Mouse (GRCm39)
Description

TAR DNA binding protein [Source:MGI Symbol;Acc:MGI:2387629]

Gene Synonyms

1190002A23Rik, TDP-43, Tdp43

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 924 variant alleles and maps to 313 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000084125.10Tardbp-2027477414aaENSMUSP00000081142.4
 
Protein coding
CCDS38971Q544R5 Q921F2 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000172073.8Tardbp-2106513304aaENSMUSP00000130963.2
 
Protein coding
CCDS38968Q6VYI4 GENCODE basicTSL:5
ENSMUST00000165113.8Tardbp-2096495298aaENSMUSP00000129342.2
 
Protein coding
CCDS38969Q8BLD4 GENCODE basicTSL:5
ENSMUST00000105702.9Tardbp-2066425302aaENSMUSP00000101327.3
 
Protein coding
CCDS38967Q6VYI5 GENCODE basicTSL:5
ENSMUST00000105699.8Tardbp-2041904295aaENSMUSP00000101324.2
 
Protein coding
CCDS38970Q8R0B4 GENCODE basicTSL:1
ENSMUST00000189048.7Tardbp-2231096298aaENSMUSP00000140364.2
 
Protein coding
CCDS38969Q8BLD4 GENCODE basicTSL:1
ENSMUST00000095719.10Tardbp-2031011304aaENSMUSP00000093386.4
 
Protein coding
CCDS38968Q6VYI4 GENCODE basicTSL:1
ENSMUST00000105700.8Tardbp-205923302aaENSMUSP00000101325.2
 
Protein coding
CCDS38967Q6VYI5 GENCODE basicTSL:1
ENSMUST00000186947.7Tardbp-216818243aaENSMUSP00000140529.2
 
Protein coding
A0A087WR97 TSL:5CDS 3' incomplete
ENSMUST00000186711.2Tardbp-21481419aaENSMUSP00000140057.2
 
Protein coding
A0A087WQ63 TSL:3CDS 5' incomplete
ENSMUST00000190630.7Tardbp-22774885aaENSMUSP00000140385.2
 
Protein coding
A0A087WQX8 TSL:2CDS 5' incomplete
ENSMUST00000185673.2Tardbp-211740149aaENSMUSP00000141010.2
 
Protein coding
A0A087WSE4 TSL:5CDS 3' incomplete
ENSMUST00000185824.7Tardbp-212709200aaENSMUSP00000140110.2
 
Protein coding
A0A087WQA5 TSL:5CDS 5' incomplete
ENSMUST00000187939.7Tardbp-218570128aaENSMUSP00000140928.2
 
Protein coding
A0A087WS74 TSL:5CDS 5' incomplete
ENSMUST00000188488.2Tardbp-22152999aaENSMUSP00000140989.2
 
Protein coding
A0A087WSC6 TSL:5CDS 5' incomplete
ENSMUST00000045180.14Tardbp-2012006298aaENSMUSP00000038113.8
 
Nonsense mediated decay
CCDS38969Q8BLD4 TSL:1
ENSMUST00000188134.7Tardbp-2191773298aaENSMUSP00000139476.2
 
Nonsense mediated decay
CCDS38969Q8BLD4 TSL:5
ENSMUST00000190696.7Tardbp-228141184aaENSMUSP00000139637.2
 
Nonsense mediated decay
A0A087WP57 TSL:5
ENSMUST00000191450.7Tardbp-2301304285aaENSMUSP00000140832.2
 
Nonsense mediated decay
A0A087WRZ5 TSL:5
ENSMUST00000147391.3Tardbp-208101135aaENSMUSP00000140333.2
 
Nonsense mediated decay
A0A087WQT4 TSL:2CDS 5' incomplete
ENSMUST00000140897.8Tardbp-207781140aaENSMUSP00000135135.3
 
Nonsense mediated decay
H3BJV1 TSL:5CDS 5' incomplete
ENSMUST00000190552.7Tardbp-226741175aaENSMUSP00000141052.2
 
Nonsense mediated decay
A0A087WSH7 TSL:5CDS 5' incomplete
ENSMUST00000191378.7Tardbp-229684138aaENSMUSP00000140718.2
 
Nonsense mediated decay
A0A087WRP4 TSL:5CDS 5' incomplete
ENSMUST00000186729.7Tardbp-21567688aaENSMUSP00000139547.2
 
Nonsense mediated decay
A0A087WNY6 TSL:5CDS 5' incomplete
ENSMUST00000190287.2Tardbp-22451778aaENSMUSP00000140859.2
 
Nonsense mediated decay
A0A087WS17 TSL:5CDS 5' incomplete
ENSMUST00000189041.2Tardbp-222908No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000188380.2Tardbp-220731No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000187937.2Tardbp-217629No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000186317.2Tardbp-213358No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000190478.2Tardbp-225370No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,904 bps, Translation length: 295 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38970

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000105699.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.