Mouse (GRCm39)
Description

scaffold attachment factor B [Source:MGI Symbol;Acc:MGI:2146974]

Gene Synonyms

3110021E02Rik, 5330423C17Rik, SAFB1

Location
About this transcript

This transcript has 21 exons, is annotated with 38 domains and features, is associated with 1281 variant alleles and maps to 373 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000182533.8Safb-2073122939aaENSMUSP00000138277.2
 
Protein coding
S4R1M2 Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000095224.11Safb-2013106937aaENSMUSP00000092849.4
 
Protein coding
CCDS50152D3YXK2 GENCODE basicAPPRIS P4TSL:5
ENSMUST00000182800.8Safb-20834244aaENSMUSP00000138743.2
 
Protein coding
S4R2Q5 TSL:3CDS 3' incomplete
ENSMUST00000182951.8Safb-210774169aaENSMUSP00000138395.2
 
Nonsense mediated decay
S4R1W0 TSL:5CDS 5' incomplete
ENSMUST00000182378.8Safb-2043628No protein-
 
Retained intron
-TSL:1
ENSMUST00000182159.2Safb-2031998No protein-
 
Retained intron
-TSL:NA
ENSMUST00000182031.2Safb-2021755No protein-
 
Retained intron
-TSL:1
ENSMUST00000182454.2Safb-2051073No protein-
 
Retained intron
-TSL:NA
ENSMUST00000183041.8Safb-211714No protein-
 
Retained intron
-TSL:3
ENSMUST00000182461.2Safb-206703No protein-
 
Retained intron
-TSL:5
ENSMUST00000183318.2Safb-212423No protein-
 
Retained intron
-TSL:2
ENSMUST00000182913.2Safb-209420No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,122 bps, Translation length: 939 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000182533.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.