Mouse (GRCm39)
Description

ATPase, Ca++-sequestering [Source:MGI Symbol;Acc:MGI:1889008]

Gene Synonyms

1700121J11Rik, ATP2C1A, D930003G21Rik, PMR1, SPCA

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 2465 variant alleles and maps to 99 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000085133.13Atp2c1-2024665952aaENSMUSP00000082220.7
 
Protein coding
CCDS57698Q3UZR5 Ensembl CanonicalGENCODE basicTSL:1
ENSMUST00000112558.10Atp2c1-2045642918aaENSMUSP00000108177.3
 
Protein coding
CCDS40752Q80XR2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000038118.15Atp2c1-2014876918aaENSMUSP00000039103.8
 
Protein coding
CCDS40752Q80XR2 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000176770.8Atp2c1-2122781926aaENSMUSP00000134764.2
 
Protein coding
H3BIX7 GENCODE basicTSL:5
ENSMUST00000177074.8Atp2c1-2162664887aaENSMUSP00000135646.2
 
Protein coding
H3BL44 GENCODE basicTSL:5
ENSMUST00000163879.9Atp2c1-2052408669aaENSMUSP00000129617.3
 
Protein coding
CCDS57697Q8BMS7 GENCODE basicTSL:1
ENSMUST00000176363.9Atp2c1-2091082230aaENSMUSP00000135170.2
 
Protein coding
H3BJY0 TSL:5CDS 3' incomplete
ENSMUST00000176651.8Atp2c1-210899253aaENSMUSP00000135732.2
 
Protein coding
H3BLC2 TSL:5CDS 3' incomplete
ENSMUST00000176190.8Atp2c1-208823208aaENSMUSP00000135320.2
 
Protein coding
H3BKB1 TSL:5CDS 3' incomplete
ENSMUST00000176036.8Atp2c1-207710177aaENSMUSP00000135010.2
 
Protein coding
H3BJJ5 TSL:5CDS 3' incomplete
ENSMUST00000177334.2Atp2c1-219578111aaENSMUSP00000134902.2
 
Protein coding
H3BJ99 TSL:5CDS 3' incomplete
ENSMUST00000177293.8Atp2c1-2182476786aaENSMUSP00000135802.2
 
Nonsense mediated decay
H3BLI6 TSL:5CDS 5' incomplete
ENSMUST00000112557.9Atp2c1-2031514No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000176960.8Atp2c1-2141072No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000190802.2Atp2c1-221833No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000176787.2Atp2c1-2131449No protein-
 
Retained intron
-TSL:1
ENSMUST00000186495.2Atp2c1-2201413No protein-
 
Retained intron
-TSL:NA
ENSMUST00000177189.8Atp2c1-217939No protein-
 
Retained intron
-TSL:1
ENSMUST00000176656.2Atp2c1-211691No protein-
 
Retained intron
-TSL:3
ENSMUST00000177000.2Atp2c1-215642No protein-
 
Retained intron
-TSL:3
ENSMUST00000175697.2Atp2c1-206255No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 8, Coding exons: 7, Transcript length: 823 bps, Translation length: 208 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 3' incomplete

Version

ENSMUST00000176190.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.