Transcript: MGP_C57BL6NJ_T0027568.1

Description

leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]

Gene Synonyms

FEX, Fex, Gpr49

Location

Chromosome 10: 122,270,739-122,416,071 reverse strand.

Reference strain equivalent

Lgr5

About this transcript

This transcript has 17 exons, is annotated with 57 domains and features and maps to 237 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0018135.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0027566.1	-	4714	907aa	MGP_C57BL6NJ_P0027566	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24180	G3UXI8 G3UXX4 Q9Z1P4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0027567.1	-	2652	883aa	MGP_C57BL6NJ_P0027567	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0027568.1	-	2508	835aa	MGP_C57BL6NJ_P0027568	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0027573.1	-	607	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0027571.1	-	4793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0027572.1	-	2781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0027569.1	-	631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0027570.1	-	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,508 bps, Translation length: 835 residues

Version

MGP_C57BL6NJ_T0027568.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0027568.1

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Transcript: MGP_C57BL6NJ_T0027568.1

Summary

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