Mouse (GRCm39)
Description

nuclear transcription factor, X-box binding-like 1 [Source:MGI Symbol;Acc:MGI:1923646]

Gene Synonyms

1700012H24Rik, D430033A06Rik, LOC381696, TCF9

Location
About this transcript

This transcript has 22 exons, is annotated with 1 domain and feature, is associated with 2417 variant alleles and maps to 391 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000087216.12Nfxl1-2023712918aaENSMUSP00000084467.6
 
Protein coding
CCDS39109E9Q8I7 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENSMUST00000074948.5Nfxl1-2011373346aaENSMUSP00000074481.5
 
Protein coding
E9Q3K1 TSL:1CDS 3' incomplete
ENSMUST00000135318.8Nfxl1-2043579500aaENSMUSP00000114355.2
 
Nonsense mediated decay
E9PZN0 TSL:1
ENSMUST00000198977.2Nfxl1-2094172No protein-
 
Retained intron
-TSL:NA
ENSMUST00000149393.2Nfxl1-2071193No protein-
 
Retained intron
-TSL:1
ENSMUST00000134452.8Nfxl1-203884No protein-
 
Retained intron
-TSL:1
ENSMUST00000153882.2Nfxl1-208800No protein-
 
Retained intron
-TSL:3
ENSMUST00000146761.2Nfxl1-205798No protein-
 
Retained intron
-TSL:1
ENSMUST00000149340.2Nfxl1-206416No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 22, Coding exons: 11, Transcript length: 3,579 bps, Translation length: 500 residues

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000135318.8

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.