Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: aup1 ENSDARG00000092609

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Description

AUP1 lipid droplet regulating VLDL assembly factor [Source:NCBI gene;Acc:324654]

Gene Synonyms

wu:fc37d06, zgc:77755

Location

Chromosome 14: 5,835,134-5,860,184 forward strand.

GRCz11:CM002898.2

About this gene

This gene has 4 transcripts (splice variants) and 199 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054867.6	aup1-201	1866	423aa	ENSDARP00000054866.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140260.3	aup1-202	865	82aa	ENSDARP00000124945.1	Nonsense mediated decay	F8W5X2	-
ENSDART00000148224.3	aup1-204	879	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000147437.2	aup1-203	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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