Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: 4933407K13Rik ENSMUSG00000087396

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Description

RIKEN cDNA 4933407K13 gene [Source:MGI Symbol;Acc:MGI:1921646]

Location

Chromosome X: 74,750,538-74,808,347 reverse strand.

GRCm39:CM001013.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000138943.8	4933407K13Rik-203	4364	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000130744.9	4933407K13Rik-202	3378	No protein	-	lncRNA		The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000240820.1	4933407K13Rik-206	3221	No protein	-	lncRNA		-
ENSMUST00000245205.1	4933407K13Rik-218	2993	No protein	-	lncRNA		-
ENSMUST00000245187.1	4933407K13Rik-217	2513	No protein	-	lncRNA		-
ENSMUST00000241972.1	4933407K13Rik-208	2224	No protein	-	lncRNA		-
ENSMUST00000244802.1	4933407K13Rik-215	2184	No protein	-	lncRNA		-
ENSMUST00000244710.1	4933407K13Rik-214	2057	No protein	-	lncRNA		-
ENSMUST00000245294.1	4933407K13Rik-219	1993	No protein	-	lncRNA		-
ENSMUST00000244394.1	4933407K13Rik-212	1991	No protein	-	lncRNA		-
ENSMUST00000244534.1	4933407K13Rik-213	1905	No protein	-	lncRNA		-
ENSMUST00000244981.1	4933407K13Rik-216	1855	No protein	-	lncRNA		-
ENSMUST00000241054.1	4933407K13Rik-207	1699	No protein	-	lncRNA		-
ENSMUST00000242475.1	4933407K13Rik-210	1668	No protein	-	lncRNA		-
ENSMUST00000244320.1	4933407K13Rik-211	1346	No protein	-	lncRNA		-
ENSMUST00000129980.8	4933407K13Rik-201	1243	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000242014.1	4933407K13Rik-209	1226	No protein	-	lncRNA		-
ENSMUST00000140409.2	4933407K13Rik-204	839	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000151267.2	4933407K13Rik-205	693	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data