Mouse (GRCm39)
Description

calcium channel, voltage-dependent, P/Q type, alpha 1A subunit [Source:MGI Symbol;Acc:MGI:109482]

Gene Synonyms

Cacnl1a4, Ccha1a, SCA6, alpha1A, nmf352, smrl

Location
About this transcript

This transcript has 5 exons, is associated with 1037 variant alleles and maps to 21 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000238701.2Cacna1a-21383702457aaENSMUSP00000158803.2
 
Protein coding
A0A571BET0 Ensembl CanonicalGENCODE basicAPPRIS ALT2
ENSMUST00000121390.8Cacna1a-20179262368aaENSMUSP00000112436.2
 
Protein coding
CCDS52618P97445 GENCODE basicAPPRIS P2TSL:1
ENSMUST00000122053.2Cacna1a-20275892321aaENSMUSP00000114055.2
 
Protein coding
CCDS57628E9Q1R5 GENCODE basicTSL:1
ENSMUST00000215756.2Cacna1a-21175032321aaENSMUSP00000149242.2
 
Protein coding
A0A1L1SQZ2 TSL:5CDS 5' incomplete
ENSMUST00000238337.2Cacna1a-2122941776aaENSMUSP00000158675.2
 
Protein coding
A0A571BEF0 GENCODE basic
ENSMUST00000153691.2Cacna1a-210549183aaENSMUSP00000158603.2
 
Protein coding
A0A571BE75 TSL:5CDS 5' and 3' incomplete
ENSMUST00000129620.2Cacna1a-2041639No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000130507.2Cacna1a-205249No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000144879.8Cacna1a-2091742No protein-
 
Retained intron
-TSL:1
ENSMUST00000141981.8Cacna1a-2071153No protein-
 
Retained intron
-TSL:2
ENSMUST00000135382.2Cacna1a-2061150No protein-
 
Retained intron
-TSL:1
ENSMUST00000143215.8Cacna1a-208740No protein-
 
Retained intron
-TSL:3
ENSMUST00000126302.2Cacna1a-203597No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,153 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000141981.8

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.