPJ-2231843500aaENSP00000423644.2
 
Protein coding
CCDS3437D6R946 -GENCODE basicTSL:2
ENST00000361572.10RBPJ-2061697500aaENSP00000354528.6
 
Protein coding
CCDS3437Q06330-1 -GENCODE basicTSL:1
ENST00000507561.5RBPJ-2141689465aaENSP00000423907.1
 
Protein coding
CCDS87214Q06330-5 -GENCODE basicTSL:1
ENST00000345843.8RBPJ-2031682465aaENSP00000305815.6
 
Protein coding
CCDS87214Q06330-4 -GENCODE basicTSL:1
ENST00000681264.1RBPJ-2421675465aaENSP00000505255.1
 
Protein coding
CCDS87214--GENCODE basic
ENST00000504423.2RBPJ-2071621465aaENSP00000421804.2
 
Protein coding
CCDS87214H0Y8R3 -GENCODE basicTSL:5
ENST00000680511.1RBPJ-2372106434aaENSP00000506628.1
 
Protein coding
---CDS 3' incomplete
ENST00000681260.1RBPJ-2411737463aaENSP00000505479.1
 
Protein coding
---CDS 3' incomplete
ENST00000681856.1RBPJ-2481706457aaENSP00000505922.1
 
Protein coding
---CDS 3' incomplete
ENST00000680140.1RBPJ-2341685440aaENSP00000506443.1
 
Protein coding
---GENCODE basic
ENST00000504907.5RBPJ-2081682382aaENSP00000423703.1
 
Protein coding
-D6R927 -GENCODE basicTSL:5
ENST00000509158.6RBPJ-2161678434aaENSP00000424804.2
 
Protein coding
-D6RF98 -GENCODE basicTSL:2
ENST00000504938.1RBPJ-209731143aaENSP00000424459.1
 
Protein coding
-D6RB37 -TSL:3CDS 3' incomplete
ENST00000515573.5RBPJ-231698189aaENSP00000423406.1
 
Protein coding
-D6RA45 -TSL:5CDS 3' incomplete
ENST00000512351.5RBPJ-22260994aaENSP00000424789.1
 
Protein coding
-D6RAT2 -TSL:4CDS 3' incomplete
ENST00000507574.5RBPJ-215607157aaENSP00000422617.1
 
Protein coding
-D6RBQ8 -TSL:5CDS 3' incomplete
ENST00000514675.5RBPJ-227578110aaENSP00000423575.1
 
Protein coding
-D6R9K5 -TSL:5CDS 3' incomplete
ENST00000511546.5RBPJ-221572107aaENSP00000422838.1
 
Protein coding
-D6R9X3 -TSL:5CDS 3' incomplete
ENST00000514730.5RBPJ-228569113aaENSP00000425061.1
 
Protein coding
-D6REC2 -TSL:5CDS 3' incomplete
ENST00000506956.5RBPJ-21356697aaENSP00000425750.1
 
Protein coding
-D6RIZ8 -TSL:4CDS 3' incomplete
ENST00000514807.5RBPJ-22934048aaENSP00000424989.1
 
Protein coding
-D6REP3 -TSL:3CDS 3' incomplete
ENST00000681506.1RBPJ-245188960aaENSP00000504925.1
 
Nonsense mediated decay
----
ENST00000679698.1RBPJ-233187860aaENSP00000506331.1
 
Nonsense mediated decay
----
ENST00000681679.1RBPJ-2461766184aaENSP00000505870.1
 
Nonsense mediated decay
----
ENST00000679469.1RBPJ-2321657105aaENSP00000504953.1
 
Nonsense mediated decay
----
ENST00000681025.1RBPJ-239163759aaENSP00000504979.1
 
Nonsense mediated decay
----
ENST00000681799.1RBPJ-247153458aaENSP00000504876.1
 
Nonsense mediated decay
----
ENST00000680204.1RBPJ-235130752aaENSP00000506010.1
 
Nonsense mediated decay
----
ENST00000510778.7RBPJ-2181198185aaENSP00000427170.3
 
Nonsense mediated decay
-D6RCM1 -TSL:5
ENST00000680210.1RBPJ-236119161aaENSP00000505411.1
 
Nonsense mediated decay
----
ENST00000513182.5RBPJ-22453753aaENSP00000427344.1
 
Nonsense mediated decay
-D6RIV8 -TSL:4
ENST00000515023.6RBPJ-2301476No protein-
 
Processed transcript
---TSL:5
ENST00000511401.5RBPJ-219577No protein-
 
Processed transcript
---TSL:5
ENST00000514656.3RBPJ-226455No protein-
 
Processed transcript
---TSL:2
ENST00000689192.1RBPJ-2495297No protein-
 
Retained intron
----
ENST00000691085.1RBPJ-2505281No protein-
 
Retained intron
----
ENST00000692303.1RBPJ-2513067No protein-
 
Retained intron
----
ENST00000681403.1RBPJ-2431671No protein-
 
Retained intron
----
ENST00000514380.5RBPJ-2251519No protein-
 
Retained intron
---TSL:2
ENST00000505727.1RBPJ-210860No protein-
 
Retained intron
---TSL:2
ENST00000511451.5RBPJ-220742No protein-
 
Retained intron
---TSL:2
ENST00000506903.1RBPJ-212658No protein-
 
Retained intron
---TSL:3
ENST00000510725.1RBPJ-217546No protein-
 
Retained intron
---TSL:2
Description

ring finger protein 123 [Source:MGI Symbol;Acc:MGI:2148796]

Gene Synonyms

KPC1

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000162355.8Rnf123-21447271320aaENSMUSP00000125745.2
 
Protein coding
CCDS81072Q5XPI3-2 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000160249.8Rnf123-20744261314aaENSMUSP00000124548.2
 
Protein coding
CCDS52922Q5XPI3-1 GENCODE basicAPPRIS P3TSL:5
ENSMUST00000178267.8Rnf123-21843091314aaENSMUSP00000136953.2
 
Protein coding
CCDS52922Q5XPI3-1 GENCODE basicAPPRIS P3TSL:5
ENSMUST00000047746.13Rnf123-20147221320aaENSMUSP00000040803.7
 
Protein coding
-Q5XPI3-2 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000160649.8Rnf123-20839191239aaENSMUSP00000125495.2
 
Protein coding
-Q05CH9 TSL:1CDS 3' incomplete
ENSMUST00000161828.8Rnf123-211799111aaENSMUSP00000125213.2
 
Protein coding
-E0CXL3 TSL:2CDS 3' incomplete
ENSMUST00000159372.3Rnf123-20436927aaENSMUSP00000123933.2
 
Protein coding
-E0CYS5 TSL:2CDS 3' incomplete
ENSMUST00000162516.3Rnf123-21536559aaENSMUSP00000124986.2
 
Protein coding
-E0CX26 TSL:5CDS 3' incomplete
ENSMUST00000174504.8Rnf123-21734791aaENSMUSP00000134087.2
 
Protein coding
-G3UYH5 TSL:5CDS 3' incomplete
ENSMUST00000159306.8Rnf123-2031137261aaENSMUSP00000125695.2
 
Nonsense mediated decay
-F7B5Z3 TSL:1CDS 5' incomplete
ENSMUST00000162753.8Rnf123-21671961aaENSMUSP00000124824.2
 
Nonsense mediated decay
-F6U715 TSL:3CDS 5' incomplete
ENSMUST00000162152.2Rnf123-213332No protein-
 
Processed transcript
--TSL:5
ENSMUST00000161673.8Rnf123-2104658No protein-
 
Retained intron
--TSL:2
ENSMUST00000159136.8Rnf123-2023789No protein-
 
Retained intron
--TSL:1
ENSMUST00000160841.2Rnf123-209745No protein-
 
Retained intron
--TSL:2
ENSMUST00000162123.2Rnf123-212545No protein-
 
Retained intron
--TSL:2
ENSMUST00000159523.2Rnf123-205445No protein-
 
Retained intron
--TSL:2
ENSMUST00000159526.2Rnf123-206322No protein-
 
Retained intron
--TSL:2
Description

ral guanine nucleotide dissociation stimulator like 4 [Source:HGNC Symbol;Acc:HGNC:31911]

Gene Synonyms

Rgr

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000290691.10RGL4-2012725473aaENSP00000290691.5
 
Protein coding
CCDS13811Q8IZJ4-1 NM_153615.2MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000615003.4RGL4-2103014410aaENSP00000480308.1
 
Protein coding
-A0A087WWL2 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000612432.4RGL4-2092649356aaENSP00000484573.1
 
Protein coding
-A0A087X1Z6 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000401461.5RGL4-2022420337aaENSP00000383951.1
 
Protein coding
-B5MCW5 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000423392.5RGL4-2032333536aaENSP00000402142.1
 
Protein coding
-E7EPT8 -TSL:1CDS 3' incomplete
ENST00000452208.1RGL4-205759155aaENSP00000393115.1
 
Protein coding
-H7C063 -TSL:2CDS 5' incomplete
ENST00000441897.5RGL4-2043779435aaENSP00000396252.1
 
Nonsense mediated decay
-E9PH21 -TSL:2
ENST00000460167.1RGL4-207394No protein-
 
Processed transcript
---TSL:2
ENST00000467354.2RGL4-2082699No protein-
 
Retained intron
---TSL:1
ENST00000460003.4RGL4-2062656No protein-
 
Retained intron
---TSL:1
Description

ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]

Gene Synonyms

KIAA0646

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000373479.9RNF8-2025616485aaENSP00000362578.4
 
Protein coding
CCDS4834O76064-1 NM_003958.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000469731.5RNF8-2041800448aaENSP00000418879.1
 
Protein coding
CCDS4833O76064-3 -GENCODE basicTSL:5
ENST00000498460.1RNF8-208835208aaENSP00000417599.1
 
Protein coding
-H7C4L7 -TSL:3CDS 5' incomplete
ENST00000487950.1RNF8-206731205aaENSP00000417736.1
 
Protein coding
-C9J858 -TSL:4CDS 3' incomplete
ENST00000229866.10RNF8-201212498aaENSP00000229866.6
 
Nonsense mediated decay
-O76064-2 -TSL:2
ENST00000494320.5RNF8-20797749aaENSP00000420268.1
 
Nonsense mediated decay
-F8WDH8 -TSL:5
ENST00000469316.5RNF8-20360889aaENSP00000419859.1
 
Nonsense mediated decay
-F8WEW6 -TSL:4
ENST00000479516.1RNF8-2051525No protein-
 
Processed transcript
---TSL:1
Description

heterogeneous nuclear ribonucleoprotein C [Source:HGNC Symbol;Acc:HGNC:5035]

Gene Synonyms

HNRPC

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000553300.6HNRNPC-2043165293aaENSP00000450544.1
 
Protein coding
CCDS45079P07910-2 NM_004500.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000430246.6HNRNPC-2034501293aaENSP00000442816.1
 
Protein coding
CCDS45079P07910-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000554969.5HNRNPC-2131924293aaENSP00000450725.1
 
Protein coding
CCDS45079P07910-2 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000554455.5HNRNPC-2101784306aaENSP00000451291.1
 
Protein coding
CCDS41915P07910-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000420743.6HNRNPC-2021559306aaENSP00000404848.2
 
Protein coding
CCDS41915P07910-1 -GENCODE basicAPPRIS P3TSL:2
ENST00000557201.5HNRNPC-2291371306aaENSP00000452276.1
 
Protein coding
CCDS41915P07910-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000556897.5HNRNPC-2261252293aaENSP00000451176.1
 
Protein coding
CCDS45079P07910-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000336053.10HNRNPC-2013301288aaENSP00000338095.6
 
Protein coding
-B4DY08 -GENCODE basicTSL:2
ENST00000553753.5HNRNPC-2071790288aaENSP00000450548.1
 
Protein coding
-B4DY08 -GENCODE basicTSL:5
ENST00000555309.5HNRNPC-2181714305aaENSP00000450790.1
 
Protein coding
-G3V2Q1 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000555914.5HNRNPC-2211658292aaENSP00000451708.1
 
Protein coding
-G3V4C1 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000556142.5HNRNPC-2221599231aaENSP00000451187.1
 
Protein coding
-G3V576 -GENCODE basicTSL:5
ENST00000556513.5HNRNPC-2241403231aaENSP00000452214.1
 
Protein coding
-G3V576 -GENCODE basicTSL:5
ENST00000555883.5HNRNPC-2201182250aaENSP00000450629.1
 
Protein coding
-P07910-4 -GENCODE basicTSL:1
ENST00000556628.5HNRNPC-2251156226aaENSP00000451652.1
 
Protein coding
-P07910-3 -GENCODE basicTSL:1
ENST00000554383.5HNRNPC-2081039262aaENSP00000452021.1
 
Protein coding
-G3V4W0 -TSL:5CDS 3' incomplete
ENST00000555137.5HNRNPC-215789175aaENSP00000452185.1
 
Protein coding
-G3V555 -TSL:3CDS 3' incomplete
ENST00000555215.5HNRNPC-217781187aaENSP00000452213.1
 
Protein coding
-G3V575 -TSL:5CDS 3' incomplete
ENST00000554539.5HNRNPC-211748180aaENSP00000452545.1
 
Protein coding
-G3V5V7 -TSL:5CDS 3' incomplete
ENST00000557157.5HNRNPC-228698214aaENSP00000450601.1
 
Protein coding
-G3V2D6 -TSL:5CDS 3' incomplete
ENST00000554891.5HNRNPC-212644126aaENSP00000450467.1
 
Protein coding
-G3V251 -TSL:5CDS 3' incomplete
ENST00000556226.5HNRNPC-223629121aaENSP00000451292.1
 
Protein coding
-G3V3K6 -TSL:5CDS 3' incomplete
ENST00000557768.1HNRNPC-23259954aaENSP00000450669.1
 
Protein coding
-G3V2H6 -TSL:3CDS 3' incomplete
ENST00000557336.1HNRNPC-23058066aaENSP00000451892.1
 
Protein coding
-G3V4M8 -TSL:3CDS 3' incomplete
ENST00000555176.5HNRNPC-216531117aaENSP00000452573.1
 
Protein coding
-G3V5X6 -TSL:5CDS 3' incomplete
ENST00000557442.5HNRNPC-2311308147aaENSP00000452599.1
 
Nonsense mediated decay
-B4DSU6 -TSL:2
ENST00000555127.1HNRNPC-214929No protein-
 
Retained intron
---TSL:2
ENST00000557033.1HNRNPC-227760No protein-
 
Retained intron
---TSL:3
ENST00000553444.1HNRNPC-205724No protein-
 
Retained intron
---TSL:2
ENST00000554417.1HNRNPC-209691No protein-
 
Retained intron
---TSL:2
ENST00000555585.5HNRNPC-219682No protein-
 
Retained intron
---TSL:2
ENST00000553614.5HNRNPC-206604No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,714 bps, Translation length: 305 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000555309.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x339f3170)