Mouse (GRCm39)
Description

Rho guanine nucleotide exchange factor (GEF) 1 [Source:MGI Symbol;Acc:MGI:1353510]

Gene Synonyms

Lbcl2, Lsc

Location
About this transcript

This transcript has 30 exons, is annotated with 36 domains and features, is associated with 1492 variant alleles and maps to 329 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000098683.11Arhgef1-2023375979aaENSMUSP00000096280.5
 
Protein coding
CCDS52142Q61210-5 Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000117796.8Arhgef1-2043508976aaENSMUSP00000113771.2
 
Protein coding
CCDS52140E9PUF7 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000117419.8Arhgef1-2033214920aaENSMUSP00000113366.2
 
Protein coding
CCDS52141Q61210 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000047873.16Arhgef1-2013212920aaENSMUSP00000046469.10
 
Protein coding
CCDS52141Q61210 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000206508.2Arhgef1-2183195919aaENSMUSP00000146314.2
 
Protein coding
CCDS85239Q61210-2 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000132751.2Arhgef1-2101851616aaENSMUSP00000117008.2
 
Protein coding
F6ZN61 TSL:5CDS 5' incomplete
ENSMUST00000205295.2Arhgef1-215777233aaENSMUSP00000146059.2
 
Protein coding
A0A0U1RPN7 TSL:5CDS 3' incomplete
ENSMUST00000206906.2Arhgef1-219737192aaENSMUSP00000146065.2
 
Protein coding
A0A0U1RPP2 TSL:5CDS 3' incomplete
ENSMUST00000206011.2Arhgef1-216419102aaENSMUSP00000145981.2
 
Protein coding
A0A0U1RPH2 TSL:2CDS 3' incomplete
ENSMUST00000151121.2Arhgef1-214390101aaENSMUSP00000114388.2
 
Protein coding
D3YVJ9 TSL:3CDS 3' incomplete
ENSMUST00000206028.2Arhgef1-21737430aaENSMUSP00000145659.2
 
Protein coding
A0A0U1RNQ2 TSL:3CDS 3' incomplete
ENSMUST00000132786.2Arhgef1-211832No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000129383.2Arhgef1-208351No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000145783.8Arhgef1-2134243No protein-
 
Retained intron
-TSL:5
ENSMUST00000127761.8Arhgef1-2071827No protein-
 
Retained intron
-TSL:2
ENSMUST00000144714.2Arhgef1-2121087No protein-
 
Retained intron
-TSL:3
ENSMUST00000126918.8Arhgef1-206821No protein-
 
Retained intron
-TSL:5
ENSMUST00000129928.2Arhgef1-209777No protein-
 
Retained intron
-TSL:2
ENSMUST00000126484.2Arhgef1-205775No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 30, Coding exons: 29, Transcript length: 3,508 bps, Translation length: 976 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS52140

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000117796.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.