Transcript: ENSMUST00000228645.2 Vmn1r211-202

Description

vomeronasal 1 receptor 211 [Source:MGI Symbol;Acc:MGI:2159685]

Gene Synonyms

V1rh20

Location

Chromosome 13: 23,031,596-23,041,731 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 20 domains and features, is associated with 717 variant alleles and maps to 70 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000063998.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000228645.2	Vmn1r211-202	5447	298aa	ENSMUSP00000154146.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26326	Q8R266	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000073728.5	Vmn1r211-201	985	298aa	ENSMUSP00000073405.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26326	Q8R266	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 5,447 bps, Translation length: 298 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26326

Version

ENSMUST00000228645.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported partial

upstream ATG

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000228645.2 Vmn1r211-202

Summary

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Transcript: ENSMUST00000228645.2 Vmn1r211-202

Summary

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