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EnsemblEnsembl Home
Description

nuclear paraspeckle assembly transcript 1 [Source:HGNC Symbol;Acc:HGNC:30815]

Gene Synonyms

LINC00084, MENepsilon/beta, NCRNA00084, TncRNA, VINC

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000501122.2NEAT1-20222743No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:NA
ENST00000687132.1NEAT1-2113736No protein-
 
lncRNA
---
ENST00000685861.1NEAT1-2103732No protein-
 
lncRNA
---
ENST00000601801.3NEAT1-2033524No protein-
 
lncRNA
--GENCODE basicTSL:4
ENST00000499732.3NEAT1-2013441No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000670617.1NEAT1-2093301No protein-
 
lncRNA
---
ENST00000645023.1NEAT1-2073300No protein-
 
lncRNA
--GENCODE basic
ENST00000646243.1NEAT1-2082994No protein-
 
lncRNA
--GENCODE basic
ENST00000687943.1NEAT1-2121204No protein-
 
lncRNA
---
ENST00000642367.1NEAT1-2061145No protein-
 
lncRNA
--GENCODE basic
ENST00000693290.1NEAT1-2141116No protein-
 
lncRNA
---
ENST00000612303.2NEAT1-2041053No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000691530.1NEAT1-213683No protein-
 
lncRNA
---
ENST00000693747.1NEAT1-215683No protein-
 
lncRNA
---
ENST00000616315.2NEAT1-205512No protein-
 
lncRNA
--GENCODE basicTSL:2
Description

Rho guanine nucleotide exchange factor 10 [Source:HGNC Symbol;Acc:HGNC:14103]

Gene Synonyms

Gef10, KIAA0294

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000349830.8ARHGEF10-20156481344aaENSP00000340297.3
 
Protein coding
CCDS34794O15013-5 NM_014629.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000518288.5ARHGEF10-20556481368aaENSP00000431012.1
 
Protein coding
CCDS78296O15013-6 -GENCODE basicTSL:1
ENST00000520359.5ARHGEF10-20754721306aaENSP00000427909.1
 
Protein coding
CCDS78297O15013-7 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000398564.5ARHGEF10-20454801369aaENSP00000381571.1
 
Protein coding
-O15013-1 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000522435.5ARHGEF10-2104343988aaENSP00000427768.1
 
Protein coding
-H0YAN8 -TSL:1CDS 5' incomplete
ENST00000398560.2ARHGEF10-2032221380aaENSP00000381568.2
 
Protein coding
-E9PB39 -GENCODE basicTSL:1
ENST00000521927.1ARHGEF10-209814No protein-
 
Processed transcript
---TSL:5
ENST00000382795.7ARHGEF10-202581No protein-
 
Processed transcript
---TSL:5
ENST00000523596.5ARHGEF10-212559No protein-
 
Processed transcript
---TSL:4
ENST00000524212.1ARHGEF10-215538No protein-
 
Processed transcript
---TSL:4
ENST00000523711.5ARHGEF10-2133468No protein-
 
Retained intron
---TSL:1
ENST00000522969.1ARHGEF10-2112349No protein-
 
Retained intron
---TSL:1
ENST00000520972.5ARHGEF10-2082176No protein-
 
Retained intron
---TSL:5
ENST00000523980.1ARHGEF10-214557No protein-
 
Retained intron
---TSL:4
ENST00000519641.1ARHGEF10-206501No protein-
 
Retained intron
---TSL:3
Description

exportin 1 [Source:HGNC Symbol;Acc:HGNC:12825]

Gene Synonyms

CRM-1, CRM1, emb

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000401558.7XPO1-20149881071aaENSP00000384863.2
 
Protein coding
CCDS33205O14980 NM_003400.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000676667.1XPO1-22058011071aaENSP00000503809.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000677239.1XPO1-23147761071aaENSP00000504087.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000677933.1XPO1-24346961071aaENSP00000503482.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000678182.1XPO1-24746931071aaENSP00000504594.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000677150.1XPO1-22846411071aaENSP00000503167.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000678790.1XPO1-25246101071aaENSP00000503419.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000676553.1XPO1-21946031071aaENSP00000504247.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000677928.1XPO1-24245941071aaENSP00000504198.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000677813.1XPO1-23945491071aaENSP00000504543.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000677814.1XPO1-24045001071aaENSP00000504848.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000677417.1XPO1-23444521071aaENSP00000503572.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1
ENST00000404992.6XPO1-20241051071aaENSP00000385942.2
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1TSL:2
ENST00000406957.5XPO1-20334791071aaENSP00000385559.1
 
Protein coding
CCDS33205O14980 -GENCODE basicAPPRIS P1TSL:1
ENST00000677476.1XPO1-2364613904aaENSP00000503789.1
 
Protein coding
-A0A7I2V488 -GENCODE basic
ENST00000676771.1XPO1-22144401056aaENSP00000503808.1
 
Protein coding
-A0A7I2V461 -GENCODE basic
ENST00000678081.1XPO1-24444371026aaENSP00000503194.1
 
Protein coding
-A0A7I2V2Y6 -GENCODE basic
ENST00000677556.1XPO1-2374390940aaENSP00000504749.1
 
Protein coding
-A0A7I2V6B9 -GENCODE basic
ENST00000677803.1XPO1-2384370999aaENSP00000503702.1
 
Protein coding
-A0A7I2V3W6 -GENCODE basic
ENST00000676999.1XPO1-22642991026aaENSP00000502940.1
 
Protein coding
-A0A7I2V2Y6 -GENCODE basic
ENST00000678877.1XPO1-2534239979aaENSP00000502889.1
 
Protein coding
-A0A7I2V2H0 -GENCODE basic
ENST00000676889.1XPO1-2254215952aaENSP00000503075.1
 
Protein coding
-A0A7I2V2S3 -GENCODE basic
ENST00000676789.1XPO1-22441841007aaENSP00000504617.1
 
Protein coding
-A0A7I2YQV4 -GENCODE basic
ENST00000677850.1XPO1-2413132677aaENSP00000504771.1
 
Protein coding
-A0A7I2YQX3 -GENCODE basic
ENST00000451765.6XPO1-2082424451aaENSP00000413853.2
 
Protein coding
-C9JKM9 -GENCODE basicTSL:3
ENST00000449444.5XPO1-20757962aaENSP00000406819.1
 
Protein coding
-C9IYM2 -TSL:4CDS 3' incomplete
ENST00000443240.5XPO1-206565132aaENSP00000406428.1
 
Protein coding
-C9J673 -TSL:4CDS 3' incomplete
ENST00000428210.5XPO1-205677682aaENSP00000407170.1
 
Nonsense mediated decay
-F8WF71 -TSL:2
ENST00000679035.1XPO1-2544772115aaENSP00000502854.1
 
Nonsense mediated decay
-A0A7I2V2C5 --
ENST00000678360.1XPO1-2494733688aaENSP00000503638.1
 
Nonsense mediated decay
-A0A7I2V4A3 --
ENST00000676783.1XPO1-223466055aaENSP00000503342.1
 
Nonsense mediated decay
-A0A7I2V396 --
ENST00000678172.1XPO1-2464511735aaENSP00000503554.1
 
Nonsense mediated decay
-A0A7I2V3N0 --
ENST00000680228.1XPO1-2554417136aaENSP00000505574.1
 
Nonsense mediated decay
----
ENST00000677422.1XPO1-2354291115aaENSP00000503474.1
 
Nonsense mediated decay
-A0A7I2V3J1 --
ENST00000678263.1XPO1-2484273115aaENSP00000504172.1
 
Nonsense mediated decay
-A0A7I2YQP1 --
ENST00000677289.1XPO1-232423665aaENSP00000504286.1
 
Nonsense mediated decay
-A0A7I2V531 -CDS 5' incomplete
ENST00000678741.1XPO1-2514155941aaENSP00000503395.1
 
Nonsense mediated decay
-A0A7I2V3P3 --
ENST00000420673.6XPO1-2043297No protein-
 
Processed transcript
---TSL:2
ENST00000468259.1XPO1-211600No protein-
 
Processed transcript
---TSL:5
ENST00000476585.5XPO1-214342No protein-
 
Processed transcript
---TSL:2
ENST00000678113.1XPO1-2458930No protein-
 
Retained intron
----
ENST00000677110.1XPO1-2276571No protein-
 
Retained intron
----
ENST00000677290.1XPO1-2335834No protein-
 
Retained intron
----
ENST00000677190.1XPO1-2305126No protein-
 
Retained intron
----
ENST00000481073.6XPO1-2154344No protein-
 
Retained intron
---TSL:2
ENST00000676778.1XPO1-2224270No protein-
 
Retained intron
----
ENST00000677157.1XPO1-2294020No protein-
 
Retained intron
----
ENST00000492182.6XPO1-2173879No protein-
 
Retained intron
---TSL:2
ENST00000469337.2XPO1-2123602No protein-
 
Retained intron
---TSL:4
ENST00000678640.1XPO1-2502998No protein-
 
Retained intron
----
ENST00000461407.5XPO1-2102676No protein-
 
Retained intron
---TSL:2
ENST00000481214.1XPO1-216720No protein-
 
Retained intron
---TSL:2
ENST00000460037.1XPO1-209573No protein-
 
Retained intron
---TSL:4
ENST00000495003.1XPO1-218568No protein-
 
Retained intron
---TSL:2
ENST00000475744.1XPO1-213249No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,676 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000461407.5

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x2896fed0)