Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: 2510009E07Rik ENSMUSG00000043391

.

Description

RIKEN cDNA 2510009E07 gene [Source:MGI Symbol;Acc:MGI:1919440]

Location

Chromosome 16: 21,467,795-21,513,415 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and is associated with 17 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000053336.8	2510009E07Rik-201	5164	248aa	ENSMUSP00000062303.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28062	Q6GQU0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000231592.2	2510009E07Rik-202	1135	63aa	ENSMUSP00000156243.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P700	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000232164.2	2510009E07Rik-203	508	140aa	ENSMUSP00000156099.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P6S4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000232634.2	2510009E07Rik-204	1695	63aa	ENSMUSP00000156172.2	Nonsense mediated decay		A0A338P700	-

.

Strains

.

Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data