Mouse (GRCm39)
Description

protocadherin 15 [Source:MGI Symbol;Acc:MGI:1891428]

Gene Synonyms

Gm9815, Ush1f, nmf19, roda

Location
About this transcript

This transcript has 35 exons, is annotated with 121 domains and features, is associated with 39754 variant alleles and maps to 348 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000193361.6Pcdh15-23678811943aaENSMUSP00000141792.2
 
Protein coding
CCDS35934Q99PJ1 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000191854.6Pcdh15-23391041677aaENSMUSP00000141973.2
 
Protein coding
CCDS56717Q99PJ1-19 GENCODE basicAPPRIS P4TSL:5
ENSMUST00000105424.10Pcdh15-20269321938aaENSMUSP00000101064.4
 
Protein coding
CCDS56715Q99PJ1-2 GENCODE basicTSL:5
ENSMUST00000131321.9Pcdh15-21469261936aaENSMUSP00000122911.3
 
Protein coding
CCDS56718Q99PJ1-4 GENCODE basicTSL:1
ENSMUST00000092420.13Pcdh15-20169171933aaENSMUSP00000090076.7
 
Protein coding
CCDS48594Q99PJ1-6 GENCODE basicTSL:1
ENSMUST00000126920.9Pcdh15-21068661916aaENSMUSP00000121939.3
 
Protein coding
CCDS56720Q99PJ1-8 GENCODE basicTSL:5
ENSMUST00000129404.9Pcdh15-21368571913aaENSMUSP00000117731.3
 
Protein coding
CCDS56721Q99PJ1-9 GENCODE basicTSL:5
ENSMUST00000147189.9Pcdh15-22168061896aaENSMUSP00000122940.3
 
Protein coding
CCDS48595Q99PJ1-7 GENCODE basicTSL:1
ENSMUST00000105426.10Pcdh15-20368021936aaENSMUSP00000101066.5
 
Protein coding
CCDS56718Q99PJ1-4 GENCODE basicTSL:5
ENSMUST00000105429.10Pcdh15-20467191867aaENSMUSP00000101069.4
 
Protein coding
CCDS56719Q99PJ1-5 GENCODE basicTSL:5
ENSMUST00000131724.9Pcdh15-21563221518aaENSMUSP00000122466.3
 
Protein coding
CCDS56716Q99PJ1-11 GENCODE basicTSL:5
ENSMUST00000151116.9Pcdh15-22562871790aaENSMUSP00000119662.3
 
Protein coding
CCDS56711Q99PJ1-10 GENCODE basicTSL:5
ENSMUST00000193174.6Pcdh15-23559361783aaENSMUSP00000142238.2
 
Protein coding
A0A0A6YY17 GENCODE basicTSL:5
ENSMUST00000149977.9Pcdh15-22458431675aaENSMUSP00000118833.4
 
Protein coding
A0A140T8S2 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000177107.8Pcdh15-23056961682aaENSMUSP00000135501.2
 
Protein coding
CCDS56713Q99PJ1-18 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000191709.6Pcdh15-23253461781aaENSMUSP00000142313.2
 
Protein coding
Q99PJ1-25 GENCODE basicTSL:5
ENSMUST00000124046.8Pcdh15-20653361129aaENSMUSP00000121130.2
 
Protein coding
Q99PJ1-12 GENCODE basicTSL:5
ENSMUST00000195531.6Pcdh15-24052411714aaENSMUSP00000141920.2
 
Protein coding
A0A0A6YXB5 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000193739.6Pcdh15-23750341677aaENSMUSP00000142173.2
 
Protein coding
Q99PJ1-26 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000177420.7Pcdh15-23148781176aaENSMUSP00000135849.2
 
Protein coding
CCDS56712Q99PJ1-21 GENCODE basicTSL:1
ENSMUST00000125006.9Pcdh15-20748631171aaENSMUSP00000120056.3
 
Protein coding
CCDS56714Q99PJ1-22 GENCODE basicTSL:1
ENSMUST00000194315.2Pcdh15-23847151333aaENSMUSP00000141594.2
 
Protein coding
A0A0A6YWL3 TSL:5CDS 5' incomplete
ENSMUST00000152655.9Pcdh15-2263860981aaENSMUSP00000118201.3
 
Protein coding
Q99PJ1-17 GENCODE basicTSL:1
ENSMUST00000134009.9Pcdh15-2163300650aaENSMUSP00000120618.3
 
Protein coding
Q99PJ1-23 GENCODE basicTSL:1
ENSMUST00000125517.9Pcdh15-2093074719aaENSMUSP00000115399.3
 
Protein coding
Q99PJ1-16 GENCODE basicTSL:1
ENSMUST00000152819.9Pcdh15-2272867650aaENSMUSP00000123647.3
 
Protein coding
Q99PJ1-15 GENCODE basicTSL:1
ENSMUST00000155701.9Pcdh15-2282754334aaENSMUSP00000135495.2
 
Protein coding
Q99PJ1-14 GENCODE basicTSL:1
ENSMUST00000146682.8Pcdh15-2201891415aaENSMUSP00000134863.2
 
Protein coding
Q99PJ1-20 GENCODE basicTSL:1
ENSMUST00000125055.9Pcdh15-2086852684aaENSMUSP00000114326.3
 
Nonsense mediated decay
Q99PJ1-3 TSL:5
ENSMUST00000136096.9Pcdh15-2176846684aaENSMUSP00000121534.3
 
Nonsense mediated decay
Q99PJ1-3 TSL:2
ENSMUST00000144302.9Pcdh15-2193315326aaENSMUSP00000122606.3
 
Nonsense mediated decay
Q99PJ1-13 TSL:2
ENSMUST00000127928.7Pcdh15-2113404No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000147455.2Pcdh15-2222841No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000192370.2Pcdh15-234556No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000194729.2Pcdh15-2395272No protein-
 
Retained intron
-TSL:NA
ENSMUST00000148572.2Pcdh15-2232712No protein-
 
Retained intron
-TSL:1
ENSMUST00000123398.9Pcdh15-2052436No protein-
 
Retained intron
-TSL:1
ENSMUST00000156999.2Pcdh15-2291024No protein-
 
Retained intron
-TSL:1
ENSMUST00000128843.2Pcdh15-212691No protein-
 
Retained intron
-TSL:5
ENSMUST00000139106.3Pcdh15-218462No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 35, Coding exons: 34, Transcript length: 7,881 bps, Translation length: 1,943 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99PJ1

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35934

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000193361.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.