Mouse (GRCm39)
Description

SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:MGI Symbol;Acc:MGI:1859183]

Gene Synonyms

6030401P21Rik, Mharp

Location
About this transcript

This transcript has 17 exons, is annotated with 32 domains and features, is associated with 3537 variant alleles and maps to 231 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000047615.15Smarcal1-2013059910aaENSMUSP00000047589.9
 
Protein coding
CCDS35609Q8BJL0 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000152225.2Smarcal1-2072994910aaENSMUSP00000137833.2
 
Protein coding
CCDS35609Q8BJL0 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000133123.8Smarcal1-203828194aaENSMUSP00000114848.2
 
Protein coding
D3YUX5 TSL:3CDS 3' incomplete
ENSMUST00000145868.8Smarcal1-20557998aaENSMUSP00000120230.2
 
Protein coding
D3Z0J8 TSL:3CDS 3' incomplete
ENSMUST00000150725.8Smarcal1-2064003No protein-
 
Retained intron
-TSL:5
ENSMUST00000136498.8Smarcal1-2042818No protein-
 
Retained intron
-TSL:1
ENSMUST00000156797.8Smarcal1-2092237No protein-
 
Retained intron
-TSL:1
ENSMUST00000152814.8Smarcal1-2081754No protein-
 
Retained intron
-TSL:1
ENSMUST00000126832.2Smarcal1-202542No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,994 bps, Translation length: 910 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BJL0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35609

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000152225.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.