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EnsemblEnsembl Home
Description

DIS3 like exosome 3'-5' exoribonuclease [Source:MGI Symbol;Acc:MGI:2143272]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Dis3l-203ENSMUST00000120760.83661970aaENSMUSP00000113503.2
 
Protein coding
CCDS23280Q8C0S1-2 GENCODE basicTSL:1
Dis3l-201ENSMUST00000068367.143605970aaENSMUSP00000063830.8
 
Protein coding
CCDS23280Q8C0S1-2 GENCODE basicTSL:1
Dis3l-208ENSMUST00000168844.935751053aaENSMUSP00000129772.3
 
Protein coding
CCDS52832Q8C0S1-1 GENCODE basicAPPRIS P1TSL:1
Dis3l-202ENSMUST00000113890.23224970aaENSMUSP00000109522.2
 
Protein coding
CCDS23280Q8C0S1-2 GENCODE basicTSL:1
Dis3l-207ENSMUST00000154076.253546aaENSMUSP00000115236.2
 
Protein coding
-D3YUD6 TSL:3CDS 3' incomplete
Dis3l-206ENSMUST00000144257.2485No protein-
 
Processed transcript
--TSL:2
Dis3l-205ENSMUST00000134843.81575No protein-
 
Retained intron
--TSL:1
Dis3l-204ENSMUST00000128129.2441No protein-
 
Retained intron
--TSL:2
Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:MGI Symbol;Acc:MGI:99603]

Gene Synonyms

2610209L14Rik, Snf2l2, brm

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Smarca2-201ENSMUST00000025862.1559211583aaENSMUSP00000025862.8
 
Protein coding
CCDS29720F2Z4A9 GENCODE basicAPPRIS P2TSL:5
Smarca2-203ENSMUST00000112637.101962236aaENSMUSP00000108256.3
 
Protein coding
CCDS37945Q9D007 GENCODE basicTSL:1
Smarca2-242ENSMUST00000208751.21846236aaENSMUSP00000146924.2
 
Protein coding
CCDS37945Q9D007 GENCODE basicTSL:5
Smarca2-246ENSMUST00000209085.21841276aaENSMUSP00000146994.2
 
Protein coding
CCDS84428H3BK47 GENCODE basicTSL:5
Smarca2-238ENSMUST00000208589.21054236aaENSMUSP00000146890.2
 
Protein coding
CCDS37945Q9D007 GENCODE basicTSL:5
Smarca2-210ENSMUST00000176475.9983276aaENSMUSP00000135248.2
 
Protein coding
CCDS84428H3BK47 GENCODE basicTSL:5
Smarca2-209ENSMUST00000176030.858621601aaENSMUSP00000135784.2
 
Protein coding
-H3BLH0 GENCODE basicAPPRIS ALT2TSL:5
Smarca2-216ENSMUST00000176769.957031525aaENSMUSP00000135017.2
 
Protein coding
-H3BJK2 GENCODE basicTSL:5
Smarca2-220ENSMUST00000207054.22333278aaENSMUSP00000146493.2
 
Protein coding
-A0A140LHP6 GENCODE basicTSL:5
Smarca2-231ENSMUST00000208091.21140260aaENSMUSP00000146875.2
 
Protein coding
-A0A140LIM0 GENCODE basicTSL:5
Smarca2-213ENSMUST00000176698.9955254aaENSMUSP00000134914.2
 
Protein coding
-H3BKJ3 GENCODE basicTSL:5
Smarca2-204ENSMUST00000175791.9946254aaENSMUSP00000135412.2
 
Protein coding
-H3BKJ3 GENCODE basicTSL:3
Smarca2-230ENSMUST00000208027.2898296aaENSMUSP00000146392.2
 
Protein coding
-A0A140LHF4 TSL:5CDS 3' incomplete
Smarca2-221ENSMUST00000207118.2834228aaENSMUSP00000146379.2
 
Protein coding
-A0A140LHE2 TSL:3CDS 3' incomplete
Smarca2-239ENSMUST00000208674.2800267aaENSMUSP00000146770.2
 
Protein coding
-A0A140LID0 TSL:5CDS 5' and 3' incomplete
Smarca2-205ENSMUST00000175842.4779211aaENSMUSP00000135800.3
 
Protein coding
-H3BLI4 TSL:2CDS 3' incomplete
Smarca2-227ENSMUST00000207812.2756200aaENSMUSP00000146616.2
 
Protein coding
-A0A140LHZ8 TSL:5CDS 3' incomplete
Smarca2-240ENSMUST00000208705.2745170aaENSMUSP00000146971.2
 
Protein coding
-A0A140LIV3 TSL:5CDS 3' incomplete
Smarca2-233ENSMUST00000208186.2740244aaENSMUSP00000146632.2
 
Protein coding
-A0A140LI14 TSL:5CDS 3' incomplete
Smarca2-228ENSMUST00000207832.2712229aaENSMUSP00000146919.2
 
Protein coding
-A0A140LIQ9 TSL:5CDS 3' incomplete
Smarca2-218ENSMUST00000177252.9709201aaENSMUSP00000134995.3
 
Protein coding
-H3BJI1 TSL:5CDS 3' incomplete
Smarca2-207ENSMUST00000175953.3692149aaENSMUSP00000135042.3
 
Protein coding
-H3BJM2 TSL:3CDS 3' incomplete
Smarca2-235ENSMUST00000208303.2683228aaENSMUSP00000147173.2
 
Protein coding
-A0A140LJD7 TSL:5CDS 5' and 3' incomplete
Smarca2-212ENSMUST00000176584.2645173aaENSMUSP00000135344.2
 
Protein coding
-H3BKD2 TSL:3CDS 3' incomplete
Smarca2-243ENSMUST00000208806.264068aaENSMUSP00000146442.2
 
Protein coding
-A0A140LHJ8 TSL:5CDS 3' incomplete
Smarca2-241ENSMUST00000208712.2630169aaENSMUSP00000147244.2
 
Protein coding
-A0A140LJK1 TSL:5CDS 3' incomplete
Smarca2-232ENSMUST00000208163.242178aaENSMUSP00000146859.2
 
Protein coding
-A0A140LIK7 TSL:5CDS 3' incomplete
Smarca2-202ENSMUST00000099537.959131510aaENSMUSP00000097135.3
 
Nonsense mediated decay
-E9QAB8 TSL:1
Smarca2-215ENSMUST00000176731.32018299aaENSMUSP00000135460.3
 
Nonsense mediated decay
-H3BKN5 TSL:5CDS 5' incomplete
Smarca2-244ENSMUST00000208915.2191472aaENSMUSP00000146432.2
 
Nonsense mediated decay
-A0A140LI08 TSL:1
Smarca2-237ENSMUST00000208541.2112272aaENSMUSP00000146626.2
 
Nonsense mediated decay
-A0A140LI08 TSL:5
Smarca2-234ENSMUST00000208226.275745aaENSMUSP00000146630.2
 
Nonsense mediated decay
-A0A140LI12 TSL:5
Smarca2-226ENSMUST00000207535.250393aaENSMUSP00000146464.2
 
Nonsense mediated decay
-A0A140LHL7 TSL:5CDS 5' incomplete
Smarca2-206ENSMUST00000175935.81584No protein-
 
Processed transcript
--TSL:1
Smarca2-217ENSMUST00000177116.8968No protein-
 
Processed transcript
--TSL:3
Smarca2-223ENSMUST00000207226.2876No protein-
 
Processed transcript
--TSL:5
Smarca2-219ENSMUST00000177484.3736No protein-
 
Processed transcript
--TSL:3
Smarca2-229ENSMUST00000207944.2681No protein-
 
Processed transcript
--TSL:5
Smarca2-224ENSMUST00000207380.2613No protein-
 
Processed transcript
--TSL:5
Smarca2-225ENSMUST00000207418.2576No protein-
 
Processed transcript
--TSL:3
Smarca2-211ENSMUST00000176494.2426No protein-
 
Processed transcript
--TSL:3
Smarca2-222ENSMUST00000207175.22838No protein-
 
Retained intron
--TSL:NA
Smarca2-245ENSMUST00000208984.21924No protein-
 
Retained intron
--TSL:NA
Smarca2-236ENSMUST00000208378.21133No protein-
 
Retained intron
--TSL:5
Smarca2-214ENSMUST00000176700.8867No protein-
 
Retained intron
--TSL:3
Smarca2-208ENSMUST00000176019.2661No protein-
 
Retained intron
--TSL:3
Description

PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]

Gene Synonyms

C21orf83, ZNF298

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
PRDM15-202ENST00000398548.665251141aaENSP00000381556.2
 
Protein coding
-P57071-3 NM_001040424.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
PRDM15-203ENST00000422911.667141161aaENSP00000408592.2
 
Protein coding
-P57071-2 -GENCODE basicAPPRIS ALT2TSL:1
PRDM15-201ENST00000269844.547101207aaENSP00000269844.4
 
Protein coding
-P57071-1 -GENCODE basicAPPRIS ALT2TSL:1
PRDM15-212ENST00000491486.5520173aaENSP00000501856.1
 
Protein coding
-A0A6Q8PFK1 -TSL:3CDS 5' and 3' incomplete
PRDM15-206ENST00000449395.66662518aaENSP00000396943.2
 
Nonsense mediated decay
-P57071-5 -TSL:1
PRDM15-204ENST00000441787.56542478aaENSP00000387958.1
 
Nonsense mediated decay
-Q4W8S1 -TSL:1
PRDM15-205ENST00000447016.649921141aaENSP00000431410.1
 
Nonsense mediated decay
-E7ER26 -TSL:1
PRDM15-214ENST00000496124.1435No protein-
 
Processed transcript
---TSL:3
PRDM15-210ENST00000486812.57072No protein-
 
Retained intron
---TSL:1
PRDM15-208ENST00000470586.52283No protein-
 
Retained intron
---TSL:1
PRDM15-211ENST00000489661.5856No protein-
 
Retained intron
---TSL:3
PRDM15-213ENST00000495217.1703No protein-
 
Retained intron
---TSL:3
PRDM15-207ENST00000465955.1502No protein-
 
Retained intron
---TSL:3
PRDM15-209ENST00000477633.1466No protein-
 
Retained intron
---TSL:2
Description

F-box DNA helicase 1 [Source:MGI Symbol;Acc:MGI:1354699]

Gene Synonyms

Fbx18, Fbxo18

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Fbh1-201ENSMUST00000071564.1435671042aaENSMUSP00000071495.8
 
Protein coding
CCDS15688Q8K2I9-1 GENCODE basicAPPRIS P1TSL:1
Fbh1-205ENSMUST00000131893.2891297aaENSMUSP00000116392.2
 
Protein coding
-A2AS52 TSL:3CDS 5' and 3' incomplete
Fbh1-204ENSMUST00000126543.8898No protein-
 
Processed transcript
--TSL:5
Fbh1-208ENSMUST00000151402.3503No protein-
 
Processed transcript
--TSL:2
Fbh1-210ENSMUST00000192171.2476No protein-
 
Processed transcript
--TSL:3
Fbh1-207ENSMUST00000139292.2358No protein-
 
Processed transcript
--TSL:5
Fbh1-202ENSMUST00000123717.84118No protein-
 
Retained intron
--TSL:1
Fbh1-209ENSMUST00000155604.21064No protein-
 
Retained intron
--TSL:2
Fbh1-203ENSMUST00000123723.2820No protein-
 
Retained intron
--TSL:3
Fbh1-206ENSMUST00000136633.2374No protein-
 
Retained intron
--TSL:2
Description

metal response element binding transcription factor 2 [Source:MGI Symbol;Acc:MGI:105050]

Gene Synonyms

9230112N11Rik, C76717, M96, Pcl2

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Mtf2-201ENSMUST00000081567.114060593aaENSMUSP00000080278.5
 
Protein coding
CCDS39201Q02395-1 GENCODE basicAPPRIS P1TSL:1
Mtf2-202ENSMUST00000112626.81968536aaENSMUSP00000108245.2
 
Protein coding
-E9QAD3 GENCODE basicTSL:5
Mtf2-213ENSMUST00000170319.8778162aaENSMUSP00000130536.2
 
Protein coding
-E9Q5U4 TSL:3CDS 3' incomplete
Mtf2-208ENSMUST00000137996.8718239aaENSMUSP00000121697.2
 
Protein coding
-F6Q1Z6 TSL:5CDS 5' and 3' incomplete
Mtf2-214ENSMUST00000172045.859049aaENSMUSP00000126452.2
 
Protein coding
-E9PYX9 TSL:3CDS 3' incomplete
Mtf2-210ENSMUST00000143412.83330118aaENSMUSP00000132596.2
 
Nonsense mediated decay
-E9PZE8 TSL:1
Mtf2-203ENSMUST00000124195.8254981aaENSMUSP00000126297.2
 
Nonsense mediated decay
-E9PZQ6 TSL:5
Mtf2-207ENSMUST00000134026.81932282aaENSMUSP00000128797.2
 
Nonsense mediated decay
-E9Q8G7 TSL:5
Mtf2-204ENSMUST00000129921.3582129aaENSMUSP00000137843.2
 
Nonsense mediated decay
-M0QWI3 TSL:5CDS 5' incomplete
Mtf2-205ENSMUST00000131264.83732No protein-
 
Processed transcript
--TSL:1
Mtf2-209ENSMUST00000141592.83068No protein-
 
Processed transcript
--TSL:1
Mtf2-215ENSMUST00000198662.52675No protein-
 
Processed transcript
--TSL:1
Mtf2-206ENSMUST00000131291.82355No protein-
 
Processed transcript
--TSL:1
Mtf2-212ENSMUST00000163823.6816No protein-
 
Processed transcript
--TSL:5
Mtf2-211ENSMUST00000163195.2706No protein-
 
Processed transcript
--TSL:3
Mtf2-216ENSMUST00000199194.2673No protein-
 
Retained intron
--TSL:2
Description

ribonuclease H2 subunit B [Source:HGNC Symbol;Acc:HGNC:25671]

Gene Synonyms

AGS2, DLEU8, FLJ11712

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
RNASEH2B-201ENST00000336617.81513312aaENSP00000337623.2
 
Protein coding
CCDS9425Q5TBB1-1 NM_024570.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
RNASEH2B-202ENST00000422660.64885257aaENSP00000389877.1
 
Protein coding
CCDS45047Q5TBB1-2 -GENCODE basicTSL:5
RNASEH2B-242ENST00000646709.14003282aaENSP00000495278.1
 
Protein coding
-A0A087WXR7 -GENCODE basic
RNASEH2B-208ENST00000616907.23410289aaENSP00000482701.2
 
Protein coding
-A0A087WZJ6 -GENCODE basicTSL:3
RNASEH2B-216ENST00000643159.12155324aaENSP00000495587.1
 
Protein coding
-A0A2R8YEH2 -GENCODE basic
RNASEH2B-222ENST00000643774.11837300aaENSP00000495482.1
 
Protein coding
-A0A2R8Y6Q6 -GENCODE basic
RNASEH2B-237ENST00000645955.11829289aaENSP00000495755.1
 
Protein coding
-A0A2R8Y761 -GENCODE basic
RNASEH2B-244ENST00000646960.11711355aaENSP00000496481.1
 
Protein coding
-A0A2R8Y7R8 -GENCODE basic
RNASEH2B-234ENST00000645618.11700263aaENSP00000495429.1
 
Protein coding
-A0A2R8Y6M7 -GENCODE basic
RNASEH2B-243ENST00000646731.11567254aaENSP00000493828.1
 
Protein coding
-A0A2R8YCP1 -GENCODE basic
RNASEH2B-229ENST00000645188.11525309aaENSP00000496224.1
 
Protein coding
-A0A2R8YGP2 -GENCODE basicAPPRIS ALT2
RNASEH2B-213ENST00000642454.11407227aaENSP00000494221.1
 
Protein coding
-A0A2R8YEC1 -GENCODE basic
RNASEH2B-221ENST00000643682.11366293aaENSP00000493655.1
 
Protein coding
-A0A2R8YCJ4 -GENCODE basic
RNASEH2B-238ENST00000645990.11323266aaENSP00000496571.1
 
Protein coding
-A0A2R8Y883 -GENCODE basic
RNASEH2B-206ENST00000611510.51257282aaENSP00000481236.3
 
Protein coding
-A0A087WXR7 -GENCODE basicTSL:5
RNASEH2B-246ENST00000647387.11251227aaENSP00000495487.1
 
Protein coding
-A0A2R8YEC1 -GENCODE basic
RNASEH2B-217ENST00000643215.11185238aaENSP00000495031.1
 
Protein coding
-A0A2R8Y687 -CDS 5' incomplete
RNASEH2B-232ENST00000645370.11139229aaENSP00000494019.1
 
Protein coding
-A0A2R8Y4S2 -CDS 5' incomplete
RNASEH2B-214ENST00000642721.11033320aaENSP00000495650.1
 
Protein coding
-A0A2R8Y6Y1 -CDS 3' incomplete
RNASEH2B-215ENST00000642995.1922273aaENSP00000493499.1
 
Protein coding
-A0A2R8YCX2 -GENCODE basic
RNASEH2B-211ENST00000637648.278089aaENSP00000490077.2
 
Protein coding
-A0A1B0GUE7 -TSL:3CDS 3' incomplete
RNASEH2B-236ENST00000645912.174692aaENSP00000494091.1
 
Protein coding
-A0A2R8Y4Y9 -CDS 5' incomplete
RNASEH2B-223ENST00000644034.1621128aaENSP00000495456.1
 
Protein coding
-A0A2R8YEB4 -GENCODE basic
RNASEH2B-220ENST00000643529.1508104aaENSP00000495920.1
 
Protein coding
-A0A2R8YEU9 -CDS 5' incomplete
RNASEH2B-218ENST00000643405.1492164aaENSP00000493777.1
 
Protein coding
-A0A2R8Y459 -CDS 5' and 3' incomplete
RNASEH2B-210ENST00000636524.24666aaENSP00000489723.2
 
Protein coding
-A0A1B0GTJ2 -TSL:4CDS 3' incomplete
RNASEH2B-224ENST00000644183.1173276aaENSP00000495657.1
 
Nonsense mediated decay
-A0A2R8YEK5 -CDS 5' incomplete
RNASEH2B-239ENST00000646092.11441268aaENSP00000496293.1
 
Nonsense mediated decay
-A0A2R8Y7Q3 --
RNASEH2B-225ENST00000644297.1142848aaENSP00000495519.1
 
Nonsense mediated decay
-A0A2R8YEQ4 --
RNASEH2B-227ENST00000644425.11166243aaENSP00000495302.1
 
Nonsense mediated decay
-A0A2R8YE60 -CDS 5' incomplete
RNASEH2B-228ENST00000644518.1104448aaENSP00000495793.1
 
Nonsense mediated decay
-A0A2R8YEQ4 --
RNASEH2B-212ENST00000642207.170763aaENSP00000496227.1
 
Nonsense mediated decay
-A0A2R8Y7M7 -CDS 5' incomplete
RNASEH2B-241ENST00000646339.163033aaENSP00000495773.1
 
Nonsense mediated decay
-A0A2R8Y6U1 -CDS 5' incomplete
RNASEH2B-219ENST00000643462.149147aaENSP00000496130.1
 
Nonsense mediated decay
-A0A2R8Y7A3 --
RNASEH2B-235ENST00000645712.11254No protein-
 
Processed transcript
----
RNASEH2B-205ENST00000495244.7977No protein-
 
Processed transcript
---TSL:5
RNASEH2B-203ENST00000459681.3649No protein-
 
Processed transcript
---TSL:5
RNASEH2B-240ENST00000646279.17282No protein-
 
Retained intron
----
RNASEH2B-233ENST00000645549.14881No protein-
 
Retained intron
----
RNASEH2B-207ENST00000613449.43328No protein-
 
Retained intron
---TSL:2
RNASEH2B-231ENST00000645333.12196No protein-
 
Retained intron
----
RNASEH2B-230ENST00000645201.12015No protein-
 
Retained intron
----
RNASEH2B-204ENST00000465541.21952No protein-
 
Retained intron
---TSL:5
RNASEH2B-226ENST00000644420.11885No protein-
 
Retained intron
----
RNASEH2B-245ENST00000646964.11806No protein-
 
Retained intron
----
RNASEH2B-209ENST00000621641.1409No protein-
 
Retained intron
---TSL:3
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZp761J1324, NCRNA00043, SOX2OT

NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
SOX2-OT-294ENST00000660576.14101No protein-
 
lncRNA
--Ensembl Canonical
SOX2-OT-292ENST00000656613.14289No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-302ENST00000670501.14282No protein-
 
lncRNA
---
SOX2-OT-298ENST00000665187.14263No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-303ENST00000671456.14240No protein-
 
lncRNA
---
SOX2-OT-293ENST00000657986.14162No protein-
 
lncRNA
---
SOX2-OT-282ENST00000646698.14109No protein-
 
lncRNA
---
SOX2-OT-234ENST00000600801.74085No protein-
 
lncRNA
--TSL:5
SOX2-OT-295ENST00000661842.14077No protein-
 
lncRNA
---
SOX2-OT-291ENST00000654649.14032No protein-
 
lncRNA
---
SOX2-OT-225ENST00000596250.73985No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-218ENST00000498731.63964No protein-
 
lncRNA
--TSL:1
SOX2-OT-275ENST00000645583.23870No protein-
 
lncRNA
---
SOX2-OT-284ENST00000646841.23868No protein-
 
lncRNA
---
SOX2-OT-290ENST00000654538.13844No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-296ENST00000665033.13529No protein-
 
lncRNA
---
SOX2-OT-297ENST00000665112.13462No protein-
 
lncRNA
---
SOX2-OT-287ENST00000647055.13274No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-207ENST00000476964.63226No protein-
 
lncRNA
--GENCODE basicTSL:1
SOX2-OT-286ENST00000647034.12920No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-214ENST00000493116.62779No protein-
 
lncRNA
--TSL:4
SOX2-OT-267ENST00000643236.22454No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-299ENST00000665485.12297No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-263ENST00000642685.12276No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-260ENST00000642301.22271No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-213ENST00000492337.62184No protein-
 
lncRNA
--TSL:2
SOX2-OT-300ENST00000667332.12112No protein-
 
lncRNA
---
SOX2-OT-279ENST00000646296.22094No protein-
 
lncRNA
---
SOX2-OT-262ENST00000642652.22042No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-285ENST00000646949.21980No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-269ENST00000643769.11967No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-272ENST00000644582.11884No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-203ENST00000466034.71772No protein-
 
lncRNA
--TSL:1
SOX2-OT-281ENST00000646683.11766No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-271ENST00000644358.11703No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-248ENST00000628810.21675No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-268ENST00000643667.11622No protein-
 
lncRNA
---
SOX2-OT-274ENST00000645423.21583No protein-
 
lncRNA
---
SOX2-OT-259ENST00000642218.11500No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-265ENST00000642922.11468No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-264ENST00000642823.11444No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-280ENST00000646508.11390No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-226ENST00000597347.51342No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-261ENST00000642429.11279No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-273ENST00000644732.11242No protein-
 
lncRNA
---
SOX2-OT-215ENST00000493521.51239No protein-
 
lncRNA
--GENCODE basicTSL:3
SOX2-OT-289ENST00000647552.11238No protein-
 
lncRNA
---
SOX2-OT-276ENST00000645960.11199No protein-
 
lncRNA
---
SOX2-OT-209ENST00000485035.31162No protein-
 
lncRNA
--GENCODE basicTSL:4
SOX2-OT-270ENST00000644304.11115No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-266ENST00000643131.21097No protein-
 
lncRNA
--GENCODE basic
SOX2-OT-288ENST00000647179.11068No protein-
 
lncRNA
---
SOX2-OT-212ENST00000491282.61040No protein-
 
lncRNA
--TSL:1
SOX2-OT-255ENST00000630482.21012No protein-
 
lncRNA
--TSL:5
SOX2-OT-283ENST00000646712.1989No protein-
 
lncRNA
---
SOX2-OT-206ENST00000476125.5979No protein-
 
lncRNA
--TSL:3
SOX2-OT-258ENST00000631025.2954No protein-
 
lncRNA
--TSL:5
SOX2-OT-256ENST00000630553.1905No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-208ENST00000477928.1902No protein-
 
lncRNA
--TSL:2
SOX2-OT-242ENST00000627530.3873No protein-
 
lncRNA
--TSL:5
SOX2-OT-228ENST00000597828.5864No protein-
 
lncRNA
--TSL:5
SOX2-OT-222ENST00000595084.3850No protein-
 
lncRNA
--TSL:5
SOX2-OT-244ENST00000628211.2847No protein-
 
lncRNA
--TSL:5
SOX2-OT-240ENST00000626948.2836No protein-
 
lncRNA
--TSL:5
SOX2-OT-231ENST00000599082.2836No protein-
 
lncRNA
--TSL:5
SOX2-OT-247ENST00000628496.3798No protein-
 
lncRNA
--TSL:5
SOX2-OT-278ENST00000646056.1796No protein-
 
lncRNA
---
SOX2-OT-232ENST00000600386.6789No protein-
 
lncRNA
--TSL:5
SOX2-OT-241ENST00000627501.3772No protein-
 
lncRNA
--TSL:5
SOX2-OT-233ENST00000600778.3762No protein-
 
lncRNA
--TSL:5
SOX2-OT-249ENST00000629112.3759No protein-
 
lncRNA
--TSL:5
SOX2-OT-220ENST00000593549.6753No protein-
 
lncRNA
--TSL:5
SOX2-OT-210ENST00000487240.3751No protein-
 
lncRNA
--TSL:5
SOX2-OT-257ENST00000630887.3745No protein-
 
lncRNA
--TSL:5
SOX2-OT-245ENST00000628343.3743No protein-
 
lncRNA
--TSL:5
SOX2-OT-239ENST00000626802.2737No protein-
 
lncRNA
--TSL:5
SOX2-OT-224ENST00000595313.5716No protein-
 
lncRNA
--TSL:5
SOX2-OT-243ENST00000627738.1692No protein-
 
lncRNA
--TSL:5
SOX2-OT-252ENST00000629781.3690No protein-
 
lncRNA
--TSL:5
SOX2-OT-253ENST00000629830.3677No protein-
 
lncRNA
--TSL:5
SOX2-OT-221ENST00000594942.5675No protein-
 
lncRNA
--TSL:5
SOX2-OT-238ENST00000626619.2660No protein-
 
lncRNA
--GENCODE basicTSL:5
SOX2-OT-301ENST00000668295.1654No protein-
 
lncRNA
---
SOX2-OT-254ENST00000630150.2649No protein-
 
lncRNA
--TSL:5
SOX2-OT-227ENST00000597651.6626No protein-
 
lncRNA
--TSL:5
SOX2-OT-237ENST00000626299.3619No protein-
 
lncRNA
--TSL:5
SOX2-OT-201ENST00000460739.5609No protein-
 
lncRNA
--TSL:4
SOX2-OT-223ENST00000595287.1581No protein-
 
lncRNA
--TSL:5
SOX2-OT-216ENST00000497122.5578No protein-
 
lncRNA
--TSL:4
SOX2-OT-250ENST00000629273.2575No protein-
 
lncRNA
--TSL:5
SOX2-OT-251ENST00000629552.2572No protein-
 
lncRNA
--TSL:5
SOX2-OT-202ENST00000461063.6566No protein-
 
lncRNA
--TSL:3
SOX2-OT-204ENST00000469278.5561No protein-
 
lncRNA
--TSL:4
SOX2-OT-217ENST00000498226.5560No protein-
 
lncRNA
--TSL:4
SOX2-OT-229ENST00000598474.4512No protein-
 
lncRNA
--TSL:5
SOX2-OT-236ENST00000625581.2495No protein-
 
lncRNA
--TSL:5
SOX2-OT-235ENST00000600962.6469No protein-
 
lncRNA
--TSL:5
SOX2-OT-219ENST00000593330.1468No protein-
 
lncRNA
--TSL:3
SOX2-OT-205ENST00000472856.1454No protein-
 
lncRNA
--TSL:2
SOX2-OT-246ENST00000628347.1445No protein-
 
lncRNA
--TSL:5
SOX2-OT-277ENST00000645983.1392No protein-
 
lncRNA
---
SOX2-OT-211ENST00000490005.2383No protein-
 
lncRNA
--TSL:2
SOX2-OT-230ENST00000598867.1348No protein-
 
lncRNA
--TSL:5
Description

NADH:ubiquinone oxidoreductase core subunit S1 [Source:MGI Symbol;Acc:MGI:2443241]

Gene Synonyms

5830412M15Rik, 9930026A05Rik

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Ndufs1-201ENSMUST00000027111.152661727aaENSMUSP00000027111.9
 
Protein coding
CCDS14996Q91VD9 GENCODE basicAPPRIS P1TSL:1
Ndufs1-203ENSMUST00000168099.92590727aaENSMUSP00000126621.3
 
Protein coding
CCDS14996Q91VD9 GENCODE basicAPPRIS P1TSL:1
Ndufs1-207ENSMUST00000185847.265561aaENSMUSP00000141190.2
 
Protein coding
-A0A087WSU3 TSL:5CDS 3' incomplete
Ndufs1-205ENSMUST00000185732.7651118aaENSMUSP00000140307.2
 
Protein coding
-A0A087WQR0 TSL:5CDS 3' incomplete
Ndufs1-211ENSMUST00000188370.7516135aaENSMUSP00000139664.2
 
Protein coding
-A0A087WP77 TSL:5CDS 3' incomplete
Ndufs1-204ENSMUST00000185412.736879aaENSMUSP00000140467.2
 
Protein coding
-A0A087WR47 TSL:5CDS 3' incomplete
Ndufs1-212ENSMUST00000189664.233219aaENSMUSP00000140819.2
 
Protein coding
-A0A087WRY4 TSL:3CDS 3' incomplete
Ndufs1-209ENSMUST00000187756.749362aaENSMUSP00000140072.2
 
Nonsense mediated decay
-A0A087WQ77 TSL:3CDS 5' incomplete
Ndufs1-208ENSMUST00000186569.22610No protein-
 
Retained intron
--TSL:NA
Ndufs1-202ENSMUST00000140612.21922No protein-
 
Retained intron
--TSL:1
Ndufs1-206ENSMUST00000185827.71775No protein-
 
Retained intron
--TSL:1
Ndufs1-213ENSMUST00000190095.21366No protein-
 
Retained intron
--TSL:NA
Ndufs1-210ENSMUST00000187835.2826No protein-
 
Retained intron
--TSL:2
Description

plakophilin 4 [Source:HGNC Symbol;Acc:HGNC:9026]

Gene Synonyms

p0071

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
PKP4-202ENST00000389759.846031192aaENSP00000374409.3
 
Protein coding
CCDS33305Q99569-1 NM_003628.6MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
PKP4-201ENST00000389757.757771149aaENSP00000374407.3
 
Protein coding
CCDS33306Q99569-2 -GENCODE basicAPPRIS ALT1TSL:1
PKP4-217ENST00000628904.238561208aaENSP00000486320.1
 
Protein coding
-A0A0D9SF60 -GENCODE basicTSL:5
PKP4-218ENST00000629219.116253aaENSP00000486877.1
 
Protein coding
-E7EP40 -GENCODE basicTSL:5
PKP4-205ENST00000426248.74134216aaENSP00000396827.2
 
Nonsense mediated decay
-E7EST6 -TSL:1
PKP4-204ENST00000421462.53099216aaENSP00000393872.1
 
Nonsense mediated decay
-E7EST6 -TSL:2
PKP4-206ENST00000452162.5235946aaENSP00000407218.1
 
Nonsense mediated decay
-E9PHJ1 -TSL:1
PKP4-211ENST00000481115.2884166aaENSP00000437815.1
 
Nonsense mediated decay
-H0YFB1 -TSL:5CDS 5' incomplete
PKP4-203ENST00000411900.555295aaENSP00000392515.1
 
Nonsense mediated decay
-E7EMY7 -TSL:4
PKP4-207ENST00000457109.552053aaENSP00000391658.1
 
Nonsense mediated decay
-E7EP40 -TSL:3
PKP4-216ENST00000495123.5580No protein-
 
Processed transcript
---TSL:5
PKP4-208ENST00000462335.1561No protein-
 
Processed transcript
---TSL:4
PKP4-209ENST00000479398.5550No protein-
 
Processed transcript
---TSL:5
PKP4-215ENST00000494945.1522No protein-
 
Processed transcript
---TSL:5
PKP4-210ENST00000480171.72772No protein-
 
Retained intron
---TSL:2
PKP4-213ENST00000486254.31566No protein-
 
Retained intron
---TSL:2
PKP4-214ENST00000492496.1796No protein-
 
Retained intron
---TSL:3
PKP4-212ENST00000483881.1452No protein-
 
Retained intron
---TSL:2
Description

inosine monophosphate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:6053]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
IMPDH2-201ENST00000326739.91651514aaENSP00000321584.4
 
Protein coding
CCDS2786A0A384N6C2 P12268 NM_000884.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
IMPDH2-202ENST00000429182.61751538aaENSP00000393525.2
 
Protein coding
-H0Y4R1 -GENCODE basicTSL:5
IMPDH2-232ENST00000678724.11662513aaENSP00000503874.1
 
Protein coding
---GENCODE basic
IMPDH2-217ENST00000677010.11657522aaENSP00000503089.1
 
Protein coding
---GENCODE basic
IMPDH2-203ENST00000442157.21538489aaENSP00000403502.2
 
Protein coding
-E7ETK5 -GENCODE basicTSL:2
IMPDH2-223ENST00000677480.11704123aaENSP00000504378.1
 
Nonsense mediated decay
----
IMPDH2-235ENST00000679117.1162847aaENSP00000503240.1
 
Nonsense mediated decay
----
IMPDH2-230ENST00000678177.14906No protein-
 
Retained intron
----
IMPDH2-226ENST00000677740.14351No protein-
 
Retained intron
----
IMPDH2-222ENST00000677344.14036No protein-
 
Retained intron
----
IMPDH2-218ENST00000677108.13659No protein-
 
Retained intron
----
IMPDH2-234ENST00000679019.13597No protein-
 
Retained intron
----
IMPDH2-229ENST00000678085.13325No protein-
 
Retained intron
----
IMPDH2-220ENST00000677185.13185No protein-
 
Retained intron
----
IMPDH2-215ENST00000676708.12865No protein-
 
Retained intron
----
IMPDH2-216ENST00000676864.12817No protein-
 
Retained intron
----
IMPDH2-227ENST00000677991.12758No protein-
 
Retained intron
----
IMPDH2-231ENST00000678603.12663No protein-
 
Retained intron
----
IMPDH2-236ENST00000679339.12426No protein-
 
Retained intron
----
IMPDH2-221ENST00000677205.12369No protein-
 
Retained intron
----
IMPDH2-214ENST00000676627.12315No protein-
 
Retained intron
----
IMPDH2-224ENST00000677519.12295No protein-
 
Retained intron
----
IMPDH2-204ENST00000462980.22110No protein-
 
Retained intron
---TSL:2
IMPDH2-228ENST00000678001.12078No protein-
 
Retained intron
----
IMPDH2-225ENST00000677593.12078No protein-
 
Retained intron
----
IMPDH2-219ENST00000677168.12057No protein-
 
Retained intron
----
IMPDH2-213ENST00000676607.11881No protein-
 
Retained intron
----
IMPDH2-207ENST00000472328.21749No protein-
 
Retained intron
---TSL:3
IMPDH2-233ENST00000678920.11743No protein-
 
Retained intron
----
IMPDH2-211ENST00000491610.21742No protein-
 
Retained intron
---TSL:5
IMPDH2-210ENST00000485500.1852No protein-
 
Retained intron
---TSL:3
IMPDH2-208ENST00000481274.1840No protein-
 
Retained intron
---TSL:2
IMPDH2-212ENST00000496837.1760No protein-
 
Retained intron
---TSL:2
IMPDH2-206ENST00000466147.5691No protein-
 
Retained intron
---TSL:2
IMPDH2-209ENST00000484872.1643No protein-
 
Retained intron
---TSL:2
IMPDH2-205ENST00000463903.1420No protein-
 
Retained intron
---TSL:2
Description

fibroblast growth factor receptor 2 [Source:HGNC Symbol;Acc:HGNC:3689]

Gene Synonyms

BEK, CD332, CEK3, CFD1, ECT1, JWS, K-SAM, KGFR, TK14, TK25

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
FGFR2-206ENST00000358487.104624821aaENSP00000351276.6
 
Protein coding
CCDS31298P21802-1 NM_000141.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
FGFR2-235ENST00000683211.16964819aaENSP00000508257.1
 
Protein coding
CCDS81515--GENCODE basicAPPRIS ALT2
FGFR2-203ENST00000351936.114761819aaENSP00000309878.10
 
Protein coding
CCDS81515A0A0A0MR25 -GENCODE basicAPPRIS ALT2TSL:5
FGFR2-224ENST00000613048.44369732aaENSP00000484154.1
 
Protein coding
CCDS73210D2CGD1 -GENCODE basicTSL:5
FGFR2-218ENST00000478859.53990593aaENSP00000474011.1
 
Protein coding
CCDS81514S4R381 -GENCODE basicTSL:1
FGFR2-230ENST00000682550.13887704aaENSP00000507633.1
 
Protein coding
CCDS44485--GENCODE basic
FGFR2-213ENST00000369061.83803709aaENSP00000358057.4
 
Protein coding
CCDS44486P21802-23 -GENCODE basicTSL:1
FGFR2-205ENST00000357555.93690707aaENSP00000350166.5
 
Protein coding
CCDS53584P21802-21 -GENCODE basicTSL:2
FGFR2-204ENST00000356226.83547704aaENSP00000348559.4
 
Protein coding
CCDS44485P21802-20 -GENCODE basicTSL:1
FGFR2-212ENST00000369060.83244705aaENSP00000358056.4
 
Protein coding
CCDS44487P21802-15 -GENCODE basicTSL:1
FGFR2-215ENST00000457416.63061822aaENSP00000410294.2
 
Protein coding
CCDS7620P21802-3 -GENCODE basicAPPRIS ALT2TSL:1
FGFR2-208ENST00000360144.73001680aaENSP00000353262.3
 
Protein coding
CCDS44488P21802-22 -GENCODE basicTSL:2
FGFR2-209ENST00000369056.52650769aaENSP00000358052.1
 
Protein coding
CCDS44489P21802-17 -GENCODE basicTSL:1
FGFR2-202ENST00000346997.62472819aaENSP00000263451.5
 
Protein coding
CCDS81515P21802-5 -GENCODE basicAPPRIS ALT2TSL:5
FGFR2-240ENST00000684153.14251670aaENSP00000506937.1
 
Protein coding
---GENCODE basic
FGFR2-231ENST00000682772.13638429aaENSP00000506848.1
 
Protein coding
---GENCODE basic
FGFR2-234ENST00000683035.13615153aaENSP00000507074.1
 
Protein coding
---GENCODE basic
FGFR2-227ENST00000638709.23290429aaENSP00000491912.2
 
Protein coding
-A0A1W2PQT9 -GENCODE basicTSL:5
FGFR2-211ENST00000369059.53003707aaENSP00000358055.1
 
Protein coding
-E7EVR7 -GENCODE basicTSL:5
FGFR2-210ENST00000369058.72727768aaENSP00000358054.3
 
Protein coding
-A0A5S6RJB7 -TSL:1CDS 3' incomplete
FGFR2-201ENST00000336553.102593669aaENSP00000337665.6
 
Protein coding
-H7BXU9 -TSL:5CDS 3' incomplete
FGFR2-207ENST00000359354.61680254aaENSP00000352309.2
 
Protein coding
-P21802-14 -GENCODE basicTSL:1
FGFR2-214ENST00000429361.51138371aaENSP00000404219.1
 
Protein coding
-H7C265 -TSL:5CDS 5' incomplete
FGFR2-225ENST00000613324.4579136aaENSP00000481464.1
 
Protein coding
-A0A087WY21 -TSL:2CDS 5' incomplete
FGFR2-223ENST00000611527.143564aaENSP00000484892.1
 
Protein coding
-A0A087X2D1 -GENCODE basicTSL:3
FGFR2-226ENST00000636922.1587144aaENSP00000490905.1
 
Non stop decay
-A0A1B0GWF4 -TSL:5
FGFR2-236ENST00000683250.15108137aaENSP00000506847.1
 
Nonsense mediated decay
----
FGFR2-222ENST00000604236.53501251aaENSP00000474109.1
 
Nonsense mediated decay
-S4R3B2 -TSL:1
FGFR2-232ENST00000682904.12796No protein-
 
Processed transcript
----
FGFR2-219ENST00000490349.51478No protein-
 
Processed transcript
---TSL:1
FGFR2-220ENST00000491111.1574No protein-
 
Processed transcript
---TSL:3
FGFR2-217ENST00000467584.1497No protein-
 
Processed transcript
---TSL:3
FGFR2-216ENST00000463870.5386No protein-
 
Processed transcript
---TSL:5
FGFR2-237ENST00000683418.16317No protein-
 
Retained intron
----
FGFR2-241ENST00000684516.14989No protein-
 
Retained intron
----
FGFR2-233ENST00000683029.13969No protein-
 
Retained intron
----
FGFR2-228ENST00000682296.13318No protein-
 
Retained intron
----
FGFR2-239ENST00000683885.11838No protein-
 
Retained intron
----
FGFR2-238ENST00000683678.11191No protein-
 
Retained intron
----
FGFR2-229ENST00000682400.1846No protein-
 
Retained intron
----
FGFR2-221ENST00000491475.1730No protein-
 
Retained intron
---TSL:2
Description

grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]

Gene Synonyms

BOM, DFNA28, FLJ13782, TFCP2L3

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
GRHL2-206ENST00000646743.15232625aaENSP00000495564.1
 
Protein coding
CCDS34931Q6ISB3-1 NM_024915.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1
GRHL2-201ENST00000395927.12140609aaENSP00000379260.1
 
Protein coding
CCDS83312Q6ISB3-2 -GENCODE basicTSL:2
GRHL2-205ENST00000521085.12366aaENSP00000430473.1
 
Protein coding
---TSL:3CDS 3' incomplete
GRHL2-204ENST00000517674.5324No protein-
 
Processed transcript
---TSL:5
GRHL2-202ENST00000472106.21178No protein-
 
Retained intron
---TSL:1
GRHL2-203ENST00000474338.1388No protein-
 
Retained intron
---TSL:3
Description

valosin containing protein [Source:HGNC Symbol;Acc:HGNC:12666]

Gene Synonyms

CDC48, IBMPFD, TERA, p97

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VCP-201ENST00000358901.113746806aaENSP00000351777.6
 
Protein coding
CCDS6573P55072 V9HW80 NM_007126.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VCP-221ENST00000679902.16033772aaENSP00000506338.1
 
Protein coding
---GENCODE basic
VCP-209ENST00000677257.14404804aaENSP00000504354.1
 
Protein coding
---GENCODE basicAPPRIS ALT1
VCP-212ENST00000678650.14362761aaENSP00000503426.1
 
Protein coding
---GENCODE basic
VCP-203ENST00000448530.63849761aaENSP00000392088.2
 
Protein coding
-C9IZA5 -GENCODE basicTSL:5
VCP-202ENST00000417448.23382761aaENSP00000399456.2
 
Protein coding
-C9JUP7 -GENCODE basicTSL:3
VCP-219ENST00000679862.13159760aaENSP00000504990.1
 
Protein coding
---GENCODE basic
VCP-231ENST00000681335.13077754aaENSP00000505230.1
 
Protein coding
---GENCODE basic
VCP-217ENST00000679647.12895733aaENSP00000506216.1
 
Protein coding
---GENCODE basic
VCP-233ENST00000681537.1130376aaENSP00000505847.1
 
Protein coding
---CDS 5' incomplete
VCP-227ENST00000680834.1709237aaENSP00000506387.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-232ENST00000681386.146255aaENSP00000505509.1
 
Protein coding
---CDS 3' incomplete
VCP-234ENST00000681562.1328110aaENSP00000505893.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-215ENST00000679449.1321107aaENSP00000506658.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-228ENST00000680900.1306102aaENSP00000505674.1
 
Protein coding
---CDS 5' and 3' incomplete
VCP-210ENST00000678018.1448043aaENSP00000503811.1
 
Nonsense mediated decay
----
VCP-211ENST00000678465.14451334aaENSP00000504259.1
 
Nonsense mediated decay
----
VCP-229ENST00000680916.13264694aaENSP00000505769.1
 
Nonsense mediated decay
----
VCP-213ENST00000679204.22987458aaENSP00000503131.2
 
Nonsense mediated decay
----
VCP-222ENST00000680079.180956aaENSP00000506523.1
 
Nonsense mediated decay
----
VCP-224ENST00000680520.146377aaENSP00000505308.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-230ENST00000681125.144147aaENSP00000505052.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-226ENST00000680731.143677aaENSP00000505497.1
 
Nonsense mediated decay
----
VCP-236ENST00000681789.136450aaENSP00000505142.1
 
Nonsense mediated decay
---CDS 5' incomplete
VCP-225ENST00000680575.1510No protein-
 
Processed transcript
----
VCP-220ENST00000679901.1458No protein-
 
Processed transcript
----
VCP-223ENST00000680108.1415No protein-
 
Processed transcript
----
VCP-214ENST00000679392.1271No protein-
 
Processed transcript
----
VCP-216ENST00000679599.15506No protein-
 
Retained intron
----
VCP-235ENST00000681690.14691No protein-
 
Retained intron
----
VCP-218ENST00000679800.14561No protein-
 
Retained intron
----
VCP-208ENST00000676836.23597No protein-
 
Retained intron
----
VCP-207ENST00000493886.52942No protein-
 
Retained intron
---TSL:2
VCP-206ENST00000480327.22162No protein-
 
Retained intron
---TSL:5
VCP-205ENST00000479300.21159No protein-
 
Retained intron
---TSL:1
VCP-204ENST00000466100.1508No protein-
 
Retained intron
---TSL:2
Description

WD repeat domain 62 [Source:HGNC Symbol;Acc:HGNC:24502]

Gene Synonyms

C19orf14, DKFZP434J046, FLJ33298, MCPH2

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
WDR62-203ENST00000401500.747271523aaENSP00000384792.1
 
Protein coding
CCDS46059O43379-4 NM_001083961.2MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
WDR62-201ENST00000270301.1246341518aaENSP00000270301.6
 
Protein coding
CCDS33001O43379-1 -GENCODE basicAPPRIS ALT2TSL:5
WDR62-214ENST00000679714.147081521aaENSP00000506627.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
WDR62-213ENST00000679682.147021518aaENSP00000506226.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
WDR62-223ENST00000680403.146271434aaENSP00000505677.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
WDR62-225ENST00000680564.144781440aaENSP00000505582.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
WDR62-215ENST00000679757.143391406aaENSP00000505158.1
 
Protein coding
---GENCODE basic
WDR62-217ENST00000680211.12066390aaENSP00000506102.1
 
Protein coding
---GENCODE basic
WDR62-202ENST00000378860.81980414aaENSP00000504870.1
 
Protein coding
---GENCODE basicTSL:2
WDR62-221ENST00000680359.11945615aaENSP00000506079.1
 
Protein coding
---GENCODE basic
WDR62-235ENST00000681542.11672425aaENSP00000505251.1
 
Protein coding
---GENCODE basic
WDR62-219ENST00000680321.11659420aaENSP00000505525.1
 
Protein coding
---GENCODE basic
WDR62-204ENST00000427823.31202375aaENSP00000413475.4
 
Protein coding
-H7C3R4 -TSL:5CDS 3' incomplete
WDR62-231ENST00000680858.1937313aaENSP00000505451.1
 
Protein coding
---CDS 5' and 3' incomplete
WDR62-210ENST00000679422.1899300aaENSP00000505316.1
 
Protein coding
---CDS 5' and 3' incomplete
WDR62-205ENST00000587391.65973483aaENSP00000465525.1
 
Nonsense mediated decay
-O43379-2 -TSL:1
WDR62-230ENST00000680806.15159425aaENSP00000506418.1
 
Nonsense mediated decay
----
WDR62-216ENST00000679858.15020319aaENSP00000505655.1
 
Nonsense mediated decay
----
WDR62-226ENST00000680590.14655515aaENSP00000505350.1
 
Nonsense mediated decay
----
WDR62-238ENST00000681625.14610882aaENSP00000505555.1
 
Nonsense mediated decay
----
WDR62-209ENST00000679357.12658369aaENSP00000506376.1
 
Nonsense mediated decay
---CDS 5' incomplete
WDR62-208ENST00000644764.21694414aaENSP00000494253.2
 
Nonsense mediated decay
-A0A2R8YD43 --
WDR62-228ENST00000680739.1166791aaENSP00000505170.1
 
Nonsense mediated decay
---CDS 5' incomplete
WDR62-212ENST00000679598.11397313aaENSP00000504936.1
 
Nonsense mediated decay
---CDS 5' incomplete
WDR62-227ENST00000680597.1138572aaENSP00000505037.1
 
Nonsense mediated decay
---CDS 5' incomplete
WDR62-240ENST00000681809.11143149aaENSP00000505740.1
 
Nonsense mediated decay
----
WDR62-234ENST00000681302.11125214aaENSP00000505966.1
 
Nonsense mediated decay
---CDS 5' incomplete
WDR62-222ENST00000680377.11013184aaENSP00000505055.1
 
Nonsense mediated decay
---CDS 5' incomplete
WDR62-233ENST00000681088.1882210aaENSP00000504920.1
 
Nonsense mediated decay
---CDS 5' incomplete
WDR62-211ENST00000679489.146491aaENSP00000505399.1
 
Nonsense mediated decay
---CDS 5' incomplete
WDR62-220ENST00000680349.13298No protein-
 
Retained intron
----
WDR62-229ENST00000680773.13137No protein-
 
Retained intron
----
WDR62-224ENST00000680489.12987No protein-
 
Retained intron
----
WDR62-207ENST00000608676.22976No protein-
 
Retained intron
---TSL:2
WDR62-239ENST00000681648.12672No protein-
 
Retained intron
----
WDR62-232ENST00000680997.12545No protein-
 
Retained intron
----
WDR62-237ENST00000681608.12456No protein-
 
Retained intron
----
WDR62-218ENST00000680280.12022No protein-
 
Retained intron
----
WDR62-206ENST00000589953.21902No protein-
 
Retained intron
---TSL:3
WDR62-236ENST00000681597.1641No protein-
 
Retained intron
----
Description

malate dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:6970]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
MDH1-201ENST00000233114.131296334aaENSP00000233114.8
 
Protein coding
CCDS1874P40925-1 NM_005917.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
MDH1-216ENST00000544381.41647334aaENSP00000446395.2
 
Protein coding
CCDS1874P40925-1 -GENCODE basicAPPRIS P1TSL:2
MDH1-205ENST00000432309.61443352aaENSP00000410073.2
 
Protein coding
CCDS56121C9JF79 -GENCODE basicTSL:5
MDH1-215ENST00000539945.71296353aaENSP00000438144.3
 
Protein coding
-A0A5K1VW95 -GENCODE basicTSL:2
MDH1-202ENST00000409476.5808210aaENSP00000386719.1
 
Protein coding
-B9A041 -GENCODE basicTSL:5
MDH1-207ENST00000442225.578567aaENSP00000399004.1
 
Protein coding
-C9IZI0 -TSL:5CDS 3' incomplete
MDH1-203ENST00000409908.5700169aaENSP00000386743.1
 
Protein coding
-B8ZZ51 -GENCODE basicTSL:3
MDH1-206ENST00000436321.5680119aaENSP00000394504.1
 
Protein coding
-C9JRL4 -TSL:3CDS 3' incomplete
MDH1-208ENST00000454035.5575114aaENSP00000409027.1
 
Protein coding
-C9JLV6 -TSL:3CDS 3' incomplete
MDH1-204ENST00000421012.2134687aaENSP00000400937.1
 
Nonsense mediated decay
-F8WFC2 -TSL:4
MDH1-209ENST00000462944.1634No protein-
 
Processed transcript
---TSL:3
MDH1-210ENST00000472098.5936No protein-
 
Retained intron
---TSL:1
MDH1-211ENST00000484538.1910No protein-
 
Retained intron
---TSL:2
MDH1-213ENST00000485781.5893No protein-
 
Retained intron
---TSL:2
MDH1-212ENST00000485155.1571No protein-
 
Retained intron
---TSL:1
MDH1-214ENST00000495083.1552No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,647 bps, Translation length: 334 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS1874

Uniprot

This transcript corresponds to the following Uniprot identifiers: P40925

Transcript Support Level (TSL)

TSL:2

Version

ENST00000544381.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x37a14a70)