Mouse (GRCm39)
Description

ATPase type 13A4 [Source:MGI Symbol;Acc:MGI:1924456]

Gene Synonyms

4631413J11Rik, 9330174J19Rik

Location
About this transcript

This transcript has 30 exons, is annotated with 37 domains and features, is associated with 7504 variant alleles and maps to 291 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000182627.8Atp13a4-20842381193aaENSMUSP00000138479.2
 
Protein coding
CCDS49816S4R234 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENSMUST00000057018.15Atp13a4-20240541174aaENSMUSP00000060987.9
 
Protein coding
CCDS59623E9QPP7 GENCODE basicTSL:1
ENSMUST00000039090.9Atp13a4-2012878878aaENSMUSP00000048753.8
 
Protein coding
CCDS49817A0A0R4J0M2 GENCODE basicTSL:1
ENSMUST00000182013.8Atp13a4-203380984aaENSMUSP00000138583.2
 
Nonsense mediated decay
S4R2B9 TSL:1
ENSMUST00000182573.8Atp13a4-2073010576aaENSMUSP00000138700.2
 
Nonsense mediated decay
S4R2M1 TSL:5CDS 5' incomplete
ENSMUST00000182168.8Atp13a4-20555287aaENSMUSP00000138515.2
 
Nonsense mediated decay
S4R262 TSL:5CDS 5' incomplete
ENSMUST00000182676.8Atp13a4-209958No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000182357.2Atp13a4-2061501No protein-
 
Retained intron
-TSL:1
ENSMUST00000182694.2Atp13a4-2101404No protein-
 
Retained intron
-TSL:1
ENSMUST00000182824.2Atp13a4-2111045No protein-
 
Retained intron
-TSL:1
ENSMUST00000182094.2Atp13a4-204356No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 30, Coding exons: 30, Transcript length: 4,238 bps, Translation length: 1,193 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49816

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000182627.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.