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EnsemblEnsembl Home
Description

serrate, RNA effector molecule [Source:HGNC Symbol;Acc:HGNC:24101]

Gene Synonyms

ARS2, Asr2, serrate

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SRRT-213ENST00000611405.52990876aaENSP00000480421.1
 
Protein coding
CCDS34709Q9BXP5-1 NM_015908.6MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
SRRT-215ENST00000614484.42964875aaENSP00000481173.1
 
Protein coding
CCDS47666Q9BXP5-3 -GENCODE basicAPPRIS ALT2TSL:1
SRRT-216ENST00000618262.42955872aaENSP00000478341.1
 
Protein coding
CCDS47665Q9BXP5-2 -GENCODE basicAPPRIS ALT2TSL:1
SRRT-217ENST00000618411.42893871aaENSP00000483556.1
 
Protein coding
CCDS47667Q9BXP5-4 -GENCODE basicAPPRIS ALT2TSL:1
SRRT-204ENST00000448764.51607499aaENSP00000410588.1
 
Protein coding
-H7C3A1 -TSL:5CDS 5' incomplete
SRRT-202ENST00000431645.1397112aaENSP00000400912.1
 
Protein coding
-C9JUL9 -TSL:2CDS 3' incomplete
SRRT-203ENST00000445337.1446148aaENSP00000398618.1
 
Non stop decay
-A0A0A0MSP6 -TSL:3CDS 5' incomplete
SRRT-219ENST00000641476.199263aaENSP00000492916.1
 
Nonsense mediated decay
-A0A286YEP7 -CDS 5' incomplete
SRRT-201ENST00000423692.572777aaENSP00000396807.1
 
Nonsense mediated decay
-H7C0U8 -TSL:5CDS 5' incomplete
SRRT-214ENST00000614370.455650aaENSP00000483348.1
 
Nonsense mediated decay
-A0A087X0F4 -TSL:2
SRRT-205ENST00000449389.144847aaENSP00000400703.1
 
Nonsense mediated decay
-H7C1K0 -TSL:3CDS 5' incomplete
SRRT-209ENST00000474896.1726No protein-
 
Retained intron
---TSL:3
SRRT-211ENST00000478693.1655No protein-
 
Retained intron
---TSL:2
SRRT-218ENST00000620394.1582No protein-
 
Retained intron
---TSL:2
SRRT-206ENST00000460194.1575No protein-
 
Retained intron
---TSL:2
SRRT-212ENST00000487311.1563No protein-
 
Retained intron
---TSL:2
SRRT-210ENST00000477529.1540No protein-
 
Retained intron
---TSL:2
SRRT-207ENST00000466432.1378No protein-
 
Retained intron
---TSL:2
SRRT-208ENST00000469602.1376No protein-
 
Retained intron
---TSL:2
Description

BAF chromatin remodeling complex subunit BCL11A [Source:HGNC Symbol;Acc:HGNC:13221]

Gene Synonyms

BCL11A-L, BCL11A-S, BCL11A-XL, CTIP1, EVI9, HBFQTL5, ZNF856

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
BCL11A-213ENST00000642384.26102835aaENSP00000496168.1
 
Protein coding
CCDS1862Q9H165-1 NM_022893.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4
BCL11A-202ENST00000356842.94052773aaENSP00000349300.4
 
Protein coding
CCDS1861Q9H165-2 -GENCODE basicTSL:1
BCL11A-203ENST00000358510.62664793aaENSP00000351307.5
 
Protein coding
CCDS86845A0A2U3TZJ5 -GENCODE basicTSL:1
BCL11A-204ENST00000359629.102494243aaENSP00000352648.5
 
Protein coding
CCDS46295Q9H165-3 -GENCODE basicTSL:1
BCL11A-212ENST00000642180.16003161aaENSP00000493887.1
 
Protein coding
-A0A2R8YCR5 -CDS 5' incomplete
BCL11A-201ENST00000335712.115519801aaENSP00000338774.7
 
Protein coding
-Q9H165-6 -GENCODE basicAPPRIS ALT1TSL:1
BCL11A-219ENST00000643716.14874130aaENSP00000494397.1
 
Protein coding
-A0A2R8YEK1 -GENCODE basic
BCL11A-224ENST00000646249.13388209aaENSP00000495759.1
 
Protein coding
-A0A2R8Y2E8 -GENCODE basic
BCL11A-209ENST00000489516.71519241aaENSP00000488390.2
 
Protein coding
-A0A0J9YXG2 -GENCODE basicTSL:5
BCL11A-216ENST00000643004.11379130aaENSP00000496736.1
 
Protein coding
-A0A2R8YHH4 -GENCODE basic
BCL11A-214ENST00000642439.11325209aaENSP00000493484.1
 
Protein coding
-A0A2R8Y2E8 -GENCODE basic
BCL11A-218ENST00000643459.1993331aaENSP00000494996.1
 
Protein coding
-A0A2R8YDW6 -CDS 5' and 3' incomplete
BCL11A-217ENST00000643222.1866204aaENSP00000495862.1
 
Protein coding
-A0A2R8Y7B0 -CDS 5' incomplete
BCL11A-205ENST00000409351.5758142aaENSP00000487844.1
 
Protein coding
-Q9H165-8 -GENCODE basicTSL:1
BCL11A-207ENST00000479026.256417aaENSP00000488636.1
 
Protein coding
-A0A0J9YY13 -TSL:4CDS 5' incomplete
BCL11A-208ENST00000489183.137294aaENSP00000494014.1
 
Protein coding
-A0A2R8YDS7 -TSL:3CDS 5' incomplete
BCL11A-226ENST00000647469.136997aaENSP00000496304.1
 
Protein coding
-A0A2R8YGT9 -CDS 5' incomplete
BCL11A-211ENST00000631857.12316167aaENSP00000488886.1
 
Nonsense mediated decay
-A0A0J9YYJ9 -TSL:2
BCL11A-227ENST00000647472.11329102aaENSP00000496588.1
 
Nonsense mediated decay
-A0A2R8Y7W4 -CDS 5' incomplete
BCL11A-206ENST00000477659.12775No protein-
 
Processed transcript
---TSL:2
BCL11A-215ENST00000642824.1726No protein-
 
Processed transcript
----
BCL11A-222ENST00000645405.1634No protein-
 
Processed transcript
----
BCL11A-210ENST00000492272.6619No protein-
 
Processed transcript
---TSL:2
BCL11A-225ENST00000647038.1522No protein-
 
Processed transcript
----
BCL11A-221ENST00000645224.13727No protein-
 
Retained intron
----
BCL11A-223ENST00000645455.1819No protein-
 
Retained intron
----
BCL11A-220ENST00000644606.1518No protein-
 
Retained intron
----
Description

transforming growth factor beta 1 induced transcript 1 [Source:HGNC Symbol;Acc:HGNC:11767]

Gene Synonyms

ARA55, Hic-5, TSC-5

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
TGFB1I1-203ENST00000394863.81805461aaENSP00000378332.3
 
Protein coding
CCDS42156O43294-1 NM_001042454.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
TGFB1I1-202ENST00000394858.61803444aaENSP00000378327.2
 
Protein coding
CCDS10713O43294-2 -GENCODE basicAPPRIS ALT2TSL:1
TGFB1I1-201ENST00000361773.71773444aaENSP00000355117.3
 
Protein coding
CCDS10713O43294-2 -GENCODE basicAPPRIS ALT2TSL:1
TGFB1I1-214ENST00000567607.51770444aaENSP00000457586.1
 
Protein coding
CCDS10713O43294-2 -GENCODE basicAPPRIS ALT2TSL:1
TGFB1I1-210ENST00000565360.5684216aaENSP00000455709.1
 
Protein coding
-H3BQC4 -TSL:3CDS 3' incomplete
TGFB1I1-206ENST00000562566.566889aaENSP00000456482.1
 
Protein coding
-H3BS04 -TSL:4CDS 3' incomplete
TGFB1I1-211ENST00000565454.5573165aaENSP00000456783.1
 
Protein coding
-H3BSN4 -TSL:4CDS 3' incomplete
TGFB1I1-209ENST00000564804.11616114aaENSP00000454688.1
 
Nonsense mediated decay
-H3BN49 -TSL:5
TGFB1I1-212ENST00000567066.6145352aaENSP00000456341.2
 
Nonsense mediated decay
-H3BRP2 -TSL:5
TGFB1I1-207ENST00000563712.6130261aaENSP00000459283.1
 
Nonsense mediated decay
-I3L209 -TSL:5
TGFB1I1-208ENST00000564176.54973No protein-
 
Retained intron
---TSL:2
TGFB1I1-215ENST00000568142.22458No protein-
 
Retained intron
---TSL:5
TGFB1I1-217ENST00000569703.51005No protein-
 
Retained intron
---TSL:2
TGFB1I1-204ENST00000561785.5577No protein-
 
Retained intron
---TSL:4
TGFB1I1-216ENST00000569254.5570No protein-
 
Retained intron
---TSL:4
TGFB1I1-213ENST00000567524.1560No protein-
 
Retained intron
---TSL:4
TGFB1I1-205ENST00000562165.5466No protein-
 
Retained intron
---TSL:4
Description

potassium voltage-gated channel subfamily Q member 2 [Source:HGNC Symbol;Acc:HGNC:6296]

Gene Synonyms

BFNC, EBN, EBN1, ENB1, HNSPC, KCNA11, Kv7.2

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
KCNQ2-204ENST00000359125.79247872aaENSP00000352035.2
 
Protein coding
CCDS13520O43526-1 NM_172107.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
KCNQ2-213ENST00000626839.29213854aaENSP00000486706.1
 
Protein coding
CCDS13519O43526-2 -GENCODE basicAPPRIS P4TSL:1
KCNQ2-205ENST00000360480.72775844aaENSP00000353668.3
 
Protein coding
CCDS13518O43526-3 -GENCODE basicAPPRIS ALT1TSL:5
KCNQ2-202ENST00000344462.82750841aaENSP00000339611.4
 
Protein coding
CCDS46629O43526-4 -GENCODE basicTSL:1
KCNQ2-201ENST00000344425.81441393aaENSP00000345523.5
 
Protein coding
CCDS13521O43526-6 -GENCODE basicTSL:1
KCNQ2-207ENST00000370224.53004766aaENSP00000359244.2
 
Protein coding
-Q4VXP6 -GENCODE basicTSL:5
KCNQ2-236ENST00000637193.12983671aaENSP00000490734.1
 
Protein coding
-A0A1B0GW14 -GENCODE basicTSL:5
KCNQ2-209ENST00000625514.22925754aaENSP00000486040.1
 
Protein coding
-A0A0D9SEV1 -GENCODE basicTSL:5
KCNQ2-215ENST00000629241.22853730aaENSP00000487142.1
 
Protein coding
-A0A0D9SG49 -GENCODE basicTSL:5
KCNQ2-203ENST00000357249.62594728aaENSP00000349789.3
 
Protein coding
-A0A0G2JH35 -TSL:5CDS 5' incomplete
KCNQ2-218ENST00000629676.22399645aaENSP00000486194.1
 
Protein coding
-A0A0D9SF10 -GENCODE basicTSL:5
KCNQ2-211ENST00000626684.1804192aaENSP00000487563.1
 
Protein coding
-A0A0D9SGJ7 -TSL:3CDS 5' incomplete
KCNQ2-217ENST00000629498.2716153aaENSP00000486509.1
 
Protein coding
-A0A0D9SFE0 -TSL:5CDS 5' incomplete
KCNQ2-214ENST00000627221.2688229aaENSP00000487469.1
 
Protein coding
-A0A0D9SGG3 -TSL:5CDS 5' and 3' incomplete
KCNQ2-216ENST00000629318.1545179aaENSP00000487384.1
 
Protein coding
-A0A0D9SGD4 -TSL:4CDS 5' incomplete
KCNQ2-227ENST00000636614.115150aaENSP00000490142.1
 
Protein coding
-A0A1B0GUK1 -TSL:5CDS 5' and 3' incomplete
KCNQ2-224ENST00000636255.1984No protein-
 
Processed transcript
---TSL:5
KCNQ2-208ENST00000482957.1600No protein-
 
Processed transcript
---TSL:5
KCNQ2-210ENST00000626313.1540No protein-
 
Processed transcript
---TSL:5
KCNQ2-212ENST00000626717.1268No protein-
 
Processed transcript
---TSL:4
KCNQ2-230ENST00000636846.1176No protein-
 
Processed transcript
---TSL:5
KCNQ2-247ENST00000638073.1164No protein-
 
Processed transcript
---TSL:5
KCNQ2-245ENST00000637803.1160No protein-
 
Processed transcript
---TSL:5
KCNQ2-232ENST00000636873.1159No protein-
 
Processed transcript
---TSL:5
KCNQ2-235ENST00000637133.1148No protein-
 
Processed transcript
---TSL:5
KCNQ2-223ENST00000636065.1145No protein-
 
Processed transcript
---TSL:5
KCNQ2-228ENST00000636623.1119No protein-
 
Processed transcript
---TSL:5
KCNQ2-233ENST00000636959.1113No protein-
 
Processed transcript
---TSL:5
KCNQ2-240ENST00000637632.1108No protein-
 
Processed transcript
---TSL:5
KCNQ2-222ENST00000636042.1103No protein-
 
Processed transcript
---TSL:5
KCNQ2-237ENST00000637338.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-234ENST00000637063.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-242ENST00000637656.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-225ENST00000636499.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-239ENST00000637584.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-221ENST00000635867.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-229ENST00000636638.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-246ENST00000637890.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-220ENST00000635864.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-231ENST00000636858.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-243ENST00000637704.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-244ENST00000637772.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-226ENST00000636591.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-241ENST00000637639.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-238ENST00000637573.1100No protein-
 
Processed transcript
---TSL:5
KCNQ2-206ENST00000370221.31616No protein-
 
Retained intron
---TSL:2
KCNQ2-219ENST00000630274.2784No protein-
 
Retained intron
---TSL:3
Description

major facilitator superfamily domain containing 8 [Source:HGNC Symbol;Acc:HGNC:28486]

Gene Synonyms

CLN7, MGC33302

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
MFSD8-241ENST00000641686.24422518aaENSP00000493218.2
 
Protein coding
CCDS3736Q8NHS3-1 NM_001371596.2MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1
MFSD8-201ENST00000296468.84516518aaENSP00000296468.3
 
Protein coding
CCDS3736Q8NHS3-1 -GENCODE basicAPPRIS P1TSL:1
MFSD8-242ENST00000641690.14199451aaENSP00000492966.1
 
Protein coding
CCDS87259A0A286YEW8 -GENCODE basic
MFSD8-236ENST00000641509.14050413aaENSP00000493459.1
 
Protein coding
CCDS87255A0A286YFF1 -GENCODE basic
MFSD8-233ENST00000641482.14860336aaENSP00000493277.1
 
Protein coding
-A0A286YF73 -GENCODE basic
MFSD8-218ENST00000641186.14448480aaENSP00000493347.1
 
Protein coding
-A0A286YFI8 -GENCODE basic
MFSD8-217ENST00000641178.14374473aaENSP00000492989.1
 
Protein coding
-A0A286YF45 -GENCODE basic
MFSD8-227ENST00000641393.14069368aaENSP00000493197.1
 
Protein coding
-A0A286YFB5 -GENCODE basic
MFSD8-216ENST00000641147.14009368aaENSP00000493133.1
 
Protein coding
-A0A286YFB5 -GENCODE basic
MFSD8-219ENST00000641228.12559269aaENSP00000493194.1
 
Protein coding
-A0A286YFM2 -GENCODE basic
MFSD8-239ENST00000641590.12479298aaENSP00000493132.1
 
Protein coding
-A0A286YF72 -GENCODE basic
MFSD8-259ENST00000642042.12303455aaENSP00000493260.1
 
Protein coding
-A0A286YFF5 -GENCODE basic
MFSD8-207ENST00000513559.61813424aaENSP00000425000.2
 
Protein coding
-E7ERQ4 -GENCODE basicTSL:2
MFSD8-256ENST00000641949.11640254aaENSP00000492891.1
 
Protein coding
-A0A286YEV4 -GENCODE basic
MFSD8-243ENST00000641695.11455237aaENSP00000493134.1
 
Protein coding
-A0A286YFE7 -GENCODE basic
MFSD8-220ENST00000641243.11422229aaENSP00000493083.1
 
Protein coding
-A0A286YFC6 -GENCODE basic
MFSD8-213ENST00000641134.11327184aaENSP00000492925.1
 
Protein coding
-B7Z2B2 -GENCODE basic
MFSD8-234ENST00000641503.11082250aaENSP00000493304.1
 
Protein coding
-A0A286YFH3 -GENCODE basic
MFSD8-245ENST00000641743.1948288aaENSP00000493130.1
 
Protein coding
-A0A286YF51 -GENCODE basic
MFSD8-237ENST00000641538.1747249aaENSP00000492993.1
 
Protein coding
-A0A286YEV9 -CDS 5' and 3' incomplete
MFSD8-225ENST00000641369.1641164aaENSP00000493037.1
 
Protein coding
-A0A286YEW6 -CDS 3' incomplete
MFSD8-250ENST00000641830.1639115aaENSP00000493002.1
 
Protein coding
-A0A286YEW2 -CDS 5' incomplete
MFSD8-231ENST00000641447.1566145aaENSP00000493448.1
 
Protein coding
-A0A286YFE6 -CDS 3' incomplete
MFSD8-238ENST00000641558.1526127aaENSP00000493335.1
 
Protein coding
-A0A286YF93 -CDS 3' incomplete
MFSD8-230ENST00000641434.13209518aaENSP00000493279.1
 
Nonsense mediated decay
CCDS3736Q8NHS3-1 --
MFSD8-246ENST00000641748.13201518aaENSP00000493330.1
 
Nonsense mediated decay
CCDS3736Q8NHS3-1 --
MFSD8-212ENST00000641133.15109268aaENSP00000493192.1
 
Nonsense mediated decay
-A0A286YF00 --
MFSD8-235ENST00000641508.14321236aaENSP00000493209.1
 
Nonsense mediated decay
-A0A286YFH9 --
MFSD8-210ENST00000641025.14261336aaENSP00000493346.1
 
Nonsense mediated decay
-A0A286YF73 --
MFSD8-248ENST00000641774.14247198aaENSP00000492960.1
 
Nonsense mediated decay
-A0A286YEW7 --
MFSD8-232ENST00000641464.14197153aaENSP00000493438.1
 
Nonsense mediated decay
-Q8NHS3-2 --
MFSD8-258ENST00000642034.14132298aaENSP00000493285.1
 
Nonsense mediated decay
-A0A286YF72 --
MFSD8-255ENST00000641928.14083153aaENSP00000493418.1
 
Nonsense mediated decay
-Q8NHS3-2 --
MFSD8-211ENST00000641092.14054269aaENSP00000493392.1
 
Nonsense mediated decay
-A0A286YFM2 --
MFSD8-228ENST00000641397.13925231aaENSP00000493406.1
 
Nonsense mediated decay
-A0A286YFK4 --
MFSD8-208ENST00000515130.63314291aaENSP00000493056.1
 
Nonsense mediated decay
-A0A286YEX1 -TSL:5
MFSD8-247ENST00000641753.13007461aaENSP00000493240.1
 
Nonsense mediated decay
-A0A286YFI9 -CDS 5' incomplete
MFSD8-222ENST00000641332.12759229aaENSP00000493397.1
 
Nonsense mediated decay
-A0A286YFC6 --
MFSD8-253ENST00000641870.12109229aaENSP00000493044.1
 
Nonsense mediated decay
-A0A286YFC6 --
MFSD8-223ENST00000641340.12098236aaENSP00000493191.1
 
Nonsense mediated decay
-A0A286YFH9 --
MFSD8-244ENST00000641742.11823229aaENSP00000493315.1
 
Nonsense mediated decay
-A0A286YFC6 --
MFSD8-254ENST00000641882.11792191aaENSP00000493301.1
 
Nonsense mediated decay
-A0A286YF82 --
MFSD8-260ENST00000642078.11747184aaENSP00000492885.1
 
Nonsense mediated decay
-B7Z2B2 --
MFSD8-240ENST00000641658.11731184aaENSP00000492987.1
 
Nonsense mediated decay
-B7Z2B2 --
MFSD8-206ENST00000509826.21720236aaENSP00000421176.2
 
Nonsense mediated decay
-A0A286YFH9 -TSL:2
MFSD8-251ENST00000641843.11596146aaENSP00000493174.1
 
Nonsense mediated decay
-A0A286YFG7 --
MFSD8-252ENST00000641869.1107646aaENSP00000493423.1
 
Nonsense mediated decay
-A0A286YFM7 -CDS 5' incomplete
MFSD8-229ENST00000641413.185413aaENSP00000493141.1
 
Nonsense mediated decay
-A0A286YEY8 -CDS 5' incomplete
MFSD8-221ENST00000641264.178852aaENSP00000492908.1
 
Nonsense mediated decay
-A0A286YER2 --
MFSD8-249ENST00000641776.167368aaENSP00000493261.1
 
Nonsense mediated decay
-A0A286YFJ5 --
MFSD8-204ENST00000505284.61724No protein-
 
Processed transcript
---TSL:2
MFSD8-226ENST00000641388.1778No protein-
 
Processed transcript
----
MFSD8-202ENST00000503928.2728No protein-
 
Processed transcript
---TSL:1
MFSD8-224ENST00000641356.1493No protein-
 
Processed transcript
----
MFSD8-261ENST00000642121.1220No protein-
 
Processed transcript
----
MFSD8-215ENST00000641146.14780No protein-
 
Retained intron
----
MFSD8-257ENST00000642012.11711No protein-
 
Retained intron
----
MFSD8-262ENST00000642143.1920No protein-
 
Retained intron
----
MFSD8-214ENST00000641140.1886No protein-
 
Retained intron
----
MFSD8-205ENST00000508441.2787No protein-
 
Retained intron
---TSL:3
MFSD8-203ENST00000504126.1545No protein-
 
Retained intron
---TSL:4
MFSD8-209ENST00000641003.1398No protein-
 
Retained intron
----
Description

DEAD-box helicase 23 [Source:HGNC Symbol;Acc:HGNC:17347]

Gene Synonyms

PRPF28, SNRNP100, U5-100K, prp28

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
DDX23-201ENST00000308025.83256820aaENSP00000310723.2
 
Protein coding
CCDS8770Q9BUQ8-1 NM_004818.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
DDX23-207ENST00000550834.1869259aaENSP00000449657.1
 
Protein coding
-H0YIL9 -TSL:5CDS 5' incomplete
DDX23-214ENST00000552512.5696182aaENSP00000449639.1
 
Protein coding
-F8VVA2 -TSL:4CDS 3' incomplete
DDX23-211ENST00000551468.1567138aaENSP00000446948.1
 
Protein coding
-F8W1J5 -TSL:5CDS 3' incomplete
DDX23-202ENST00000547135.51377108aaENSP00000446770.1
 
Nonsense mediated decay
-Q9BUQ8-2 -TSL:2
DDX23-216ENST00000552802.5926152aaENSP00000448542.1
 
Nonsense mediated decay
-H0YI52 -TSL:5CDS 5' incomplete
DDX23-218ENST00000553182.5779No protein-
 
Processed transcript
---TSL:3
DDX23-213ENST00000552369.5603No protein-
 
Processed transcript
---TSL:4
DDX23-215ENST00000552555.1562No protein-
 
Processed transcript
---TSL:4
DDX23-208ENST00000551098.51083No protein-
 
Retained intron
---TSL:2
DDX23-203ENST00000547165.5958No protein-
 
Retained intron
---TSL:5
DDX23-204ENST00000547290.1750No protein-
 
Retained intron
---TSL:2
DDX23-210ENST00000551331.1706No protein-
 
Retained intron
---TSL:2
DDX23-212ENST00000552069.1592No protein-
 
Retained intron
---TSL:3
DDX23-209ENST00000551189.1587No protein-
 
Retained intron
---TSL:4
DDX23-206ENST00000549795.5579No protein-
 
Retained intron
---TSL:2
DDX23-205ENST00000547842.1554No protein-
 
Retained intron
---TSL:4
DDX23-217ENST00000553065.1336No protein-
 
Retained intron
---TSL:2
Description

ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:23364]

Gene Synonyms

SIAT7F, ST6GALNACVI

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ST6GALNAC6-205ENST00000373146.62410333aaENSP00000362239.1
 
Protein coding
CCDS6882Q969X2-1 NM_013443.5MANE Select v0.93Ensembl CanonicalGENCODE basicTSL:1
ST6GALNAC6-203ENST00000373142.52448374aaENSP00000362235.1
 
Protein coding
CCDS69669Q969X2-3 -GENCODE basicTSL:1
ST6GALNAC6-202ENST00000373141.52424299aaENSP00000362234.1
 
Protein coding
CCDS69668Q969X2-2 -GENCODE basicAPPRIS P1TSL:2
ST6GALNAC6-204ENST00000373144.72406299aaENSP00000362237.3
 
Protein coding
CCDS69668Q969X2-2 -GENCODE basicAPPRIS P1TSL:1
ST6GALNAC6-214ENST00000622357.52378299aaENSP00000477575.1
 
Protein coding
CCDS69668Q969X2-2 -APPRIS P1TSL:1
ST6GALNAC6-213ENST00000542456.5201886aaENSP00000438109.2
 
Protein coding
CCDS75908F6SGE3 -GENCODE basicTSL:2
ST6GALNAC6-201ENST00000291839.102357235aaENSP00000291839.6
 
Protein coding
-Q969X2-1 -GENCODE basicTSL:1
ST6GALNAC6-208ENST00000480417.5777No protein-
 
Processed transcript
---TSL:2
ST6GALNAC6-211ENST00000494541.5712No protein-
 
Processed transcript
---TSL:3
ST6GALNAC6-206ENST00000463086.5505No protein-
 
Processed transcript
---TSL:5
ST6GALNAC6-212ENST00000494611.1474No protein-
 
Processed transcript
---TSL:5
ST6GALNAC6-209ENST00000481355.5466No protein-
 
Processed transcript
---TSL:3
ST6GALNAC6-207ENST00000478319.5452No protein-
 
Processed transcript
---TSL:5
ST6GALNAC6-210ENST00000483353.22310No protein-
 
Retained intron
---TSL:NA
Description

long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]

Gene Synonyms

onco-lncRNA-12

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
LINC00511-279ENST00000650033.13766No protein-
 
Retained intron
---
LINC00511-278ENST00000650016.1508No protein-
 
Retained intron
---
LINC00511-244ENST00000648631.12929No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
LINC00511-220ENST00000647652.13700No protein-
 
lncRNA
--GENCODE basic
LINC00511-215ENST00000582712.22586No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-221ENST00000647706.22532No protein-
 
lncRNA
---
LINC00511-261ENST00000649350.12527No protein-
 
lncRNA
---
LINC00511-243ENST00000648623.22522No protein-
 
lncRNA
---
LINC00511-225ENST00000647953.12292No protein-
 
lncRNA
--GENCODE basic
LINC00511-283ENST00000650131.22282No protein-
 
lncRNA
---
LINC00511-213ENST00000581549.22266No protein-
 
lncRNA
--GENCODE basicTSL:2
LINC00511-235ENST00000648401.12214No protein-
 
lncRNA
--GENCODE basic
LINC00511-274ENST00000649793.22208No protein-
 
lncRNA
---
LINC00511-280ENST00000650051.12207No protein-
 
lncRNA
---
LINC00511-289ENST00000650212.12174No protein-
 
lncRNA
--GENCODE basic
LINC00511-276ENST00000649881.12078No protein-
 
lncRNA
---
LINC00511-294ENST00000650371.12061No protein-
 
lncRNA
---
LINC00511-272ENST00000649647.12060No protein-
 
lncRNA
---
LINC00511-302ENST00000650550.22041No protein-
 
lncRNA
--GENCODE basic
LINC00511-262ENST00000649366.12028No protein-
 
lncRNA
---
LINC00511-292ENST00000650313.11995No protein-
 
lncRNA
--GENCODE basic
LINC00511-255ENST00000649250.11978No protein-
 
lncRNA
---
LINC00511-224ENST00000647871.21958No protein-
 
lncRNA
--GENCODE basic
LINC00511-252ENST00000649074.11905No protein-
 
lncRNA
--GENCODE basic
LINC00511-249ENST00000648952.11893No protein-
 
lncRNA
---
LINC00511-299ENST00000650483.11888No protein-
 
lncRNA
---
LINC00511-240ENST00000648520.11888No protein-
 
lncRNA
--GENCODE basic
LINC00511-237ENST00000648411.11843No protein-
 
lncRNA
--GENCODE basic
LINC00511-264ENST00000649433.11836No protein-
 
lncRNA
--GENCODE basic
LINC00511-234ENST00000648297.11823No protein-
 
lncRNA
---
LINC00511-257ENST00000649311.11815No protein-
 
lncRNA
---
LINC00511-253ENST00000649172.11788No protein-
 
lncRNA
---
LINC00511-216ENST00000583460.21778No protein-
 
lncRNA
--GENCODE basicTSL:5
LINC00511-275ENST00000649833.11772No protein-
 
lncRNA
---
LINC00511-245ENST00000648667.11751No protein-
 
lncRNA
--GENCODE basic
LINC00511-273ENST00000649733.11742No protein-
 
lncRNA
---
LINC00511-205ENST00000578206.21732No protein-
 
lncRNA
--TSL:3
LINC00511-201ENST00000453722.61716No protein-
 
lncRNA
--TSL:2
LINC00511-227ENST00000648069.11713No protein-
 
lncRNA
--GENCODE basic
LINC00511-218ENST00000647593.11690No protein-
 
lncRNA
---
LINC00511-266ENST00000649489.11682No protein-
 
lncRNA
---
LINC00511-230ENST00000648176.21647No protein-
 
lncRNA
---
LINC00511-202ENST00000457958.71626No protein-
 
lncRNA
--TSL:1
LINC00511-236ENST00000648403.11556No protein-
 
lncRNA
--GENCODE basic
LINC00511-260ENST00000649343.11552No protein-
 
lncRNA
---
LINC00511-306ENST00000650602.21510No protein-
 
lncRNA
--GENCODE basic
LINC00511-233ENST00000648248.11468No protein-
 
lncRNA
---
LINC00511-296ENST00000650423.11455No protein-
 
lncRNA
---
LINC00511-241ENST00000648522.11351No protein-
 
lncRNA
---
LINC00511-281ENST00000650083.11329No protein-
 
lncRNA
---
LINC00511-229ENST00000648104.21264No protein-
 
lncRNA
---
LINC00511-270ENST00000649597.11206No protein-
 
lncRNA
---
LINC00511-298ENST00000650482.11202No protein-
 
lncRNA
---
LINC00511-265ENST00000649440.21159No protein-
 
lncRNA
---
LINC00511-290ENST00000650227.11126No protein-
 
lncRNA
---
LINC00511-271ENST00000649614.11098No protein-
 
lncRNA
---
LINC00511-267ENST00000649532.11045No protein-
 
lncRNA
---
LINC00511-263ENST00000649407.11045No protein-
 
lncRNA
---
LINC00511-226ENST00000648054.11027No protein-
 
lncRNA
---
LINC00511-288ENST00000650211.1977No protein-
 
lncRNA
---
LINC00511-286ENST00000650191.1951No protein-
 
lncRNA
---
LINC00511-254ENST00000649197.1937No protein-
 
lncRNA
--GENCODE basic
LINC00511-291ENST00000650289.2862No protein-
 
lncRNA
---
LINC00511-212ENST00000581183.3860No protein-
 
lncRNA
--TSL:3
LINC00511-295ENST00000650419.1853No protein-
 
lncRNA
---
LINC00511-246ENST00000648672.2841No protein-
 
lncRNA
---
LINC00511-297ENST00000650476.1826No protein-
 
lncRNA
---
LINC00511-268ENST00000649553.1819No protein-
 
lncRNA
---
LINC00511-277ENST00000649936.1796No protein-
 
lncRNA
---
LINC00511-284ENST00000650161.1791No protein-
 
lncRNA
---
LINC00511-256ENST00000649269.1789No protein-
 
lncRNA
---
LINC00511-238ENST00000648428.1780No protein-
 
lncRNA
---
LINC00511-219ENST00000647611.1762No protein-
 
lncRNA
---
LINC00511-287ENST00000650194.2762No protein-
 
lncRNA
---
LINC00511-214ENST00000581801.6749No protein-
 
lncRNA
--TSL:3
LINC00511-231ENST00000648203.1746No protein-
 
lncRNA
---
LINC00511-248ENST00000648907.1736No protein-
 
lncRNA
---
LINC00511-210ENST00000580861.2701No protein-
 
lncRNA
--GENCODE basicTSL:4
LINC00511-301ENST00000650510.1692No protein-
 
lncRNA
---
LINC00511-285ENST00000650180.1691No protein-
 
lncRNA
---
LINC00511-250ENST00000648954.1689No protein-
 
lncRNA
---
LINC00511-208ENST00000580199.7678No protein-
 
lncRNA
--TSL:3
LINC00511-228ENST00000648088.1669No protein-
 
lncRNA
---
LINC00511-232ENST00000648220.1668No protein-
 
lncRNA
---
LINC00511-204ENST00000577828.6656No protein-
 
lncRNA
--TSL:3
LINC00511-304ENST00000650570.1617No protein-
 
lncRNA
---
LINC00511-209ENST00000580500.5561No protein-
 
lncRNA
--TSL:4
LINC00511-203ENST00000577773.2532No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-303ENST00000650554.1514No protein-
 
lncRNA
---
LINC00511-259ENST00000649332.1509No protein-
 
lncRNA
---
LINC00511-247ENST00000648840.1502No protein-
 
lncRNA
---
LINC00511-222ENST00000647735.1496No protein-
 
lncRNA
--GENCODE basic
LINC00511-211ENST00000580948.1475No protein-
 
lncRNA
--TSL:3
LINC00511-269ENST00000649595.2471No protein-
 
lncRNA
---
LINC00511-206ENST00000579631.2448No protein-
 
lncRNA
--TSL:2
LINC00511-293ENST00000650357.1325No protein-
 
lncRNA
---
LINC00511-251ENST00000649013.1266No protein-
 
lncRNA
---
LINC00511-242ENST00000648559.1261No protein-
 
lncRNA
---
LINC00511-300ENST00000650499.1231No protein-
 
lncRNA
---
LINC00511-258ENST00000649330.1230No protein-
 
lncRNA
---
LINC00511-239ENST00000648500.1219No protein-
 
lncRNA
---
LINC00511-207ENST00000580175.2208No protein-
 
lncRNA
--TSL:3
LINC00511-217ENST00000584749.2173No protein-
 
lncRNA
--TSL:3
LINC00511-305ENST00000650600.1117No protein-
 
lncRNA
---
LINC00511-223ENST00000647850.1111No protein-
 
lncRNA
---
LINC00511-282ENST00000650121.1108No protein-
 
lncRNA
---
Description

golgi-specific brefeldin A-resistance factor 1 [Source:MGI Symbol;Acc:MGI:1861607]

Gene Synonyms

1700083E03Rik

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Gbf1-201ENSMUST00000026254.1464501861aaENSMUSP00000026254.8
 
Protein coding
CCDS29873Q6DFZ1 GENCODE basicAPPRIS P1TSL:1
Gbf1-210ENSMUST00000176574.2561187aaENSMUSP00000159271.2
 
Protein coding
-A0A668KLD0 TSL:3CDS 5' and 3' incomplete
Gbf1-203ENSMUST00000175747.2630163aaENSMUSP00000134762.2
 
Nonsense mediated decay
-H3BIX5 TSL:5CDS 5' incomplete
Gbf1-215ENSMUST00000177512.3582117aaENSMUSP00000135850.3
 
Nonsense mediated decay
-H3BLN1 TSL:5CDS 5' incomplete
Gbf1-213ENSMUST00000176992.85981No protein-
 
Processed transcript
--TSL:1
Gbf1-209ENSMUST00000176525.8484No protein-
 
Processed transcript
--TSL:3
Gbf1-207ENSMUST00000176355.2386No protein-
 
Processed transcript
--TSL:3
Gbf1-212ENSMUST00000176853.2340No protein-
 
Processed transcript
--TSL:3
Gbf1-214ENSMUST00000177406.82755No protein-
 
Retained intron
--TSL:1
Gbf1-208ENSMUST00000176422.22383No protein-
 
Retained intron
--TSL:1
Gbf1-216ENSMUST00000236167.22179No protein-
 
Retained intron
---
Gbf1-204ENSMUST00000175868.81202No protein-
 
Retained intron
--TSL:1
Gbf1-211ENSMUST00000176576.2919No protein-
 
Retained intron
--TSL:3
Gbf1-205ENSMUST00000175878.2635No protein-
 
Retained intron
--TSL:3
Gbf1-202ENSMUST00000175706.8612No protein-
 
Retained intron
--TSL:3
Gbf1-206ENSMUST00000176046.2592No protein-
 
Retained intron
--TSL:2
Description

tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]

Gene Synonyms

C1orf34, DEME-6, KIAA0452

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
TTC39A-221ENST00000680483.12718577aaENSP00000505859.1
 
Protein coding
--NM_001297663.2MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT1
TTC39A-212ENST00000447632.62790613aaENSP00000393952.2
 
Protein coding
CCDS72790Q5SRH9-1 -GENCODE basicTSL:1
TTC39A-208ENST00000413473.62718581aaENSP00000406144.2
 
Protein coding
CCDS44143Q5SRH9-4 -GENCODE basicAPPRIS ALT1TSL:1
TTC39A-209ENST00000422925.62712550aaENSP00000388995.2
 
Protein coding
CCDS72789A0A0A0MSH8 -GENCODE basicAPPRIS ALT1TSL:3
TTC39A-201ENST00000262675.112173550aaENSP00000262675.7
 
Protein coding
CCDS72789F6WE04 -GENCODE basicAPPRIS P4TSL:2
TTC39A-204ENST00000371750.92021578aaENSP00000360815.5
 
Protein coding
CCDS44144Q5SRH9-6 -GENCODE basicAPPRIS ALT2TSL:1
TTC39A-203ENST00000371747.71876426aaENSP00000360812.3
 
Protein coding
CCDS76163A0A0A0MRQ0 -GENCODE basicTSL:2
TTC39A-216ENST00000530004.51780221aaENSP00000431228.1
 
Protein coding
CCDS76162Q5SRH9-2 -GENCODE basicTSL:1
TTC39A-202ENST00000262676.96287420aaENSP00000262676.5
 
Protein coding
-Q5SRH9-3 -GENCODE basicTSL:2
TTC39A-211ENST00000439482.62722612aaENSP00000405803.2
 
Protein coding
-A0A0A0MSW9 -GENCODE basicTSL:5
TTC39A-219ENST00000680290.12415585aaENSP00000505465.1
 
Protein coding
---GENCODE basic
TTC39A-207ENST00000411642.6931279aaENSP00000408532.2
 
Protein coding
-E9PAZ4 -TSL:1CDS 3' incomplete
TTC39A-205ENST00000380849.6769188aaENSP00000370230.2
 
Protein coding
-U5GXS1 -TSL:3CDS 3' incomplete
TTC39A-215ENST00000527205.1577168aaENSP00000432453.1
 
Protein coding
-E9PQX3 -TSL:4CDS 3' incomplete
TTC39A-206ENST00000401051.7547158aaENSP00000383830.3
 
Protein coding
-F8W961 -TSL:4CDS 3' incomplete
TTC39A-217ENST00000532836.5519124aaENSP00000434483.1
 
Protein coding
-E9PQ33 -TSL:4CDS 3' incomplete
TTC39A-214ENST00000525906.1429112aaENSP00000436659.1
 
Protein coding
-E9PHX9 -TSL:5CDS 3' incomplete
TTC39A-220ENST00000680460.1243297aaENSP00000505535.1
 
Nonsense mediated decay
----
TTC39A-218ENST00000534098.1930No protein-
 
Processed transcript
---TSL:2
TTC39A-210ENST00000431927.5678No protein-
 
Processed transcript
---TSL:5
TTC39A-213ENST00000524442.1413No protein-
 
Processed transcript
---TSL:3
Description

thyroid hormone receptor associated protein 3 [Source:MGI Symbol;Acc:MGI:2442637]

Gene Synonyms

9330151F09Rik, B230333E16Rik, Trap150

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Thrap3-201ENSMUST00000080919.124378951aaENSMUSP00000079722.6
 
Protein coding
CCDS18645Q569Z6 GENCODE basicAPPRIS P1TSL:1
Thrap3-203ENSMUST00000106142.82744709aaENSMUSP00000101748.2
 
Protein coding
-Q8BZN7 GENCODE basicTSL:1
Thrap3-210ENSMUST00000142125.267327aaENSMUSP00000118414.2
 
Protein coding
-A2AJI7 TSL:3CDS 3' incomplete
Thrap3-215ENSMUST00000163459.8583194aaENSMUSP00000129775.2
 
Protein coding
-F6YH92 TSL:5CDS 5' and 3' incomplete
Thrap3-214ENSMUST00000163306.2407135aaENSMUSP00000126399.2
 
Protein coding
-F6YSQ2 TSL:3CDS 5' and 3' incomplete
Thrap3-206ENSMUST00000130334.237829aaENSMUSP00000120455.2
 
Protein coding
-A2AJI6 TSL:3CDS 3' incomplete
Thrap3-202ENSMUST00000106141.336125aaENSMUSP00000101747.3
 
Protein coding
-E9Q6C5 TSL:3CDS 3' incomplete
Thrap3-208ENSMUST00000136157.835053aaENSMUSP00000120140.2
 
Protein coding
-A2AJI3 TSL:5CDS 3' incomplete
Thrap3-217ENSMUST00000169403.833950aaENSMUSP00000125856.2
 
Protein coding
-E9Q5X3 TSL:3CDS 3' incomplete
Thrap3-204ENSMUST00000123008.869359aaENSMUSP00000131956.2
 
Nonsense mediated decay
-E9Q494 TSL:3
Thrap3-213ENSMUST00000163176.268843aaENSMUSP00000129416.2
 
Nonsense mediated decay
-F7AB07 TSL:3CDS 5' incomplete
Thrap3-209ENSMUST00000140390.22656No protein-
 
Processed transcript
--TSL:1
Thrap3-212ENSMUST00000154702.2609No protein-
 
Processed transcript
--TSL:2
Thrap3-205ENSMUST00000124327.2590No protein-
 
Processed transcript
--TSL:2
Thrap3-218ENSMUST00000169855.2450No protein-
 
Processed transcript
--TSL:3
Thrap3-211ENSMUST00000151728.22238No protein-
 
Retained intron
--TSL:1
Thrap3-207ENSMUST00000130477.2578No protein-
 
Retained intron
--TSL:2
Thrap3-216ENSMUST00000168568.8521No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 3, Coding exons: 3, Transcript length: 407 bps, Translation length: 135 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

CDS 5' and 3' incomplete

Version

ENSMUST00000163306.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x2feae3e8)