Transcript: ENSDART00000174182.2 slc1a2a-202

Description

solute carrier family 1 member 2a [Source:ZFIN;Acc:ZDB-GENE-100422-11]

Gene Synonyms

EAAT2b, SLC1A2b

Location

About this transcript

This transcript has 3 exons, is associated with 195 variant alleles and maps to 25 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000174315.2	slc1a2a-203	3709	548aa	ENSDARP00000143007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D7RVR8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164165.2	slc1a2a-201	1656	548aa	ENSDARP00000136807.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D7RVR8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174182.2	slc1a2a-202	394	38aa	ENSDARP00000143212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1L1QZT2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 394 bps, Translation length: 38 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000174182.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.