Mouse (GRCm39)
Description

cold shock domain containing E1, RNA binding [Source:MGI Symbol;Acc:MGI:92356]

Gene Synonyms

D3Jfr1, unr

About this transcript

This transcript has 19 exons, is annotated with 40 domains and features, is associated with 1861 variant alleles and maps to 419 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000029446.13Csde1-2014318798aaENSMUSP00000029446.9
 
Protein coding
CCDS38569Q3U1S6 Q91W50 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000199420.5Csde1-2154185767aaENSMUSP00000142703.2
 
Protein coding
CCDS79990Q8JZN2 GENCODE basicTSL:5
ENSMUST00000198180.5Csde1-2113849767aaENSMUSP00000142983.2
 
Protein coding
CCDS79990Q8JZN2 GENCODE basicTSL:1
ENSMUST00000197488.5Csde1-2063827767aaENSMUSP00000143524.2
 
Protein coding
CCDS79990Q8JZN2 GENCODE basicTSL:1
ENSMUST00000199240.5Csde1-2143457668aaENSMUSP00000143050.2
 
Protein coding
CCDS79991A0A0G2JF72 GENCODE basicTSL:1
ENSMUST00000199571.5Csde1-2163123767aaENSMUSP00000143028.2
 
Protein coding
CCDS79990Q8JZN2 GENCODE basicTSL:5
ENSMUST00000197827.5Csde1-2072671798aaENSMUSP00000143503.2
 
Protein coding
CCDS38569Q3U1S6 Q91W50 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000198174.2Csde1-2102584112aaENSMUSP00000142395.2
 
Nonsense mediated decay
A0A0G2JDJ7 TSL:1CDS 5' incomplete
ENSMUST00000195889.5Csde1-202733151aaENSMUSP00000142647.2
 
Nonsense mediated decay
A0A0G2JE62 TSL:5CDS 5' incomplete
ENSMUST00000198944.5Csde1-213814No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000197154.5Csde1-205604No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000198906.2Csde1-2124277No protein-
 
Retained intron
-TSL:1
ENSMUST00000196521.2Csde1-2031803No protein-
 
Retained intron
-TSL:NA
ENSMUST00000197844.2Csde1-208671No protein-
 
Retained intron
-TSL:1
ENSMUST00000200617.2Csde1-217612No protein-
 
Retained intron
-TSL:2
ENSMUST00000197939.2Csde1-209580No protein-
 
Retained intron
-TSL:2
ENSMUST00000196685.2Csde1-204506No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 19, Coding exons: 17, Transcript length: 3,849 bps, Translation length: 767 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS79990

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000198180.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.