Mouse (GRCm39)
Description

retinoblastoma binding protein 8, endonuclease [Source:MGI Symbol;Acc:MGI:2442995]

Gene Synonyms

9930104E21Rik, CtIP

Location
About this transcript

This transcript has 19 exons, is annotated with 9 domains and features, is associated with 4939 variant alleles and maps to 283 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000115861.9Rbbp8-2023523893aaENSMUSP00000111527.3
 
Protein coding
CCDS37738Q80YR6 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000047322.8Rbbp8-2013209893aaENSMUSP00000046255.7
 
Protein coding
CCDS37738Q80YR6 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000234499.2Rbbp8-206586118aaENSMUSP00000157079.2
 
Protein coding
A0A3Q4L2U0 CDS 3' incomplete
ENSMUST00000234984.2Rbbp8-2105471612aaENSMUSP00000157008.2
 
Nonsense mediated decay
A0A3Q4EGK0 -
ENSMUST00000235039.2Rbbp8-2113360247aaENSMUSP00000157244.2
 
Nonsense mediated decay
A0A3Q4EGL1 -
ENSMUST00000234616.2Rbbp8-20778126aaENSMUSP00000157098.2
 
Nonsense mediated decay
A0A3Q4EBX2 CDS 5' incomplete
ENSMUST00000234184.2Rbbp8-2053714No protein-
 
Retained intron
--
ENSMUST00000234074.2Rbbp8-2031904No protein-
 
Retained intron
--
ENSMUST00000234766.2Rbbp8-2091736No protein-
 
Retained intron
--
ENSMUST00000234744.2Rbbp8-208857No protein-
 
Retained intron
--
ENSMUST00000234161.2Rbbp8-204679No protein-
 
Retained intron
--
Statistics

Exons: 19, Coding exons: 18, Transcript length: 3,209 bps, Translation length: 893 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80YR6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37738

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000047322.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.