Mouse (GRCm39)
Description

SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:106299]

Gene Synonyms

Btbd12, D16Bwg1016e

Location
About this transcript

This transcript has 14 exons, is associated with 1243 variant alleles and maps to 238 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000040790.14Slx4-20157061565aaENSMUSP00000038871.8
 
Protein coding
CCDS37240Q6P1D7 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000165830.2Slx4-206865288aaENSMUSP00000126047.2
 
Protein coding
F7A9G8 TSL:5CDS 5' and 3' incomplete
ENSMUST00000171762.2Slx4-208715101aaENSMUSP00000131380.2
 
Protein coding
E9Q0M1 TSL:5CDS 3' incomplete
ENSMUST00000171658.2Slx4-20767335aaENSMUSP00000129144.2
 
Protein coding
E9PYE7 TSL:3CDS 3' incomplete
ENSMUST00000156542.8Slx4-205511680aaENSMUSP00000130007.2
 
Nonsense mediated decay
F6R0R3 TSL:1CDS 5' incomplete
ENSMUST00000146569.8Slx4-2044212105aaENSMUSP00000126423.2
 
Nonsense mediated decay
F6XZI3 TSL:1CDS 5' incomplete
ENSMUST00000128980.8Slx4-2022370No protein-
 
Retained intron
-TSL:1
ENSMUST00000145706.2Slx4-2031945No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 14, Coding exons: 3, Transcript length: 5,116 bps, Translation length: 80 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000156542.8

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.