big bang
bbg
Primary_assembly 3L: 14,412,828-14,536,276 reverse strand.
BDGP6.46:AE014296.5
This gene has 8 transcripts (splice variants).
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| FBtr0308596 | bbg-RK | 8707 | 2637aa | FBpp0300820 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5XVG1 Q15K23 Q15K35 Q9VUE8 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273422 | bbg-RC | 8691 | 2637aa | FBpp0271930 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9VUE8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273427 | bbg-RJ | 5997 | 1842aa | FBpp0271935 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q15K24 Q8MT55 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273425 | bbg-RG | 4221 | 1033aa | FBpp0271933 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q17Q80 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273428 | bbg-RI | 4159 | 1095aa | FBpp0271936 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q15K31 Q9VUE7 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273424 | bbg-RF | 4131 | 1033aa | FBpp0271932 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q15K25 Q15K26 Q15K28 Q15K29 Q15K30 Q15K32 Q15K34 Q17Q80 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273426 | bbg-RH | 3960 | 1033aa | FBpp0271934 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q17Q80 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| FBtr0273423 | bbg-RE | 3949 | 1101aa | FBpp0271931 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q15K33 Q17Q84 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
