Mouse (GRCm39)
Description

protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]

Gene Synonyms

A230092L07Rik, PCDHX

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 32963 variant alleles and maps to 122 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000192677.6Pcdh11x-20590971338aaENSMUSP00000141522.2
 
Protein coding
F6ZNL5 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000113358.10Pcdh11x-20186071320aaENSMUSP00000108985.4
 
Protein coding
CCDS72426B1AZR7 GENCODE basicTSL:5
ENSMUST00000193899.2Pcdh11x-20753941026aaENSMUSP00000141581.2
 
Protein coding
A0A0A6YWK0 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000113364.10Pcdh11x-20244541338aaENSMUSP00000108991.5
 
Protein coding
F6ZNL5 GENCODE basicTSL:5
ENSMUST00000191653.2Pcdh11x-2041491496aaENSMUSP00000141600.2
 
Protein coding
Q2TJH7 TSL:1CDS 5' incomplete
ENSMUST00000195088.6Pcdh11x-20844021128aaENSMUSP00000142050.2
 
Nonsense mediated decay
A0JNT1 TSL:1
ENSMUST00000155223.7Pcdh11x-2031635304aaENSMUSP00000138407.2
 
Nonsense mediated decay
Q2TJH9 TSL:1CDS 5' incomplete
ENSMUST00000192977.2Pcdh11x-2062145No protein-
 
Retained intron
-TSL:NA
Statistics

Exons: 7, Coding exons: 5, Transcript length: 4,402 bps, Translation length: 1,128 residues

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000195088.6

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.