Mouse (GRCm39)
Description

pogo transposable element with ZNF domain [Source:MGI Symbol;Acc:MGI:2442117]

Gene Synonyms

9530006B08Rik

Location
About this transcript

This transcript has 3 exons, is associated with 785 variant alleles and maps to 38 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000249403.1Pogz-21163991425aaENSMUSP00000159753.1
 
Protein coding
-Ensembl CanonicalGENCODE basic
ENSMUST00000107270.9Pogz-20563991409aaENSMUSP00000102891.3
 
Protein coding
CCDS17596B9EIG6 Q8BZH4 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000107269.2Pogz-20459661314aaENSMUSP00000102890.2
 
Protein coding
D3YUW8 GENCODE basicTSL:5
ENSMUST00000042402.12Pogz-20147751400aaENSMUSP00000037523.6
 
Protein coding
CCDS50985Q0VGT3 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000107266.8Pogz-20341001356aaENSMUSP00000102887.2
 
Protein coding
D3YUX1 GENCODE basicTSL:5
ENSMUST00000140397.2Pogz-20951754aaENSMUSP00000122492.2
 
Nonsense mediated decay
F7D0L1 TSL:5CDS 5' incomplete
ENSMUST00000107265.8Pogz-202742No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000125638.2Pogz-206279No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000126235.8Pogz-2072933No protein-
 
Retained intron
-TSL:1
ENSMUST00000142253.2Pogz-210777No protein-
 
Retained intron
-TSL:2
ENSMUST00000132544.2Pogz-208744No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 3, Coding exons: 2, Transcript length: 517 bps, Translation length: 54 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000140397.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.