Mouse (GRCm39)
Description

CAP-GLY domain containing linker protein 1 [Source:MGI Symbol;Acc:MGI:1928401]

Gene Synonyms

1110007I12Rik, 4631429H07Rik, CLIP-170, Clip 170, Clip50, Rsn, cytoplasmic linker protein 50, restin

About this transcript

This transcript has 24 exons, is annotated with 50 domains and features, is associated with 6538 variant alleles and maps to 447 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000031382.14Clip1-20143871437aaENSMUSP00000031382.8
 
Protein coding
F8WIA1 Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000111566.9Clip1-20561331391aaENSMUSP00000107192.3
 
Protein coding
CCDS19667Q922J3 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000111561.8Clip1-20358831426aaENSMUSP00000107186.2
 
Protein coding
D3Z2Z1 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000111564.8Clip1-20456091315aaENSMUSP00000107190.2
 
Protein coding
CCDS71663Q922J3-2 GENCODE basicTSL:1
ENSMUST00000137363.8Clip1-20846701066aaENSMUSP00000121425.2
 
Protein coding
F6RCU2 TSL:5CDS 5' incomplete
ENSMUST00000063905.12Clip1-20245891320aaENSMUSP00000068241.6
 
Protein coding
CCDS84958D3Z3M7 GENCODE basicTSL:5
ENSMUST00000154672.2Clip1-21335441182aaENSMUSP00000122064.2
 
Protein coding
F7CB97 TSL:5CDS 5' and 3' incomplete
ENSMUST00000149410.2Clip1-2112669840aaENSMUSP00000115965.2
 
Protein coding
Q8C0S5 TSL:1CDS 3' incomplete
ENSMUST00000144121.2Clip1-2102880172aaENSMUSP00000119641.2
 
Nonsense mediated decay
F6RAY2 TSL:5CDS 5' incomplete
ENSMUST00000198833.2Clip1-214596No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000199018.2Clip1-2152692No protein-
 
Retained intron
-TSL:NA
ENSMUST00000125340.8Clip1-2062394No protein-
 
Retained intron
-TSL:2
ENSMUST00000137602.8Clip1-2091505No protein-
 
Retained intron
-TSL:5
ENSMUST00000154432.2Clip1-212898No protein-
 
Retained intron
-TSL:2
ENSMUST00000133545.8Clip1-207694No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 24, Coding exons: 23, Transcript length: 6,133 bps, Translation length: 1,391 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q922J3

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19667

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000111566.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.