TBC1 domain family member 1 [Source:VGNC Symbol;Acc:VGNC:93758]
Primary_assembly 8: 29,370,481-29,590,571 forward strand.
Sscrofa11.1:CM000819.5
This gene has 9 transcripts (splice variants), 204 orthologues and 34 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000023939.3 | TBC1D1-204 | 4647 | 1259aa | ENSSSCP00000025735.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0YS66 I3LNR0 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000081837.2 | TBC1D1-207 | 4913 | 1187aa | ENSSSCP00000074210.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2RN68 | - |
| ENSSSCT00000046818.2 | TBC1D1-208 | 4847 | 1165aa | ENSSSCP00000052741.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B886 A0A8D0YNR0 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000041921.2 | TBC1D1-202 | 4825 | 1036aa | ENSSSCP00000035968.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A286ZWF1 A0A8D0YVF8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000009599.4 | TBC1D1-209 | 4736 | 1128aa | ENSSSCP00000009352.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0YNS1 F1S4K5 | - |
| ENSSSCT00000079286.1 | TBC1D1-205 | 4527 | 1219aa | ENSSSCP00000064129.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QPY7 A0A8D0YS73 | - |
| ENSSSCT00000090290.2 | TBC1D1-206 | 4485 | 1205aa | ENSSSCP00000072366.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R7P2 A0A8D0YT52 | - |
| ENSSSCT00000022915.4 | TBC1D1-203 | 3916 | 1130aa | ENSSSCP00000019456.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D0YNV2 I3L605 | - |
| ENSSSCT00000099011.1 | TBC1D1-201 | 3107 | 858aa | ENSSSCP00000075043.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8W4F702 | - |
