Transcript: ENSDART00000159859.2 tmem132e-202

Description

transmembrane protein 132E [Source:NCBI gene (formerly Entrezgene);Acc:564044]

Location

Chromosome 5: 60,590,796-60,687,619 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 1503 variant alleles and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000090830.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130565.4	tmem132e-201	3795	1073aa	ENSDARP00000107971.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	L7VG99	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000159859.2	tmem132e-202	4872	741aa	ENSDARP00000134693.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000186310.1	tmem132e-203	3657	1027aa	ENSDARP00000147632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,872 bps, Translation length: 741 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000159859.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000159859.2 tmem132e-202

Summary

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Transcript: ENSDART00000159859.2 tmem132e-202

Summary

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