Mouse (GRCm39)
Description

pre-mRNA processing factor 40A [Source:MGI Symbol;Acc:MGI:1860512]

Gene Synonyms

2810012K09Rik, FBP11, Fnbp3

Location
About this transcript

This transcript has 12 exons, is annotated with 1 domain and feature, is associated with 2007 variant alleles and maps to 175 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000076313.14Prpf40a-2017374966aaENSMUSP00000075655.8
 
Protein coding
A0A6Q6PUT5 Ensembl CanonicalTSL:1CDS 5' incomplete
ENSMUST00000210789.3Prpf40a-2083773926aaENSMUSP00000147599.3
 
Protein coding
A0A1B0GRU8 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000239398.2Prpf40a-2113565953aaENSMUSP00000159339.2
 
Protein coding
CCDS16038Q9R1C7 GENCODE basic
ENSMUST00000209364.3Prpf40a-2063251926aaENSMUSP00000147671.2
 
Protein coding
A0A1B0GRU8 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000211712.3Prpf40a-2102227102aaENSMUSP00000147939.3
 
Nonsense mediated decay
A0A1B0GSH6 TSL:5
ENSMUST00000125243.3Prpf40a-2021425100aaENSMUSP00000117406.3
 
Nonsense mediated decay
A2AQW6 TSL:5CDS 5' incomplete
ENSMUST00000209508.3Prpf40a-2071290144aaENSMUSP00000147910.3
 
Nonsense mediated decay
A0A1B0GSF1 TSL:5
ENSMUST00000211102.2Prpf40a-209107484aaENSMUSP00000148161.2
 
Nonsense mediated decay
A0A1B0GT17 TSL:5CDS 5' incomplete
ENSMUST00000152922.8Prpf40a-2053065No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000132031.2Prpf40a-203665No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000133384.2Prpf40a-204597No protein-
 
Protein coding CDS not defined
-TSL:3
Statistics

Exons: 12, Coding exons: 4, Transcript length: 1,290 bps, Translation length: 144 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000209508.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]