Mouse (GRCm39)
Description

retinoic acid receptor, alpha [Source:MGI Symbol;Acc:MGI:97856]

Gene Synonyms

RAR alpha 1, RARalpha1

Location
About this transcript

This transcript has 8 exons, is annotated with 40 domains and features, is associated with 1201 variant alleles and maps to 281 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000068133.10Rara-2013384462aaENSMUSP00000069744.4
 
Protein coding
CCDS36304P11416 Q3U3R3 Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENSMUST00000107473.3Rara-2023238459aaENSMUSP00000103097.3
 
Protein coding
CCDS48905P11416-2 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000164748.8Rara-2073129462aaENSMUSP00000129791.2
 
Protein coding
CCDS36304P11416 Q3U3R3 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000107475.9Rara-2042469462aaENSMUSP00000103099.3
 
Protein coding
CCDS36304P11416 Q3U3R3 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000107474.8Rara-2032380462aaENSMUSP00000103098.2
 
Protein coding
CCDS36304P11416 Q3U3R3 GENCODE basicAPPRIS P4TSL:5
ENSMUST00000139399.2Rara-205356No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000147985.2Rara-206307No protein-
 
Protein coding CDS not defined
-TSL:3
Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,238 bps, Translation length: 459 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11416

CCDS

This transcript is a member of the Mouse CCDS set: CCDS48905

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000107473.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.