Mouse (GRCm39)
Description

nuclear transcription factor, X-box binding-like 1 [Source:MGI Symbol;Acc:MGI:1923646]

Gene Synonyms

1700012H24Rik, D430033A06Rik, LOC381696, TCF9

Location
About this transcript

This transcript has 23 exons, is annotated with 44 domains and features, is associated with 2418 variant alleles and maps to 405 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000087216.12Nfxl1-2023712918aaENSMUSP00000084467.6
 
Protein coding
CCDS39109E9Q8I7 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENSMUST00000074948.5Nfxl1-2011373346aaENSMUSP00000074481.5
 
Protein coding
E9Q3K1 TSL:1CDS 3' incomplete
ENSMUST00000135318.8Nfxl1-2043579500aaENSMUSP00000114355.2
 
Nonsense mediated decay
E9PZN0 TSL:1
ENSMUST00000198977.2Nfxl1-2094172No protein-
 
Retained intron
-TSL:NA
ENSMUST00000149393.2Nfxl1-2071193No protein-
 
Retained intron
-TSL:1
ENSMUST00000134452.8Nfxl1-203884No protein-
 
Retained intron
-TSL:1
ENSMUST00000153882.2Nfxl1-208800No protein-
 
Retained intron
-TSL:3
ENSMUST00000146761.2Nfxl1-205798No protein-
 
Retained intron
-TSL:1
ENSMUST00000149340.2Nfxl1-206416No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 23, Coding exons: 22, Transcript length: 3,712 bps, Translation length: 918 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39109

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000087216.12

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.